Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00746 ATGGACTCAAGGGGCCATTCCAATGGTGGAGAACTTGAAACAAAAGAGATGGACATTAGAGACCTTTCATCTTCGCGCAACAATACTCAGTATATTCACAAGGTGGGGGTTCCACCGAAGCAAGGTTTCTTCAACGAATTTAAAGCACGAGTGAAGGAGACTTTCTTTGCAGATGAGCCTCTGCGAACCTTCAAGGATCAATCGAAGTCCCGAAAGTTGGCCCTGGGAATTCAGGCTATCTTCCCGATAATTGAATGGGGGAGGAATTACAATCTGACAAAATTAAGAGGAGATATAATTGCTGGACTCACTATTGCAAGTCTCTGTATTCCACAGGATATAGGGTATGCAAAACTTGCTAATTTGGCTCCCCAGTATGGTTTATACTCCAGCTTTGTACCACCACTGGTTTATGCTTTGATGGGTAGCTCTAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGCTGGGAACAATGCTACAAAAGGAGATTGATTACCATACACATCCAGAAGCGTATCTGCGGCTTGCATTTACAGCTACGTTCTTTGCTGGGATCACCCAAGCCACTCTAGGGATGCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCATGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAACTTAAAGGCTTTCTTGGTATTAAAAATTTTACAAAGAAAACAGACATCATCTCTGTTATGCGCTCAGTATTTGAGGCAGCGCATCATGGATGGAACTGGCAGACGATAGTCATTGGAATAGCTTTTCTAAGTTTTCTTCTATTAGCCAAGTATATTGGAAAGAAGAACAAGAGCCTTTTTTGGGTGCCTGCAATTGCTCCATTAATATCAGTCATTCTGTCCACCTTTTTTGTTTACATTACCCATGCAGACCAGAAAGGTGTCGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCTCATCAGTGAAGCAGATCTACTTCACTGGTGAGTACCTCCTTAAAGGGTTCAGGATTGGCGCTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTAGGAACAATGAACGTTATTGGTTCACTGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCGAATGCTATTCTAGCTGCCATCATTATCACTGCTGTGATCAACTTAATTGACATTCAGGCAGCAATTTTGCTTTGGAAGATAGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTTGGTGTGATATTTGCAAATGTTGAGACAGGCCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGGGTTGCCATTCTTGGAAAGATCCCTAGGACCACAGTATACAGGAACACCCAACAGTATCCAGAAGCAACAAGGGTTCCGGGCATTCTCATTGTGAGAGTCGATTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAGCAAATAAAGAAGGCTTATTCAACAAAAACTCAGTTTTTGATTGTTGAGATGTCTCCTGTTACCGACATTGACACTAGCGGAATTCATGCCCTGGAAGAGCTATACAGGAATCTCCAGAAAAGAGACATTCAGCTAGTTTTGGCAAACCCCGGGCCTGTAGTGATTGACAAACTCCATGCATCCGATCTTGCTAATCTGATTGGCGAGGACCATATCTTTCTAACAGTTGCTGAAGCTGTTTCGTCCTGCTCCCCAAAATTGGTGGAAGGGGTCTAG 1977 42.89 MDSRGHSNGGELETKEMDIRDLSSSRNNTQYIHKVGVPPKQGFFNEFKARVKETFFADEPLRTFKDQSKSRKLALGIQAIFPIIEWGRNYNLTKLRGDIIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLVYALMGSSRDIAIGPVAVVSLLLGTMLQKEIDYHTHPEAYLRLAFTATFFAGITQATLGMLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIISVMRSVFEAAHHGWNWQTIVIGIAFLSFLLLAKYIGKKNKSLFWVPAIAPLISVILSTFFVYITHADQKGVAIVKHIEKGINPSSVKQIYFTGEYLLKGFRIGAVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSLTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAAIIITAVINLIDIQAAILLWKIDKFDFVACLGAFFGVIFANVETGLLIAVSISFAKILLQVTRPRVAILGKIPRTTVYRNTQQYPEATRVPGILIVRVDSAIYFSNSNYIKERILRWLADEEEQIKKAYSTKTQFLIVEMSPVTDIDTSGIHALEELYRNLQKRDIQLVLANPGPVVIDKLHASDLANLIGEDHIFLTVAEAVSSCSPKLVEGV 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3662569 3666856 - CmoCh15G007460.1 Cmo15g00746 398254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00746 658 Pfam STAS domain 528 646 IPR002645 -
Cmo15g00746 658 Gene3D STAS domain 507 653 IPR036513 -
Cmo15g00746 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Cmo15g00746 658 PANTHER SULFATE TRANSPORTER 1.3 19 658 - -
Cmo15g00746 658 TIGRFAM sulP: sulfate permease 82 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cmo15g00746 658 PANTHER SULFATE TRANSPORTER 19 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cmo15g00746 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Cmo15g00746 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Cmo15g00746 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Cmo15g00746 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02732 Cmo-Chr4:19784684 Cmo15g00746 Cmo-Chr15:3662569 6.66E-124 dispersed
Cmo15g00746 Cmo-Chr15:3662569 Cmo17g01178 Cmo-Chr17:9479063 0 dispersed
Cmo16g00739 Cmo-Chr16:3688494 Cmo15g00746 Cmo-Chr15:3662569 0 dispersed
Cmo19g00288 Cmo-Chr19:2113518 Cmo15g00746 Cmo-Chr15:3662569 0 transposed
Cmo01g01470 Cmo-Chr1:11419047 Cmo15g00746 Cmo-Chr15:3662569 0 wgd
Cmo15g00746 Cmo-Chr15:3662569 Cmo04g02421 Cmo-Chr4:17976223 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00746 K17470 - csv:101212138 1190.25