Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00458 ATGGCTTCCAACACCTTGATGAGCTGCGGCATCGCCACCACCGCTTTCCCTTCAGTTCTTTCCTCCTCTAAGTCTAAATTCGCCACCGGTGTCCCGATTTCTGGCGTCGCCGTCAATGCGTCATCCCGGTTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCTCGCCCCCCGTACCTTGACGGCTCAGCCCCCGGTGATTTTGGCTTCGATCCTCTTCGTCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGGTTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCTGGAGGCCAAGCTACCTACTTGGGGCAGCCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACACCGAGAAGAAGAAGTACCCTGGAGGCGCTTTCGACCCATTGGGCTACTCAAAAGACCCTGTAAAGCTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTAGCTTTCGTCGGAATCTGTGTGCAACAAACGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGATCAATTTCGCCTTGA 741 53.85 MASNTLMSCGIATTAFPSVLSSSKSKFATGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2086325 2088762 + CmoCh15G004580.1 Cmo15g00458 397966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00458 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Cmo15g00458 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 26 237 - -
Cmo15g00458 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 237 IPR001344 GO:0009765|GO:0016020
Cmo15g00458 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Cmo15g00458 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02705 Cmo15g00458 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01093 Cmo-Chr7:5721158 Cmo15g00458 Cmo-Chr15:2086325 1.32E-44 dispersed
Cmo15g00458 Cmo-Chr15:2086325 Cmo01g00834 Cmo-Chr1:4452811 5.63E-42 dispersed
Cmo15g00458 Cmo-Chr15:2086325 Cmo04g02705 Cmo-Chr4:19663172 1.17E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00458 K08907 - csv:101211428 493.041