Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g00458 | ATGGCTTCCAACACCTTGATGAGCTGCGGCATCGCCACCACCGCTTTCCCTTCAGTTCTTTCCTCCTCTAAGTCTAAATTCGCCACCGGTGTCCCGATTTCTGGCGTCGCCGTCAATGCGTCATCCCGGTTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCTCGCCCCCCGTACCTTGACGGCTCAGCCCCCGGTGATTTTGGCTTCGATCCTCTTCGTCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGGTTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCTGGAGGCCAAGCTACCTACTTGGGGCAGCCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACACCGAGAAGAAGAAGTACCCTGGAGGCGCTTTCGACCCATTGGGCTACTCAAAAGACCCTGTAAAGCTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTAGCTTTCGTCGGAATCTGTGTGCAACAAACGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGATCAATTTCGCCTTGA | 741 | 53.85 | MASNTLMSCGIATTAFPSVLSSSKSKFATGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 2086325 | 2088762 | + | CmoCh15G004580.1 | Cmo15g00458 | 397966 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g00458 | 246 | Gene3D | Chlorophyll a/b binding protein domain | 51 | 237 | - | - | |
Cmo15g00458 | 246 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC | 26 | 237 | - | - | |
Cmo15g00458 | 246 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 26 | 237 | IPR001344 | GO:0009765|GO:0016020 | |
Cmo15g00458 | 246 | Pfam | Chlorophyll A-B binding protein | 57 | 211 | IPR022796 | - | |
Cmo15g00458 | 246 | SUPERFAMILY | Chlorophyll a-b binding protein | 40 | 240 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g02705 | Cmo15g00458 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g01093 | Cmo-Chr7:5721158 | Cmo15g00458 | Cmo-Chr15:2086325 | 1.32E-44 | dispersed | |
Cmo15g00458 | Cmo-Chr15:2086325 | Cmo01g00834 | Cmo-Chr1:4452811 | 5.63E-42 | dispersed | |
Cmo15g00458 | Cmo-Chr15:2086325 | Cmo04g02705 | Cmo-Chr4:19663172 | 1.17E-176 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g00458 | K08907 | - | csv:101211428 | 493.041 |