Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00767 ATGAAGAGGGAGCTTGAAGAGGATAGATCTACGGCGGATGCTGGCCGGAGGGTTGTAAAAGGGGAGTGTTCTTCAGTGTCCGGTGGGAAACTGAAGATGTGGGAGGAGGAGGAGGAGCAAGACGCTAATGGCGGCGGCGGCGGAATGGATGAGTTGCTTGCTGTTTTGGGATACAAGGTTCGGGCGTCGGACATGGCGGATGTGGCTATGAAGATGGAGCAGTTGGAGATGGTGATGGGAACTGCTCAGGAGGATGGGATTTCTCATCTTGCTTCTGATACTGTTCATTATAATCCTTCTGATCTCTCTGCTTGGGTTCAAAATATGCTTTCTGAATTCAATAATTCCACTAACCCTAACCCCCAATCTTCTCTGTATTCCGATTCTCTCCACCGGATTCAATCCACTACATCGTGTTTGTACGACGACGATTCTGAGTACGATCTGAGCGCCATTCCTGGTGTTGCGCTTCTGCCTCCTAAAGATTCCTCCACAGAAATCGAAACTCATTCTCGTAAGCGATTGAAAATCGGAGGGGAGAGTTCGGGTCATTTATCACCGTCGCCGTCTTCGTCTTCACCGCCGTTTGTTACCACGGCAGGGATTGTATCTGAACCGTCGCGGCCGGTGGTGGTTGTGGGGGAGGATTCGCAAGAGACTGGGATTCAACTTGTTCACGCTTTATTGGCTTGCGCAGAGGCGGTGCAGCAAGAGAATATGAAGCTCGCTGATGCATTGGTGAAGCATATAGGATTTCTAGCGGCGTCGCAAGCCGGCGCTATGAGAAAAGTCGCGACGTATTTCGCCCAAGCCCTAGCTCGTCGGATATACGGAATCTACTCTCCTCAAGACGGGCTATACTCCTCCTACTCCGATCCCTTACAGATGCACTTTTACGAAACCTGTCCGTATCTGAAATTCGCGCATTTCACTGCCAATCAAGCCATTCTCGAAGCGTTCGCGACGGCGGCGAGAGTTCATGTAATCGATTTTAGTCTCAATCAAGGTATGCAGTGGCCGGCGCTGATGCAAGCGCTCGCATTACGTCCTGGAGGTCCGCCGGCGTTTCGATTGACTGGAATTAGCCCGCCGCAGCCGGATAACACGGCGGATTCGTTGCAGCAAGTCGGTTGGAAGTTAGCACAAATGGCAGAGGCCATTGGTGTTGAGTTTGAGTTCAATCACATCGTGTGTAGTAATCTGGAGGATCTCGATCCGGCGGCTCTGAAGATTCGGCCGACGGCGGTGGAGGCGGTGGCGGTTAACTCAGTGTTCGATCTACACCGGTTGTTGGCTCGACCTGGAGCGATAGAGAAGGTTTTGGGGTTGATAAAGACGACGCAGCCGAAGATCGTGACGATTGTGGAACAGGAAGCGAACCACAACGGGCCGATTTTCCTGGACCGGTTTACTGAGGCGTTGCATTATTACTCGAACCTGTTTGACTCGCTCGAGGGGTCATCAATCGGGTTCGAACCCGCGAATGAGGACGTGTTATTGTCCGAGGTTTATTTGGGGAGACAGATTTGCAACGTGGTGGCATGTGAAGGAACGGACCGAGTTGAGCGACACGAGTCATTGACTCAATGGAGAACTCGGATTGAATCGGCCGGGTTTGACCCGGTCCATCTCGGTTCAAACGCGTTCAAGCAGGCTAGTATGCTTTTGGCCCTCTTTGCTGGCGGAGAAGGGTACAGGGTGGAGGAGAATAATGGGTGTTTAATGCTTGGCTGGCACACTCGACCGTTGATTGCCACGTCAGCATGGCAACTCGCTCCCAATGGGTCGAAGTGA 1794 52.23 