Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00607 ATGGAGCCAAACAAGTTGAATCTAACCAATTTGGAGCGACAATCCGGGTCCGAGATCCAAACCAATGAATTCGACTACTCAAAACGTGCACAATGGCTACGCGCCGCCGTGCTTGGAGCCAACGACGGGCTCGTATCGACCGCGTCGCTTATGATGGGAATCGGAGCTGTGAAACAAGACATCAAAGCCATGATCCTCACCGGGTTTGCCGGGTTGGTCGCCGGTGCGTGTAGCATGGCGATCGGCGAGTTTGTGTCGGTTTACTCACAATTGGACATTGAAGTAGCTCAAATGAAAAGAGAGAAGCTACAAAGAAGAAATTTAGAAGGGCAAGAGCTAGAGAGCAAAGATGATGAGAAGCTACCAAATCCACTCCAAGCCGCCGCAGCCTCCGCCTTGGCGTTCTCCTTAGGAGCAATGGTGCCGTTGTTGGCAGCTTCGTTTATAAGAGATTACAAGGTAAGGCTTGTGGTGGTTGTGGCAGCGGTGACGTTAGCGCTCGCCATGTTCGGGTGGTTGGGTGCCATCCTTGGAAAAGCATCGCCGATCAAATCCGCCATCAGGGTGTTGGTCGGAGGTTGGTTAGCCATGGCTATAACCTTTGGCTTGACGAAACTAATCGGAGTAAGTGGACTCTAG 639 51.49 MEPNKLNLTNLERQSGSEIQTNEFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKLQRRNLEGQELESKDDEKLPNPLQAAAASALAFSLGAMVPLLAASFIRDYKVRLVVVVAAVTLALAMFGWLGAILGKASPIKSAIRVLVGGWLAMAITFGLTKLIGVSGL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2949497 2950135 - CmoCh15G006070.1 Cmo15g00607 398115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00607 212 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 10 209 - -
Cmo15g00607 212 Pfam VIT family 33 110 IPR008217 GO:0005384|GO:0030026
Cmo15g00607 212 Pfam VIT family 113 204 IPR008217 GO:0005384|GO:0030026
Cmo15g00607 212 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 10 209 IPR008217 GO:0005384|GO:0030026
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02580 Cmo15g00607 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g01089 Cmo-Chr9:5974664 Cmo15g00607 Cmo-Chr15:2949497 5.98E-89 dispersed
Cmo15g00607 Cmo-Chr15:2949497 Cmo19g00333 Cmo-Chr19:2796842 3.18E-88 dispersed
Cmo15g00607 Cmo-Chr15:2949497 Cmo04g02561 Cmo-Chr4:18762840 7.91E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00607 K22736 - csv:116402413 335.88