Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00338 ATGGATCCGAGCTTGTTCTGGGGTCATCCTGAAAAGAGAGATTCATGGAGGGCAATCTTGACTTTAGCTTATCAAAGCTTGGGGGTTGTTTATGGGGATTTGAGCACTTCTCCTCTGTATGTGTATAAAAGTGCTTTTGCAGAGAACATTCAGAACTCTGAGACGAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTCATTCCATTACTTAAATATGTGTTCATAGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCATTGCTCTGCCGCCATGCCCGGTTGAGCTCCCTCCCAAATCATCAACTAGCGGATGAGGAGCTTTCTGCATATACAACAGACAGGCCTGAAACTCAAACCACTGCTAATTTTAGTTTTAGTTCTTGTCTGAAATCAACCTTGGAGAAATGTAAAGTTTTGCAGAGAATGTTGCTTGTTCTTGCCTTGATTGGGACTTGCATGGTTATTGGAGATGGAGTCCTCTCTCCAGCAATTTCAGTCTTTTCAGCTGTGTCTGGTCTTGAGTTATCCATGGCTAAGGAACATCACCAATATATTGAAGTCCCTCTAGCATGTGGCATATTAGTGTTCTTATTTGCAATGCAACATTACGGAACGAATCAGGTCGGGTTCCTGTTCGCTCCCGTTGTAATTGTATGGCTTCTATGCATCAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCTCTGGTTTACAAAGCACTCTCCCCATACTACATGTTTAAATTCTTGAAAAAAACGAGAAAGCAAGGCTGGATGGCGTTGGGCGGGATCCTCTTGTGTGTAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCACTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTCTCGTGGTTTATCCGTCCTTAGTTCTTGCGTATATGGGACAAGCTGCTTATCTTTCTCAGCATCATGATCTCGACAACGACCATCGGATTGGATTCTATGTTTCTGTTCCTGAGAAGGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCAGTGGTGGGTAGTCAAGCGATCATCACCGGCACGTTTTCGATCATCAAACAGTGTTCTGCGTTGGGTTGTTTTCCGAGGGTAAAGATCATTCATACGTCTTCGAAAATACATGGCCAGATTTACATTCCCTTAATCAACTGGATACTAATGATATTATGTTTGGCTGTTACCATTGGGTTTAGAGACACGAAACGACTCGGCAATGCAGCAGGGTTGGCAGTTATTGTTGGAAAGAGGGATAGTGAAAGAGATAGGAATAGATGA 1332 42.87 MDPSLFWGHPEKRDSWRAILTLAYQSLGVVYGDLSTSPLYVYKSAFAENIQNSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTTDRPETQTTANFSFSSCLKSTLEKCKVLQRMLLVLALIGTCMVIGDGVLSPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFAMQHYGTNQVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMFKFLKKTRKQGWMALGGILLCVTGSEAMFADLGHFSQFSIKLAFTLVVYPSLVLAYMGQAAYLSQHHDLDNDHRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVIVGKRDSERDRNR 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1576826 1579506 - CmoCh15G003380.1 Cmo15g00338 397846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00338 443 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 432 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo15g00338 443 PANTHER POTASSIUM TRANSPORTER 6 11 432 - -
Cmo15g00338 443 Pfam K+ potassium transporter 24 432 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo15g00338 443 TIGRFAM kup: potassium uptake protein 22 432 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00338 Cmo-Chr15:1576826 Cmo14g00647 Cmo-Chr14:3259642 0 dispersed
Cmo15g00338 Cmo-Chr15:1576826 Cmo04g02846 Cmo-Chr4:20324007 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00338 K03549 - csv:101218141 814.298