Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00413 ATGGCTGGTAAAGGAGAAGGTCCGGCGATCGGGATCGATCTTGGAACAACTTACTCTTGCGTCGGTGTGTGGCAGCATGATCGAGTTGAGATCATTGCCAACGATCAGGGAAATAGAACGACGCCTTCGTATGTTGCGTTCACCGACAACGAGCGATTGATCGGTGATGCAGCCAAGAATCAAGTCGCCATGAACCCTATCAACACCGTTTTTGATGCTAAGCGTTTAATTGGCCGAAGATTTAGTGATTCATCGGTCCAGAACGATATGATGCATTGGTCTTTCCAAGTCATTGCCGGCCCCAGCGACAAACCAATGATTGTTGTGAACTACAAGGGTGAAGAGAAACAGTTTTCAGCGGAAGAAATCTCTTCTATGATACTCATAAAAATGAAGGAGGTTGCTGAGGCGTATCTGGGCACAACAGTGAAGAATGCCGTTGTCACCGTCCCAGCCTACTTCAACGATTCACAGAGACAGGCCACGAAGGATGCCGGTGTCATTTCGGGTCTTAATGTGATGCGTATCATCAACGAACCAACTGCTGCCGCAATTGCTTATGGTCTGGACAAGAAGTCCAGCAGCTCTGGCGAAAAGAACGTTCTGATTTTTGATTTGGGTGGTGGAACTTTTGATGTTTCATTGCTCACAATCGAAGAAGGGATTTTTGAGGTGAAGGCAACTGCAGGAGACACTCATCTTGGTGGCGAAGATTTTGACAACAGATTAGTTAACCACTTCGTGCAGGAATTCAAGAGAAAGAATAAGAAAGACATTAGTGGAAACCCCAGGGCTCTTAGGAGGTTGAGAACCGCTTGTGAAAGGGCTAAGAGAACCCTTTCCTCCTCTGCTCAAACTACACTTGAGATCGACTCTCTTTTTGAAGGAATTGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAATATGGACCTTTTCAGAAAGTGTATGGAACCTGTTGAGAAGTGCTTGAGAGATGCCAAGATGGACAAAAACAGTGTCGATGACGTTGTTCTTGTTGGTGGCTCCACTAGGATTCCCAAGGTGCAGCAATTATTGCAGGATTTCCTCAATGGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGGGCGGCCGTACAGGCTGCCATCTTGAGCGGTGAGGGTAATGAGAAGGTCCAGGATCTTTTGCTTCTGGATGTCACCCCTCTTTCCCTTGGACTGGAAACAGCCGGTGGTGTGATGACAGTCTTGATTCCAAGGAATACCACCATCCCCACCAAGAAGGAGCAAATTTTCTCTACATACGCTGACAACCAACCTGGTGTTTTGATCCAAGTGTATGAAGGCGAGAGGGCAAGAACTCGTGACAACAATTTGCTTGGAAAATTTGAACTCTCCGGAATCCCTGCAGCCCCCAGAGGCGTTCCCCAGATTACAGTCTGCTTCGACATTGATGCCAATGGTATTCTGAACGTTTCAGCTGAGGATAAAACCACGGGTCAGAAGAACAAGATCACAATCACCAACGACAAGGGGCGGTTGTCGAAGGAGGAGATTGAGAAGATGGTGCACGAAGCAGAGAAATACAAGGCGGACGATGAGGAGCACAAGAAGAAGATCGAAGCTAAAAACTCCTTGGAAAACTTTGCTTATAATATGAGGAACACTGTGAGGGACGGGAAGTTCAGCTCTCAAATGGACCCCGCGGACAAGAAGAAGATCGAGGATGCTATAGAACATGCACTCCAGTGGCTTGACAACAACCAACTTGCCGAGGTGGACGAGATAGAGGATCAAATGAAGGAGCTTCAGAATATTTGCAACCCAATCGTTGCCAAGATTTACCAGGGCGTCGGTGTACCTGGTATGCCTGGTGCTGCTATGGATGACAACTATGTTCCACCTCCGTCTGGTGGAAGCGGCGCCGGTCCTAAAATCGAGGAAGTCGATTAA 1959 47.37 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDNERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQNDMMHWSFQVIAGPSDKPMIVVNYKGEEKQFSAEEISSMILIKMKEVAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSSAQTTLEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVDDVVLVGGSTRIPKVQQLLQDFLNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYADNQPGVLIQVYEGERARTRDNNLLGKFELSGIPAAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVHEAEKYKADDEEHKKKIEAKNSLENFAYNMRNTVRDGKFSSQMDPADKKKIEDAIEHALQWLDNNQLAEVDEIEDQMKELQNICNPIVAKIYQGVGVPGMPGAAMDDNYVPPPSGGSGAGPKIEEVD 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1874588 1877079 - CmoCh15G004130.1 Cmo15g00413 397921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00413 652 MobiDBLite consensus disorder prediction 628 652 - -
Cmo15g00413 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cmo15g00413 652 Gene3D - 546 619 IPR029048 -
Cmo15g00413 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Cmo15g00413 652 Coils Coil 588 608 - -
Cmo15g00413 652 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Cmo15g00413 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Cmo15g00413 652 Gene3D Actin; Chain A, domain 4 235 318 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 58 66 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 337 353 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 396 415 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 36 48 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 209 219 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 146 166 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 369 389 - -
Cmo15g00413 652 PRINTS 70kDa heat shock protein signature 477 493 - -
Cmo15g00413 652 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 628 - -
Cmo15g00413 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cmo15g00413 652 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Cmo15g00413 652 SUPERFAMILY Actin-like ATPase domain 9 191 IPR043129 -
Cmo15g00413 652 Gene3D - 10 384 - -
Cmo15g00413 652 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Cmo15g00413 652 Gene3D - 71 126 - -
Cmo15g00413 652 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cmo15g00413 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cmo15g00413 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cmo15g00413 652 Gene3D - 192 366 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02755 Cmo15g00413 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02755 Cmo-Chr4:19938575 Cmo15g00413 Cmo-Chr15:1874588 0 dispersed
Cmo07g01028 Cmo-Chr7:5088728 Cmo15g00413 Cmo-Chr15:1874588 0 dispersed
Cmo15g00413 Cmo-Chr15:1874588 Cmo15g01353 Cmo-Chr15:9263256 0 dispersed
Cmo15g00410 Cmo-Chr15:1867166 Cmo15g00413 Cmo-Chr15:1874588 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00413 K03283 - csv:101210925 1195.26