Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00736 ATGACTAGAGACCGATGTCGCCTGGGAAAGAAGATGATGGGTAGGGGTGCGGATGGAGGTTGTGGTACTGAGGAGAGGCCTTGTTTAGTGGCACGAGTGCCGAACAGAATAACGTTGGCCCAAACTCAAACACATGAGGAGAAGTTGTGTACTGTGGATATTGATTATTACGCGCAGGCTCAAAAGGCTTTATGTGAGCGTTCGCCATTCGATGTAGCGGAAGAGACTTCAGCTCCTTGTGTGTCTACTTTGCCCAGTAGGTTGGGTAACTTCTTGAGTAGACATACGGGCGGTAAGAAACGGCAGAGGAAATCCAATTCTGGGGCAGACAAGAAGTCTTCTAGACAAGGTGAAAGGTCGCGTGGCTCCAACATTTGGGTTGAGACAGAGGAATATTTTAGAGACTTGACGCTGTCTGATGTAGACACTTTGCGTGCAGCGTCTTCCTTTAGCGGGTTAGTGTCTAGGAAATGTTTTTCAATTCCCTCGTCAGGAAATGTCCCAGAAGCAAATGTAGGTGGCAGTGAGAATGTTAGTGGCGAGAATACGGATGGGGCCATTGTTAAAGACGAGGTTGAGGATGATCGGTTGTGTCCGGATGTGGGCATGGTTGAAGCCAGTGGCTCACTTCTGGAGGACAAGGGTTGTTCGAATTTCGATTCTTCTTGCGGCTTAGAATGGCTTTTAGGCTGTAGGAATAAGGTGTCTCTAACTTCGGAGAGGCCTTCGAAGAAGCGGAAGCTTCTAGGTGGTGACGCAGGGTTGGAAAAAGTTCTGGTTGCTTCTTCTTGCGATGGAAACTCATCTTTATGCCACTTTTGCTCCAAGGGCGGTACTACCAAAGGGTTAAACCCGTTAGTTACTTGCAGTCGTTGTCATGTGGTGGTTCACAAGAAGTGCTATGGAATTAGAGAGAAAGTCAATGGACCCTGGTTGTGTTCTTGGTGTAAGCAGAGGGATGAAATTAATGAATCCACGAAACCCTGTTTGCTCTGTCCCAGGCAGGGTGGTGCTCTGAAACCTGTACACAAAAACGTTGACAGTGGAGTTTCTGTTGAATTTTCTCATTTATTTTGTAGTCAGTGGATGCCAGAGGTATATATAGAGGACTTGACGCAGATGGAGCCTCTTATGAATCTGGGAGGCATAAAAGAAACCCGGAAAAAGTTAGTATGTAACATATGCAAAGTCAAGTATGGAGCCTGTCTTCGTTGCAGCCATGGAACCTGCAGAACCTCCTTTCATCCAATTTGTGCAAGGGAGGCTAGAAATAGAATGGAGGTCTGGGCAAAATATGGGTGTGATAATGTTGAGCTTCGTGCTTTCTGTTCAAAGCACTCTGACAGTTGGGATAGGAGTAGCGGCCAATGTCCTTCTGAAGCTGTTAACAGTAGCTCATATGTTGTCAGCCACCTTCCAGTAACATTGTCAATTAACAGGCCACAAAAATTAGTAGGGAGAAGGAACATTGATAACCTTTTACTCTGTAAGGAGGCTTCTGATACGAATTCTGGAAAATTGGATGGTGGGGAATCAGAAAATATAGGTTCCACTGATCCCAGTTTGAATGCTGATTGTGTTGATACACACAAGTCTACTGTCCAGGGGGTTGAGGATGTTAACCCACTTGACTCCCTTAAACTTGCATCAATTATGAAAAAGTTGATTGATCAAGGAAAAGTGAACGCTAAAGATGTAGCCTCAGAAATTGGCATACCGCCTGATTTATTATGTGCAAAACTTGCTGCTGGCAACCTTGTCCCCGACTTGAAATCCAAAATTGTCCGATGGCTAAGAAGTCATGCTTATATTGGCACCTTGCAGAGAAATTTGAGAGTCAAACTCAAGTCGGCTGTTGCTAAAGCTGTTGATGGATCTGCTGATCGTTCAGACTCATTGTCAGTACCTGATTCTGATAATTCAGACCTTATTGCTAATAAGATGGTTACACTTCGAAGAAAAACTAAAAGCAATATTAGCCATTTGAAGAGTGACGAAATCAAATCTTCATCTGAAGAAACTTTAGGTGGCCATTGTCTAGTTATGCAAAGTGATACCTTGGACCAGCAAGCTTGTGAAGAACAAGGTGATTCAAATAAGGAATGCATCCAAGATGCTGTTATGGTTTGTTCCCAATTGGGTGTACCTGGTTGCTTTGATTTCTTGGCTGATGAACTTATGAAGTATTCAGTTATTGGACAAAGGAATGAATGTTGTTTGTTTATGGAGCATTTAAACGAGCATGATAGTTCTCAAGATACTCCAAGGAATTTGCCAAATGATGTAGAAGGTGATTTCTTGGAGTGTTCTGTTTCTGGCCATAATTCTTCAGTAAGTGCAGTTCATGGAAAGGCTGGAGAGTCCCCTAATTCTTATTTTCATCCATATGTCCAAGAGAAAATGGCACATATGTTGGATGCAAAGCTTCTAAATTTGTCAGAAGGAGAGATGTCATGGCAAGCATCTTCCAGTGCTGGCGTTTGCTGTGGTCACCACAGCCAGCATTTTGACTGCAATGGCACGAGTTACAAATCTGGTGGATTTAATCCAAAGCAGCTAGTCAATAAAAAAATAGGTGGAATCATAAAGTTGTCTCCAGAAGATGAAATTGAAGGAGAAATTATATTTTATCAGCTCAGATTACTTGCAAATGCAGTTTCAAGAAAGCGGTTCACTGACTATTTAATTTGTAACGTTGTTAAGAGTCTTCCAAAGGAGATAAATGAAGCACGAAGTACTAGATGGGATGCTGTTCTTATTAATCAGTATTTTGGTGAGCTTAGAGAAGCAAAGAAACGGGGTAAGAAAGAGAGAAGGCATAAAGAAGCACAGGCTGTACTAGCTGCTGCAACGGCTGCTGCTGCTGCCTCTTCTAGGATGTCATCATTCAGAAAGGATGTATACGAAGAATCTGCTCATAGAGAGTTGATGCCTCGTGCAAAAGAAACACTTACTAAGGTTGCTCTCCCAAAAACTTCATTAGAGTCGGATTTCTGTAAAGAACATGCTAGATCCTGTGACATCTGCAGGCGGCCAGAGACAATGTTAAAGCCAATTTTAGTCTGCGCAAGCTGCAAGGTTTCAGTACATCTGGATTGCTATCGGACTGTTAAAGAGTCCTCAGGTCCATGGTATTGTGAGTTATGTGAAGAATTGGCAGTATCAAGAGGGTCTGGAACTCCAGTAGTCAATTTTTGGGAGAAATCATATTTTGTTGCAGAATGTGGTCTATGTGGTGGCACCACAGGTGCATTCAGGAAATCATCTGACGGCCAGTGGGTTCATGCCGTATGTGCAGAGTGGGTCTTCGAATCAACTTATAAAAGAGGACAAGCAAATCCTGTGGGAGGAATGTGTAATTATGGTCATTGTCAGACCACTTTTCATCCCTTATGCGCTAGAAGTGCTGGATGTTACATGACTGTAAAGACTTCGGGTGGTAAGTTGCAGCACAGAGCATACTGTGAAAAGCATAGCTCAGAGCAGAGAGCAAAGGCTGAGAACCAAACACATGGAATCGAGGAATTGAATAGAGTCAAGCAAATTAGGGTTGAACTTGAGAGGCTACGCCTACTCTGCGAGAGAATCATCAAGCGTGAGAAGATCAAGAGGGACCTGGTTCTGTGTTCACATGATGTTCTTGCTTTTAAAAGAGACCATGTAGCACGATCCGTACTAGTTCACTCTCCTTTCTTCCTACCTGAAGTTAGTTCTGAATCAGCTACCACATCATTAAAGGGGCACGTGGAAGATTTAAAATCGTGCAGCGAAGCTGTGCAGAGATCAGATGATTTAACTGTGGACAGCACAGTTTCCATCAAGCACTGGAACAAAGTACCGTTGTCTTTGGACACTGAACAAAAGACGGACGACGATAGTTCTACATCTCAGAACCCATTCCCCCAAAAATTTGTAGACAGGGGTCAGTTTGCCGGGAAGCAAATACCTCAGAGATCTTCAACTTCTACATCACGTAATCTTGTAGATGTTAGAGGATTGAGGTTCAAGTCTAGAAAGCATGCCGAGACATTTCAGAAAGAGCTGGTAATGACGTCCGACCAAGCATCAATGAAGAATTCTCTTTTACCGAAGCAGTACCTGTATGTTCCTGCTGATGTCCTCGCCAAGGAGAAACAGGTCAACCAGGAAACAGATTTCCACGTCGGACACCAAACATCCATATTCCCGGACCCATATCTTGCTCGGAAACTGAGTCGGAGAACAAATAACATGGCCAATGGAGAAGAGCAGAGCAGCAGCACAGGGGGGAATGCTGGGATGACTCCAGCAGGGCGCCCGAGTTTGACTTGGGCAACGGAAGTGGACGTTGAGTGTAATTGTACAGTTGGATGGCCGCGGGTGTCTGCGACGGTTACCGCGCTCTGCCTCTGCATACGAAACTGCAAGCTCGCGATGGGCTCGATAGACGTCCAATCAACCAATCCTGAAAATGGATCCGACGCCGCCGTTTCTGGTGATGGTCGTCAAAAGCCAGTTTCCGCCGACGGTATGAACCAGACATCTAACGAACCAGAAGGAACTGCGCCCGAGAAGCCTAAAGAATTGGGGCCGACGAAGAAGCGTTTGTCCTCCATGCTTCCGCTTGATGTCGGCACCCGCGTCATGTGCCGTTGGAGGGACGGGAAGTACCATCCCGTTAAGGTTATTGAACGTCGGAAGTTGCAGGCAACTGGTTTTAGTGATTACGAATACTATGTCCATTACACTGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGATTCAGTTGAGACGGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGATTGAAGATGACCCGACACCAGAAGCGGAAGATTGACGAAACCCATGTTGAGGGCCATGAGGAACTCGATGCTGCCAGCTTGAGGGAGCATGAAGAATTTACAAAAGTGAAAAATATTGCAACAATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCCTTTCCGCCAGAGTACAATGACACCACAAAGCTTTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTACAGAGACATATGAGGAAGTGTGATCTGAAGCATCCACCTGGTGATGAAATATATCGATGTGGCACTTTGTCAATGTTTGAGGTCGACGGAAAGAAGAACAAGGTTTATGGGCAGAATCTCTGTTACTTAGCAAAGTTATTTCTGGACCACAAGACCCTCTACTATGATGTAGACCTTTTTCTGTTTTATGTCCTGTTTCTGATCTGTTTGGCTATTGGGGATATATATGGGGAATTTGGAGCTAAGTGCCTCGTTGTAGACCCATTGTATCTTTCCAAAGCAAGTCTTTCCATTCCTCACCTTCAAGCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGGACTCCTGAAAGACCTCTTTCTGACCTTGGATTGGTGAGCTACAGAGGGTACTGGACCAGAGTTCTTTTAGACATCTTGAAAAAGCACAAGGCCAATATCTCTATCAAGGAGCTAAGTGACATGACAGCTATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGACAGCATGTTATATGTGCCGACCCCAAGGTGCTGGATCGTCATCTCAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAGGGTTGA 5733 44.44 MTRDRCRLGKKMMGRGADGGCGTEERPCLVARVPNRITLAQTQTHEEKLCTVDIDYYAQAQKALCERSPFDVAEETSAPCVSTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERSRGSNIWVETEEYFRDLTLSDVDTLRAASSFSGLVSRKCFSIPSSGNVPEANVGGSENVSGENTDGAIVKDEVEDDRLCPDVGMVEASGSLLEDKGCSNFDSSCGLEWLLGCRNKVSLTSERPSKKRKLLGGDAGLEKVLVASSCDGNSSLCHFCSKGGTTKGLNPLVTCSRCHVVVHKKCYGIREKVNGPWLCSWCKQRDEINESTKPCLLCPRQGGALKPVHKNVDSGVSVEFSHLFCSQWMPEVYIEDLTQMEPLMNLGGIKETRKKLVCNICKVKYGACLRCSHGTCRTSFHPICAREARNRMEVWAKYGCDNVELRAFCSKHSDSWDRSSGQCPSEAVNSSSYVVSHLPVTLSINRPQKLVGRRNIDNLLLCKEASDTNSGKLDGGESENIGSTDPSLNADCVDTHKSTVQGVEDVNPLDSLKLASIMKKLIDQGKVNAKDVASEIGIPPDLLCAKLAAGNLVPDLKSKIVRWLRSHAYIGTLQRNLRVKLKSAVAKAVDGSADRSDSLSVPDSDNSDLIANKMVTLRRKTKSNISHLKSDEIKSSSEETLGGHCLVMQSDTLDQQACEEQGDSNKECIQDAVMVCSQLGVPGCFDFLADELMKYSVIGQRNECCLFMEHLNEHDSSQDTPRNLPNDVEGDFLECSVSGHNSSVSAVHGKAGESPNSYFHPYVQEKMAHMLDAKLLNLSEGEMSWQASSSAGVCCGHHSQHFDCNGTSYKSGGFNPKQLVNKKIGGIIKLSPEDEIEGEIIFYQLRLLANAVSRKRFTDYLICNVVKSLPKEINEARSTRWDAVLINQYFGELREAKKRGKKERRHKEAQAVLAAATAAAAASSRMSSFRKDVYEESAHRELMPRAKETLTKVALPKTSLESDFCKEHARSCDICRRPETMLKPILVCASCKVSVHLDCYRTVKESSGPWYCELCEELAVSRGSGTPVVNFWEKSYFVAECGLCGGTTGAFRKSSDGQWVHAVCAEWVFESTYKRGQANPVGGMCNYGHCQTTFHPLCARSAGCYMTVKTSGGKLQHRAYCEKHSSEQRAKAENQTHGIEELNRVKQIRVELERLRLLCERIIKREKIKRDLVLCSHDVLAFKRDHVARSVLVHSPFFLPEVSSESATTSLKGHVEDLKSCSEAVQRSDDLTVDSTVSIKHWNKVPLSLDTEQKTDDDSSTSQNPFPQKFVDRGQFAGKQIPQRSSTSTSRNLVDVRGLRFKSRKHAETFQKELVMTSDQASMKNSLLPKQYLYVPADVLAKEKQVNQETDFHVGHQTSIFPDPYLARKLSRRTNNMANGEEQSSSTGGNAGMTPAGRPSLTWATEVDVECNCTVGWPRVSATVTALCLCIRNCKLAMGSIDVQSTNPENGSDAAVSGDGRQKPVSADGMNQTSNEPEGTAPEKPKELGPTKKRLSSMLPLDVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLDSVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLFLICLAIGDIYGEFGAKCLVVDPLYLSKASLSIPHLQAYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG 1910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3602594 3626812 + CmoCh15G007360.1 Cmo15g00736 398244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00736 1910 Coils Coil 1179 1199 - -
Cmo15g00736 1910 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1115 1161 IPR013083 -
Cmo15g00736 1910 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 325 449 IPR013083 -
Cmo15g00736 1910 CDD CBD_MOF_like 1538 1607 - -
Cmo15g00736 1910 Gene3D - 1645 1701 - -
Cmo15g00736 1910 ProSitePatterns Zinc finger PHD-type signature. 271 316 IPR019786 -
Cmo15g00736 1910 Pfam PHD-zinc-finger like domain 328 446 - -
Cmo15g00736 1910 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1645 1906 IPR016181 -
Cmo15g00736 1910 MobiDBLite consensus disorder prediction 1412 1433 - -
Cmo15g00736 1910 ProSiteProfiles Extended PHD (ePHD) domain profile. 326 447 IPR034732 -
Cmo15g00736 1910 SUPERFAMILY FYVE/PHD zinc finger 996 1050 IPR011011 -
Cmo15g00736 1910 Pfam RNA binding activity-knot of a chromodomain 1535 1593 IPR025995 -
Cmo15g00736 1910 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 1644 1905 IPR002717 GO:0004402|GO:0006355|GO:0016573
Cmo15g00736 1910 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 1490 1909 - -
