Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00495 ATGGCAGCGCCAAAGCCTCGTACCACTCGGTCCAGGTCTCACAGGGATGTCCCGGATTTGGAGAAGATGGACGGTGCTTACAGTTGGGACGCCCTCGAATGGACGAAGATTGAGGCCGTTCCGCGGTCGGTTTCGCGTGTTAACTTTGATTGCTTGCTTCAAGCCGAACAAGTGATTGCAGAGGGATATGGTGTTGTTCTTGTAAATACTGATGAGGCGGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGATGTTATTGCCCTTGGCACCATACCACTGGCGGCAATTGATAAATTCAACAAAATAGTTGTGAAGACAAATTCTGTCTCTCGCCAATCTGAAAAGTCTTCATCATCTAGGCGACTTCTTCAGAGGCGTAAAGTATATGATGCATTATTGAAGTGTATGAAACCTGCAAGAATATGGGATCTATATGCATTCAAGTCCGGTCCATCCAAGTATAGTAATACAGACCCAAAACTTCGCTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTACGTGCATCGATGGGTATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTGACATCAATTCCAGTTATACTCTGTGCCAGACTTATCCATTTGCATTAGTTGTTCCAAAACACATTAGTGATGCAGAAATTTTGCAGGCTTCTACCTTTCGTGCTAGATGTCGATTGCCTGTTGTTTCGTGGTGCAATCCTGGTACTGGAGCTGTTCTTGCGCGTTCCTCCCAACCCTTAGTTGGTCTTATGATGAATATGAGAAGTAATACTGATGAAAAGCTTGTTGCTGCACTTTGCTCGTATCTTGTTAGCGTTCAAGGGCCATCACGTAGGAAGCTTTATATAGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCTATGGGTGGTGGGTCGGAGTCTTCGTCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACCCGGCTCAGAGAGTACTTGGATACTCATGGTGAAAAATCATCTGATGGAATGTCATCATTCTTGAGACACGGCGGATGGACTTGGGGTGGGGGTAATCTTAGTAGTATGTCTGCATCTGTATCAACACTGGGAGATAGTGGCTGGTTAATCCATGTTCAAAGTGTCTTGGCTGGTTCCGCATGGATTGCTGCACGTGTTGCGTTGGAAAAAGCAACTGTACTAGTTCATTGCAGATTACCTTGCCATCTTCTTGGTCATTGTTTGCATAGTGATGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTACTTGATCCTTATTACCGGACGATTGCTGGATTTCAGGCACTGGTTGAAAAGGATTGGCTGGCATTTGGTCATCCTTTCTCAGATCGATCTGGCATGCCGACCATATCAGGAAGTGGTAACATGCCATATGAACTCTCTAGGCAGTCTTCAACTGGAAGTTTTTCTACTTCACCTATGCGTCAGCCATCGGGATCATTCACATCTCCAGCTTCCAGTCCTCCTCCCTCACAAACATCAAACAACTGTTCTCCCATATTTTTACAGTGGGTTGATTGTGTTTCTCAACTTTTGCGCATGTATCCCTTTGCTTTCGAGTTCTCTTCAGCATTCCTGGTGGATCTGTTGGATTGTATGCTTTCCTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGGCAGCAATGTGCAGTTTCTGAAGTTTGCGGCTGTATATGGGCGTATTTAGCTGATTTACGAGCTTCGGAAGGAAGTTCGCACGTGCATTACAACCTTTTCTATGATCCTACCAAACATGAAGGTCCACTCTTACCTCCTGCAGCAGCTCTAGCTCCAACTCTCTGGCCACAATTCCATCTTCGTTGGGCTTGCCCTAAAGAATCCCAAGCTGGAGAACTTGAAGTCAGATGCAGGAAAATGGCTATAAAATTCTCTGAAATGCAGAAGGAGAAAGAAATAGCCGAGAGAAAAACGCAAGAGATGACGGCTGCCATGGAATCGATAAAATCAGAGTTACAGAACGAGAAGCAGTTAAGTGTATCTGCTAGGAATATTGCAAAAAGTGCAAACAAAGAATGTGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGTTATTGTACTGTTGACATCGAGGGCGACCTGATGAAATCCAATCAGAAAAATCGTCCTGCTTCGAGAAGGGCTTCGCATCGTTCACTGCCTTCTAGTGAAGACAATGACCTCTCCCTTTCTATCACAGTTACAGAAGATGATGTTCCGAAGGATTCCCCCAGTCACGTCTGCGAAGCTCTTTGCCCATTGCGCACTCACGACAAAGCTTGCCGGTGGCCCGATGCTGGTTGTGCTCATTTGGGTAGCCAATTTATCGGACTAAAGGCAAATTTCGACGCATTCGATCAACTATCCATATATGATGGTTATTTCAAGCCAGAGTGA 2547 44.37 MAAPKPRTTRSRSHRDVPDLEKMDGAYSWDALEWTKIEAVPRSVSRVNFDCLLQAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVIALGTIPLAAIDKFNKIVVKTNSVSRQSEKSSSSRRLLQRRKVYDALLKCMKPARIWDLYAFKSGPSKYSNTDPKLRLLNEYFRLLGKGSLRASMGMIEDGSFTLSNELWRITDINSSYTLCQTYPFALVVPKHISDAEILQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSYLVSVQGPSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALEKATVLVHCRLPCHLLGHCLHSDGWDRTTQLVSLASLLLDPYYRTIAGFQALVEKDWLAFGHPFSDRSGMPTISGSGNMPYELSRQSSTGSFSTSPMRQPSGSFTSPASSPPPSQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDCMLSCRFGNFLCNCEKERQQCAVSEVCGCIWAYLADLRASEGSSHVHYNLFYDPTKHEGPLLPPAAALAPTLWPQFHLRWACPKESQAGELEVRCRKMAIKFSEMQKEKEIAERKTQEMTAAMESIKSELQNEKQLSVSARNIAKSANKECEAIKRAIQSLGCKVQVSSNGYCTVDIEGDLMKSNQKNRPASRRASHRSLPSSEDNDLSLSITVTEDDVPKDSPSHVCEALCPLRTHDKACRWPDAGCAHLGSQFIGLKANFDAFDQLSIYDGYFKPE 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2258207 2270192 + CmoCh15G004950.1 Cmo15g00495 398003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00495 848 SUPERFAMILY PH domain-like 51 156 - -
Cmo15g00495 848 Coils Coil 672 699 - -
Cmo15g00495 848 CDD PTP-MTM-like 243 549 - -
Cmo15g00495 848 PANTHER MYOTUBULARIN-RELATED 19 847 IPR030564 -
Cmo15g00495 848 Gene3D - 63 141 IPR011993 -
Cmo15g00495 848 MobiDBLite consensus disorder prediction 499 531 - -
Cmo15g00495 848 MobiDBLite consensus disorder prediction 754 779 - -
Cmo15g00495 848 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 847 - -
Cmo15g00495 848 SMART gram2001c 43 111 IPR004182 -
Cmo15g00495 848 Pfam Myotubularin-like phosphatase domain 168 589 IPR010569 -
Cmo15g00495 848 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 197 651 IPR029021 -
Cmo15g00495 848 ProSiteProfiles Myotubularin phosphatase domain. 180 647 IPR010569 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00495 K18081 - csv:101204839 1485.32