Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00783 ATGGAGATGGACAAGAACCAGCCTGAGAATCAACACCTTCTTCAAGAGACCACTAGCTTCACTACCAATGGTGATGCCCCCCGATTGGACGGCGCTGATGATGCCGATGTTACTGTTCCTGATCCTGATGCTGCTGTAGGAACCGACGACGATGTAAAATCTGCCGAGAAATTGGAGAATCAGGAGGAGGGGGAGGAGACGCAAAAGGAGGAGGAGGAGAAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAAGGAGGATGAACCGGATCTTCATTATAATCTCCATACGATTCTTGCGGATGTCGATCAGTTTCTGTTAACTCCTCACGGTTCTCGTGATCGAGAGGAAGATTCCACTGTTGAGATTCCGCACTTCATTGACAAATTCTTGGATCTTGTGGATGCGAAGATTGAGCAATACAATAACGCGGAATCGAATGCGAAGGAGAACCAGTGTCGAGTGCCGGAAGATGAGTCGTCGTTTCTCGAAGCGGTTGATCGGATATCGAAGCTGAACACTGCGATTCACGAAATGAAATTGGAAGAGGAGAAGAATTCGTTGATCAATCGCATAGGGAGTACTCAACAGCGAGCGATTTCTTATTTAGAAGAAGAGTTCAGGTTCTTTCTCGAGGAATCCAAAAATAGAGATGTGGATGTTGACGATACGAAAGGAGATCGTTGTGGAGTACCAGAAGCTGAACCCGATCATCAACAGATTCCAGTTTACTCCAACGAGATCTTGAGCTATTTGAAAAAAATCGCCAATCAAATGATTTCCGGTGGATACGAATCGGAATGCTACCATGTCTACATCGTTGCGAGAAGAAACAAATTCGAAGAGGCCTTGTTGAACCTAGGGTTCGAGAAACACAGCATCGATGATATCCAGAAGATGAGCTGGGAATCAATGGAGTGTGAGATCGGCACATGGATCAGAACCTTCGAGCAATGCACCATCGTTTTGTTCTCTGGCGAACGGAATCTCGCCGAATCTATATTTTCAGCGCATCCTAAGATTTCCGCCAATCTGTTCAACAACCTAACTCACGGCATTGTGATTCAACTGCTAAATTTCTCAGAAGGTGTTGCAATGACGAAACGCTCCGCCGAGAAGTTGTTCAAGCTTCTTGATATGTACGAAGCTCTTCGCGATATGCTCCCAAAAATGGAAAGCTTATTTCCAGAAGAATACGCCGATGAGCTCAGAACAGAGATCGCAACCACTCGAACTCGTCTAGGCGAAGCGGCGATATGCATATTTTGCGATCTCGAAAACTCGATCAGAGCGGACACCGGAAAAATCCCGGTACCAGGCGGCGCCGTTCATCCATTGGCTCGATACACCATTAACTACTTGAAATACGCTTGCGAGTACAGAACCACACTGGAACAGATATTCAAAGAACACGCAAAGATCGAGCGAGCCGATTCAACAAGTCGACCACGTTACGAAGGCGAACAAGCACCGACTTACAACCCTAACTCTGACAATCAATCACCATTCTCCGTGGAACTGATGCGGGTAATGGAGCTCCTGGACTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGACATAGCACTGAGTTCGATTTTCATGATGAACAACGGTCGATACATCTTGCAGAAGATCAAAGGATCTCCAGATATCCACGAACTGGTAGGCGATACGTGGTACAGGAAGAGATCTTCGGATCTTCGTCAATACCACAAGAACTACCAGAGAGAGACGTGGGGGAAATTATTGGGTTATTTGAACCACGAGGGCTTGACCTGGCACGGGAAAGTGAATAAGCCAGTGCTGAAGGAGAGGTTTAAAGGATTCAACGCCCTGTTCGAAGAGATTCACAAAACACAAAGCTCGTGGATCATAAGCGACGAACAGCTCCAGTCGGAGCTCCGAGTATCAATATCGGCGGTGATGATTCCGGCGTACAGATCATTCCTGGCTAGGTTTTCGCAGTACCTGGATCCGGGGAGACAAACAGAGAAATACATTAAGCTTCAGCCTGAAGACATAGAAACCTACATAGATGAACTATTCGACGGGAATCCAACCTCCATGGCAAGAAGGAGAACATAA 2097 46.64 MEMDKNQPENQHLLQETTSFTTNGDAPRLDGADDADVTVPDPDAAVGTDDDVKSAEKLENQEEGEETQKEEEEKEKEEEEEEEEEEKKEDEPDLHYNLHTILADVDQFLLTPHGSRDREEDSTVEIPHFIDKFLDLVDAKIEQYNNAESNAKENQCRVPEDESSFLEAVDRISKLNTAIHEMKLEEEKNSLINRIGSTQQRAISYLEEEFRFFLEESKNRDVDVDDTKGDRCGVPEAEPDHQQIPVYSNEILSYLKKIANQMISGGYESECYHVYIVARRNKFEEALLNLGFEKHSIDDIQKMSWESMECEIGTWIRTFEQCTIVLFSGERNLAESIFSAHPKISANLFNNLTHGIVIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMLPKMESLFPEEYADELRTEIATTRTRLGEAAICIFCDLENSIRADTGKIPVPGGAVHPLARYTINYLKYACEYRTTLEQIFKEHAKIERADSTSRPRYEGEQAPTYNPNSDNQSPFSVELMRVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSPDIHELVGDTWYRKRSSDLRQYHKNYQRETWGKLLGYLNHEGLTWHGKVNKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYIKLQPEDIETYIDELFDGNPTSMARRRT 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3851042 3853138 + CmoCh15G007830.1 Cmo15g00783 398291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00783 698 Coils Coil 55 91 - -
Cmo15g00783 698 MobiDBLite consensus disorder prediction 10 25 - -
Cmo15g00783 698 SUPERFAMILY Cullin repeat-like 159 687 IPR016159 -
Cmo15g00783 698 MobiDBLite consensus disorder prediction 65 89 - -
Cmo15g00783 698 MobiDBLite consensus disorder prediction 1 94 - -
Cmo15g00783 698 MobiDBLite consensus disorder prediction 488 503 - -
Cmo15g00783 698 Coils Coil 134 154 - -
Cmo15g00783 698 MobiDBLite consensus disorder prediction 46 64 - -
Cmo15g00783 698 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 80 697 - -
Cmo15g00783 698 MobiDBLite consensus disorder prediction 481 503 - -
Cmo15g00783 698 Pfam Exo70 exocyst complex subunit 314 684 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo15g00783 698 Gene3D Exocyst complex component Exo70 140 696 - -
Cmo15g00783 698 PANTHER EXOCYST COMPLEX PROTEIN EXO70 80 697 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01668 Cmo-Chr6:11548220 Cmo15g00783 Cmo-Chr15:3851042 0 dispersed
Cmo14g01484 Cmo-Chr14:11958809 Cmo15g00783 Cmo-Chr15:3851042 0 dispersed
Cmo15g00783 Cmo-Chr15:3851042 Cmo13g00835 Cmo-Chr13:7754168 8.57E-111 dispersed
Cmo15g00783 Cmo-Chr15:3851042 Cmo04g02383 Cmo-Chr4:17768187 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00783 K07195 - csv:101206040 1044.65