Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00609 ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGCGGAAGCAGAACTCAGACCTTGCTGGCTGGAGCCAGAGGCGGTGTCAATGTCGTTGGCTCTCGCAAGCTTGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGCGGAGGCAACTTAGTCGACCCAGAATGGCTAGATGGCTCACTTCCAGGTGACTTCGGCTTCGACCCATTAGGGTTGGGGAAGGACCCTGCATTTCTGAAATGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCGGTGGTCGGAATCTTCGTAGGCCAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTCGGAACCCAGCTTCTACTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGTTATCCCGGCGGAAAATTCTTCGATCCGTTGGGATTTGCCGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGACAAATTGGAGAGATTGAAGTTGGCTGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGAGTATAA 768 54.95 MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2958942 2960043 - CmoCh15G006090.1 Cmo15g00609 398117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00609 255 Gene3D Chlorophyll a/b binding protein domain 67 254 - -
Cmo15g00609 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 255 IPR001344 GO:0009765|GO:0016020
Cmo15g00609 255 Pfam Chlorophyll A-B binding protein 67 243 IPR022796 -
Cmo15g00609 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 255 - -
Cmo15g00609 255 SUPERFAMILY Chlorophyll a-b binding protein 59 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01491 Cmo-Chr11:10562285 Cmo15g00609 Cmo-Chr15:2958942 8.82E-180 dispersed
Cmo15g00609 Cmo-Chr15:2958942 Cmo11g00756 Cmo-Chr11:3676214 1.94E-37 dispersed
Cmo15g00609 Cmo-Chr15:2958942 Cmo04g01932 Cmo-Chr4:9872268 2.16E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00609 K08917 - csv:101204705 500.36