Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00715 ATGGCATCTGCCATGGCCAAACCCAAAACCCAGACAAAGCTCAGCCGACAAACCCATCAAAACCAGAAACCAAAGCCGCCGTCTTGGGCGGTTGTTAGAGGCATATTCAGCTGCAAGTACCTGCAGCCTCAGCAGCCACAAGAAAAACGACAACAACAGGAACAAGCAACAGAAGAGAGTAGGAAGAACAGTAAGAAAATGAGGTGTTCGGGTTCACTCTGTAACAACACCAAGGTAACGCACGAAGTTCACAAGAACAGGGCATTATCTTCAAGTTCAAGTAGATACTCAAAAGCTCCTCCATTGAACGAACAAAATGGTATTCCATCAGCCACTTGTTCATCATTATCTGCATCATCTTCTTCCAATTCCTCTAGTGGAGCCTCTTTCAGGGGAATGCCATTCAGAAAGTTCTACGGCTGCTACGAATGTAAAATGGTGATAAACCCTGTTAATGGGATGGCTAGAGACCCTTTTCTTAGAGCAACCATTTGGCCCTGTTCTGAATGTGGTGAGGTTTTCATGAAACCTGAAGCTTTGGAGCTTCACAAGAGTGTTAGACATGCAGTGTCTGAACTTGGTCCTGAAGACACGAGCAAGAACATAGTGGAGATTATATTTCAATCAAGCTGGTTGAAAAAACAAACCCCAATTTGCAAAATTGAAAGGATTTTGAAAATCCACAACACTTCAAAAACCATCTCGAGATTCGAGGAATACAGGGACTCCATTAAAGGCAAAGCCATCAAGCTTTCAAAGAAGCACCCACGTTGCATAGCAGATGGTAACGAACTCCTGAGGTTTCATTGCACGACGTTGGCTTGCTCATTGGGCCTAAATGGCTCTTCTAGCCTCTGTAGTTCAATCCCACAATGCAATGTTTGTAGTATAATCAAGCATGGGTTCAAGGTGGCTGCAGAGGCCACTGGAGGGGACGCAGGGAAGGGTATTCTGACAACTGCCACAAGTGGAAAGGCTCATGACAGTGCTGGAATGTCATTGGACAGCAAAGACAAACGAGCAATGCTGGTTTGTCGGGTAATTGCTGGCAGGGTTAAGAAGAGTTCAGAAAGCAGCGTGGAGGATTATGACTCATTGGCCGGAGAAGCTGGCTTGTATTCCAATCTGGATGAGTTATATGTGTTCAGTCCCAAGGCAATATTGCCTTGTTTTGTTGTCATTTATGGTGGGTTTTAA 1197 44.86 MASAMAKPKTQTKLSRQTHQNQKPKPPSWAVVRGIFSCKYLQPQQPQEKRQQQEQATEESRKNSKKMRCSGSLCNNTKVTHEVHKNRALSSSSSRYSKAPPLNEQNGIPSATCSSLSASSSSNSSSGASFRGMPFRKFYGCYECKMVINPVNGMARDPFLRATIWPCSECGEVFMKPEALELHKSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKIHNTSKTISRFEEYRDSIKGKAIKLSKKHPRCIADGNELLRFHCTTLACSLGLNGSSSLCSSIPQCNVCSIIKHGFKVAAEATGGDAGKGILTTATSGKAHDSAGMSLDSKDKRAMLVCRVIAGRVKKSSESSVEDYDSLAGEAGLYSNLDELYVFSPKAILPCFVVIYGGF 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3476055 3477331 - CmoCh15G007150.1 Cmo15g00715 398223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00715 398 MobiDBLite consensus disorder prediction 1 25 - -
Cmo15g00715 398 ProSitePatterns Zinc finger C2H2 type domain signature. 167 188 IPR013087 -
Cmo15g00715 398 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 395 - -
Cmo15g00715 398 SUPERFAMILY ADP-ribosylation 190 396 - -
Cmo15g00715 398 MobiDBLite consensus disorder prediction 86 129 - -
Cmo15g00715 398 Gene3D - 189 396 - -
Cmo15g00715 398 ProSiteProfiles Zinc finger C2H2 type domain profile. 165 193 IPR013087 -
Cmo15g00715 398 MobiDBLite consensus disorder prediction 1 129 - -
Cmo15g00715 398 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 395 - -
Cmo15g00715 398 MobiDBLite consensus disorder prediction 52 66 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02449 Cmo15g00715 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01211 Cmo-Chr1:9781096 Cmo15g00715 Cmo-Chr15:3476055 1.33E-70 dispersed
Cmo01g02027 Cmo-Chr1:14238762 Cmo15g00715 Cmo-Chr15:3476055 6.27E-79 dispersed
Cmo09g00104 Cmo-Chr9:494843 Cmo15g00715 Cmo-Chr15:3476055 3.28E-110 dispersed
Cmo15g00715 Cmo-Chr15:3476055 Cmo16g00873 Cmo-Chr16:4681672 3.47E-76 dispersed
Cmo15g00715 Cmo-Chr15:3476055 Cmo04g02449 Cmo-Chr4:18141668 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11163 None None None None Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00715 - - bhj:120067077 621.698