MKRELEEDRSTADAGRRVVKGECSSVSGGKLKMWEEEEEQDANGGGGGMDELLAVLGYKVRASDMADVAMKMEQLEMVMGTAQEDGISHLASDTVHYNPSDLSAWVQNMLSEFNNSTNPNPQSSLYSDSLHRIQSTTSCLYDDDSEYDLSAIPGVALLPPKDSSTEIETHSRKRLKIGGESSGHLSPSPSSSSPPFVTTAGIVSEPSRPVVVVGEDSQETGIQLVHALLACAEAVQQENMKLADALVKHIGFLAASQAGAMRKVATYFAQALARRIYGIYSPQDGLYSSYSDPLQMHFYETCPYLKFAHFTANQAILEAFATAARVHVIDFSLNQGMQWPALMQALALRPGGPPAFRLTGISPPQPDNTADSLQQVGWKLAQMAEAIGVEFEFNHIVCSNLEDLDPAALKIRPTAVEAVAVNSVFDLHRLLARPGAIEKVLGLIKTTQPKIVTIVEQEANHNGPIFLDRFTEALHYYSNLFDSLEGSSIGFEPANEDVLLSEVYLGRQICNVVACEGTDRVERHESLTQWRTRIESAGFDPVHLGSNAFKQASMLLALFAGGEGYRVEENNGCLMLGWHTRPLIATSAWQLAPNGSK 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3765077 3766870 - CmoCh15G007670.1 Cmo15g00767 398275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00767 597 PANTHER DELLA PROTEIN RGL1 40 590 IPR030006 GO:0003712|GO:0005634
Cmo15g00767 597 MobiDBLite consensus disorder prediction 165 179 - -
Cmo15g00767 597 Gene3D - 48 113 IPR038088 -
Cmo15g00767 597 MobiDBLite consensus disorder prediction 1 47 - -
Cmo15g00767 597 ProSiteProfiles GRAS family profile. 215 590 IPR005202 -
Cmo15g00767 597 MobiDBLite consensus disorder prediction 1 16 - -
Cmo15g00767 597 MobiDBLite consensus disorder prediction 160 196 - -
Cmo15g00767 597 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 590 IPR005202 -
Cmo15g00767 597 SMART DELLA_2 50 123 - -
Cmo15g00767 597 Pfam Transcriptional regulator DELLA protein N terminal 50 117 IPR021914 -
Cmo15g00767 597 Pfam GRAS domain family 224 590 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00394 Cmo-Chr1:1945242 Cmo15g00767 Cmo-Chr15:3765077 0 dispersed
Cmo04g02220 Cmo-Chr4:16591683 Cmo15g00767 Cmo-Chr15:3765077 0 dispersed
Cmo04g03104 Cmo-Chr4:21588625 Cmo15g00767 Cmo-Chr15:3765077 1.89E-103 dispersed
Cmo11g00583 Cmo-Chr11:2811966 Cmo15g00767 Cmo-Chr15:3765077 9.56E-144 dispersed
Cmo14g00833 Cmo-Chr14:4320155 Cmo15g00767 Cmo-Chr15:3765077 0 dispersed
Cmo15g00767 Cmo-Chr15:3765077 Cmo15g01000 Cmo-Chr15:5387954 0 dispersed
Cmo11g00059 Cmo-Chr11:276267 Cmo15g00767 Cmo-Chr15:3765077 1.71E-67 transposed
Cmo18g00884 Cmo-Chr18:10104659 Cmo15g00767 Cmo-Chr15:3765077 4.54E-68 transposed
Cmo07g00810 Cmo-Chr7:3736085 Cmo15g00767 Cmo-Chr15:3765077 2.06E-36 transposed
Cmo15g00767 Cmo-Chr15:3765077 Cmo04g02397 Cmo-Chr4:17862439 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11167 PF03514 GRAS 1.20E-134 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00767 K14494 - csv:101213911 1007.28