Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00510 ATGGAGGTCATCGGAGCCGGCGGCGGCGGAGGAGGGGGAGGAGGATCGTCAAACGAAAAACGGCGTCGTTCCTTGACAACAATAACCGCCTCCTTCTTCATCCACGTGGTCACCGGGCCTTGGTTCATGGTGTTCGCTTCATTCCTAATCATGTCCACCGCCGGAACTCCGTACATGTTCGGCCTATACTCCGGCGCCATAAAATCCGTCCTCGGCTATGATCAAAGCACTCTAAACCTAATCAGTTTCTTCAAAGATCTAGGCACGAACGTCGGAGTAATTTCCGGCTTAATCGCGGAAATCACGCCGCCGTGGGTGGTTCTGGCGATAGGTGCGGCGATGAACTTCGTCGGATATTTTATGATTTGGCTGTCGGTGACGGAAAAAGTGGCGGCGCCGGCTGTATGGCTGATGTGTCTTTACATTTGCCTAGGGGCGAATTCGACGGCGTTTGCGAACACCGGCGCGTTGGTGACTTGCGTGAAGAATTACCCGGCGAGGAGAGGCGTGGTTTTGGGGATTTTGAAAGGGTATGTGGGATTGAGCGGCGCGATTTTGACGCAGTTTTATCACGCGATTTATGGCGATGATTCTAAATCGTTGATTCTTCTCATCGCTTGGCTGCCGGCGGTGATTTCTGTCGCGTTTTTGAGAACCATTCGGATTGTGAAGGTCGATCACCACTCTAATGAGCTCAGAGTTTTTTACAGGTTTCTGTATATTTCTCTTGGGCTTGCCGGGTTTCTTACCGTGATGATAATCCTTCAGCAAAAATTCAAATTCTCCCACATCGAGTACAGTTTCAGCGCCGCCGTGGTCGTCCTCCTCCTCTTCTTCCCTGTCTTCGTCGTCATCGCCGAGGACTATAAATTTTGGCGCAGAAAGTTATCTGAATTTCAAAATCCTCCGCCATTCACCATCGTCACCGAAAAACCGCCGCAGTTACCGATCGAACTCGAATCCTATGCAAACGAAGAAGCATCTCGCCTGAAATCCGCCGAAAAACCAGATCTACCAACGCCGTCGTGCTGGAAAACCGCCCTGAATCCGCCGCAGAGAGGGGAAGATTTCACGATTCTACAAGCTCTCTTTAGCGTCGACATGCTCCTCCTGTTTCTCTCCACCGCGTGTGGCGTTGGCGGCACTCTCACCGCTATCGACAACCTCGGCCAAATCGGCGCCTCTCTTCGGTACCCTAAACAGAGCATTAGCACATTCGTATCGTTAGTGAGCATATGGAATTACTTAGGGCGCGTGGTTTCGGGTTTCACCTCTGAATTTTTCCTCACCAAATACAAATTTCCTCGAACCCTAATTCTGACGCTAATCCTCCTCCTCTCTTGCGCCGGCCACCTCCTCATCGCCTTCAATCCCCCCGGCGGCCTCTACATCGCCTCAATCGTCATCGGATTCTGCTACGGCGCCCAATGGCCGATTCTATTCGCCATAATTTCCGAGGTCTTCGGCCTCAAATACTACTCCACGCTCTACAATTTCGGATCCGTCGCGAGTCCGATCGGGTTGTATTTCCTCAACGTTCGAGTCGCCGGTCATTTGTACGACACGGAGGCGAACCGGCAGCTGGCGGCGGCCGGAGAGAAGAGGATAGCCGGAGAAGAGCTGAACTGCGTCGGAGTCGATTGCTTCAAACTGTCGTTCATTATAATCACCGGAGTTACTTTGATTGGGGCTTTGTTTTCGTTCCTTTTGGTTCTCAGAACCAGAGGGTTTTACAAGACTGATATTTATAGGAGGTTTAAAGAAGCGGATGAAGAAGAAGAACAAAACGGCGTCATTGCGAAGGATGAGAGAAATAAGGAAGAAAATAAGTAA 1833 50.95 MEVIGAGGGGGGGGGSSNEKRRRSLTTITASFFIHVVTGPWFMVFASFLIMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGVISGLIAEITPPWVVLAIGAAMNFVGYFMIWLSVTEKVAAPAVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGVVLGILKGYVGLSGAILTQFYHAIYGDDSKSLILLIAWLPAVISVAFLRTIRIVKVDHHSNELRVFYRFLYISLGLAGFLTVMIILQQKFKFSHIEYSFSAAVVVLLLFFPVFVVIAEDYKFWRRKLSEFQNPPPFTIVTEKPPQLPIELESYANEEASRLKSAEKPDLPTPSCWKTALNPPQRGEDFTILQALFSVDMLLLFLSTACGVGGTLTAIDNLGQIGASLRYPKQSISTFVSLVSIWNYLGRVVSGFTSEFFLTKYKFPRTLILTLILLLSCAGHLLIAFNPPGGLYIASIVIGFCYGAQWPILFAIISEVFGLKYYSTLYNFGSVASPIGLYFLNVRVAGHLYDTEANRQLAAAGEKRIAGEELNCVGVDCFKLSFIIITGVTLIGALFSFLLVLRTRGFYKTDIYRRFKEADEEEEQNGVIAKDERNKEENK 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2350179 2353399 - CmoCh15G005100.1 Cmo15g00510 398018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00510 610 MobiDBLite consensus disorder prediction 1 20 - -
Cmo15g00510 610 PANTHER MFS TRANSPORTER 27 606 - -
Cmo15g00510 610 SUPERFAMILY MFS general substrate transporter 238 579 IPR036259 -
Cmo15g00510 610 Gene3D MFS general substrate transporter like domains 360 578 IPR036259 -
Cmo15g00510 610 MobiDBLite consensus disorder prediction 590 610 - -
Cmo15g00510 610 SUPERFAMILY MFS general substrate transporter 43 287 IPR036259 -
Cmo15g00510 610 CDD MFS_Mch1p_like 39 564 - -
Cmo15g00510 610 Pfam Major Facilitator Superfamily 391 574 IPR011701 GO:0022857|GO:0055085
Cmo15g00510 610 Pfam Nodulin-like 40 285 IPR010658 -
Cmo15g00510 610 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 606 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01463 Cmo15g00510 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01463 Cmo-Chr4:7484058 Cmo15g00510 Cmo-Chr15:2350179 0 dispersed
Cmo04g01464 Cmo-Chr4:7489179 Cmo15g00510 Cmo-Chr15:2350179 0 dispersed
Cmo04g01465 Cmo-Chr4:7492582 Cmo15g00510 Cmo-Chr15:2350179 0 dispersed
Cmo15g00510 Cmo-Chr15:2350179 Cmo18g00914 Cmo-Chr18:10319980 0 dispersed
Cmo15g00510 Cmo-Chr15:2350179 Cmo03g01199 Cmo-Chr3:9357600 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00510 - - csv:101208506 955.281