Cmo15g00736 1910 PANTHER HISTONE ACETYLTRANSFERASE 1490 1909 - -
Cmo15g00736 1910 ProSitePatterns Zinc finger PHD-type signature. 1006 1049 IPR019786 -
Cmo15g00736 1910 MobiDBLite consensus disorder prediction 103 118 - -
Cmo15g00736 1910 MobiDBLite consensus disorder prediction 1412 1427 - -
Cmo15g00736 1910 SMART PHD_3 1074 1159 IPR001965 -
Cmo15g00736 1910 SMART PHD_3 391 447 IPR001965 -
Cmo15g00736 1910 SMART PHD_3 270 317 IPR001965 -
Cmo15g00736 1910 SMART PHD_3 1005 1050 IPR001965 -
Cmo15g00736 1910 MobiDBLite consensus disorder prediction 1284 1303 - -
Cmo15g00736 1910 Gene3D - 1526 1644 - -
Cmo15g00736 1910 SMART chromo_7 1549 1608 IPR000953 -
Cmo15g00736 1910 Pfam MOZ/SAS family 1705 1872 IPR002717 GO:0004402|GO:0006355|GO:0016573
Cmo15g00736 1910 MobiDBLite consensus disorder prediction 91 122 - -
Cmo15g00736 1910 SUPERFAMILY Chromo domain-like 1527 1645 IPR016197 -
Cmo15g00736 1910 Pfam MYST family zinc finger domain 1646 1700 IPR040706 -
Cmo15g00736 1910 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 985 1056 IPR013083 -
Cmo15g00736 1910 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 324 IPR013083 -
Cmo15g00736 1910 Gene3D - 1813 1893 IPR036388 -
Cmo15g00736 1910 Gene3D - 1703 1905 - -
Cmo15g00736 1910 Pfam PHD-finger 284 317 - -
Cmo15g00736 1910 Pfam PHD-finger 1018 1050 - -
Cmo15g00736 1910 ProSiteProfiles Zinc finger PHD-type profile. 1003 1052 IPR019787 -
Cmo15g00736 1910 CDD PHD_SF 1005 1049 - -
Cmo15g00736 1910 CDD ePHD 1075 1158 - -
Cmo15g00736 1910 SUPERFAMILY FYVE/PHD zinc finger 261 332 IPR011011 -
Cmo15g00736 1910 MobiDBLite consensus disorder prediction 1476 1528 - -
Cmo15g00736 1910 ProSiteProfiles Zinc finger PHD-type profile. 268 319 IPR019787 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02426 Cmo15g00736 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00736 Cmo-Chr15:3602594 Cmo18g01343 Cmo-Chr18:12712351 6.61E-07 dispersed
Cmo04g02429 Cmo-Chr4:18032803 Cmo15g00736 Cmo-Chr15:3602594 0 transposed
Cmo15g00736 Cmo-Chr15:3602594 Cmo04g02426 Cmo-Chr4:18016868 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11165 PF01853 MOZ_SAS 6.80E-49 CL0257 Cmo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00736 - - bhj:120067860 2259.18