Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00369 ATGGCCTCTGATAACCTATCCATCTCCGTCGCCGACGACGAGAACTATGGATTCCGACGAGAGGAGATGTATCAGAGCAAACTCACCGGCACCGTCAGTGCTTATGATCGACACGTATTTCTCTGCTACAAGACTCCGGAGGCCTGGCCCTCGCATCTTGAAGCGTCTGATTCCGATGTCCTCCCTAGACTCCTTTCTGCCGCTCTCAAAGCTCGCAAGGATGATCTCTCTGTGAAGACGAAGCTGACAATATTCTCGGGACGTGAAGAAACTGGATTTTCGGATGGAGATGTGTTGATTTTCCCCGAAATGGTCAAATACAGGGGTTTAGAAGATTCAGATGTAGATGGCTTTGTGGATGATGTGCTTGTGAATGATAAACCCTGGGCATCCAGAGAGCCAGAGGTTTTCACTGGCTCTCATGTGTTTGTGTGTGTTCATGCTAGTCGAGATCGGAGATGTGGTGTCTGTGGACCCATTCTTATTCAAAAGTTTGAGGAGGAGATTGGGTTACGAGGACTAAAGGATCGGGTTTATGTTAGTCCATGTTCACACGTTGGAGGACACAAGTATGCCGGAAACTTGATCATATACCAACCTGGTGTGGATGGGAAAACTACCGGTCATTGGTACGGATATGTAACTCCTGAAGATGTCTCTGAATTGTTTGAACAGCACATTGCAAAGGGCGAAGTCGTGGAAAGGCTTTTGAGAGGGCAAATGGGGACAAATCCTGAGGAAGTCCAAAAGGAAGTTGAACAAAAGCTTCCAAATGGAGAAGATACAAAGAAAAGCAAGGATGAAATTCAAGAAAATGGCGATCAAAGTAAAGTAGAAACAGTAGCAGGTTGTTGCCAGGGCAGTAATGGGTTCACTTGTTGCAGAGACGAAAGTTCAGGGAAAAGTACCAGAATCGAGGAAACATCGAAAGAACCTTCCGAAGACCAAGTTCCAAAAAAGACGAGTAAGTTATCTTGCTGCTGGACAGAAAAATGGGAACAAAGTGAAATTCTTACTGCTGTTGCGGTAATTGGAGCTGTGGCCACTGTCGCTGTTGCCTACAGCATCTACAGGAGATCAGGGTAA 1086 46.13 MASDNLSISVADDENYGFRREEMYQSKLTGTVSAYDRHVFLCYKTPEAWPSHLEASDSDVLPRLLSAALKARKDDLSVKTKLTIFSGREETGFSDGDVLIFPEMVKYRGLEDSDVDGFVDDVLVNDKPWASREPEVFTGSHVFVCVHASRDRRCGVCGPILIQKFEEEIGLRGLKDRVYVSPCSHVGGHKYAGNLIIYQPGVDGKTTGHWYGYVTPEDVSELFEQHIAKGEVVERLLRGQMGTNPEEVQKEVEQKLPNGEDTKKSKDEIQENGDQSKVETVAGCCQGSNGFTCCRDESSGKSTRIEETSKEPSEDQVPKKTSKLSCCWTEKWEQSEILTAVAVIGAVATVAVAYSIYRRSG 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1718277 1721874 + CmoCh15G003690.1 Cmo15g00369 397877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00369 361 Pfam Sucrase/ferredoxin-like 28 239 IPR009737 -
Cmo15g00369 361 SUPERFAMILY Thioredoxin-like 141 244 IPR036249 -
Cmo15g00369 361 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 8 360 IPR009737 -
Cmo15g00369 361 PANTHER ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 32-LIKE 8 360 - -
Cmo15g00369 361 MobiDBLite consensus disorder prediction 299 318 - -
Cmo15g00369 361 MobiDBLite consensus disorder prediction 248 274 - -
Cmo15g00369 361 MobiDBLite consensus disorder prediction 241 275 - -
Cmo15g00369 361 MobiDBLite consensus disorder prediction 295 318 - -
Cmo15g00369 361 CDD TRX_Fd_Sucrase 139 241 IPR009737 -
Cmo15g00369 361 Gene3D Glutaredoxin 139 241 - -
Cmo15g00369 361 Gene3D Glutaredoxin 36 133 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01662 Cmo15g00369 CCT
Cmo04g02813 Cmo15g00369 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01110 Cmo-Chr1:9214896 Cmo15g00369 Cmo-Chr15:1718277 1.70E-104 dispersed
Cmo09g01022 Cmo-Chr9:5451935 Cmo15g00369 Cmo-Chr15:1718277 1.49E-111 dispersed
Cmo11g01662 Cmo-Chr11:11792207 Cmo15g00369 Cmo-Chr15:1718277 1.69E-81 wgd
Cmo15g00369 Cmo-Chr15:1718277 Cmo04g02813 Cmo-Chr4:20178974 1.85E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00369 - - cmo:103498108 629.402