Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00785 ATGGAGCGCCGGAATCCGCTCCGGCTTTGGTTTACGTCAGCGGTTTTTGTTGTTTTGATGCTCTTTCCTGTAGGAGAGGCGGATCTTGCGTCGGACACGGCGGCGCTGGTGGTGCTTCAGAAAGCTATGGGCGTTCTGAGTCGGACTCGCCGTTGGAACCTTTCCGATGAGAGTCCGTGTTTGTGGCTTGGCGTCACTTGCCGCGGCGGGAGGGTTGCTGAACTGCGGCTTCCTGGCGTTGGACTCGTCGGGCAACTTCCTTTAGGGCTTGGAAATTTGACTCAACTTGAAACCCTATCTCTTCGCTCTAACTTGCTTTCAGGTTCTATTCCATCTGATTTTGCAAACCTCCGTTCCCTCCGGAATCTATACTTGCATCGGAACTCGTTTTCCGGCGAGATTCCTCCGGTTCTGTTCAGTATTCAGAGTCTCGTTCGCCTGAATTTGGCGCACAACAAGTTCGTCGGTTCGATTCCTTCTGGATTCGATAATCTCACGAACTTGAAGGTTCTCAACTTGGAAGAGAATCAACTCGATGGATTCATTCCTGATTTCAACCTTCCCTCGCTCAAGGCTCTCAATGTTTCTTTCAATCGTCTCAACGGCTCAATCCCTACGCAGTTTTCCGATCAACCAGCCAGCGCCTTCGATGGCAACTCTCTCTGCGGGAAGCCACTGAGCCCTTGCGACGGCGAGGAGAAGAAATTATCCACAGGAGCAATCATCGGAATAGTTATCGGAAGTTTGGTTGCATTCTTGATTATAGTTCTGATTTTAATCTTTCTGTACCGAAAGACGAACAGGACTAATCGGTCAGCTGGTGCTCAGACGACGACCTCCGAGAGATTGTCGTCGGAGGTCGATAATGCCGGCGGCGGAAGCGGAGGAATTGGGAGTGAGAGGAATTTGGTGTTCTGTGGGAATGGAGAAAGAACGTTTGATTTGGAGGAACTGTTGAAAGCTTCAGCAGAGGTGCTGGGGAAGGGTTCTTTTGGATCAACTTACCAGGCAGCTCTGGATGTAGGGATGACTGTGGCGGTTAAGAGGTTGAGAGATGTCAAAGTTTCAGAGAAGGAATTCAAGGAGAAGATTGAAAGCTTGGGGATGATGAACCATCAGAACTTGGTTTCCATTAATGGTTACTATTATGGCGGAGATGAGAAGCTGCTGCTGTGTGATTATGTCTCCATGGGAAGCTTATCTGTGCATTTACATGGCAACAAAAGTCCGGGCAGGACTCCATTGAAATGGGAAGCAAGGGCGGGCATTGCGCTCGCAGCCGCTCGGGGGATAACATATCTACATTCTCGACGACCTCCAACCTCCCATGGCAATATAAAGTCTTCAAACATTCTCCTCAATCGATCCCGGACAGCTTGTGTTTCCGACTTCGGCCTCATTCAGATTGCAAGTCCTACATCCACTCCGAACCATATTGCAACCTACCGTGCCCCTGAGGTCACCGATCCTCGAAAAGTATCCTTAAAAGCAGATGTTTACAGTTTCGGTGTAGTAATTCTAGAGCTTTTAACAGGGAAGGCTCCGAACTCGCCAATGCTCAATGACGATGGCATAGACCTCCCACGATGGGTGCACTCGAAGATCGAAGAGAAGAAAACGGCCGAAGTGTTCGATGAGGAGCTGTTAGAATACAAGAATGGCTTGGATGAAATGGTTCAACTTCTACATCTTGCCATGTTGTGTACAGCACCACACCCGGATAGTCGCCCTTCGATGGCGAAGGTGACGAGTCGAATCGATGAAATATATCATTCGATCTTACTGAAAGAACAAGACACGAGCAACGATAAGTTTTATGACGTGGATAGTACTGTTTCTCAGCAATTTTACTCGGCTGATTCAATCATGGTTCCACCTTCAATCTAG 1887 48.7 MERRNPLRLWFTSAVFVVLMLFPVGEADLASDTAALVVLQKAMGVLSRTRRWNLSDESPCLWLGVTCRGGRVAELRLPGVGLVGQLPLGLGNLTQLETLSLRSNLLSGSIPSDFANLRSLRNLYLHRNSFSGEIPPVLFSIQSLVRLNLAHNKFVGSIPSGFDNLTNLKVLNLEENQLDGFIPDFNLPSLKALNVSFNRLNGSIPTQFSDQPASAFDGNSLCGKPLSPCDGEEKKLSTGAIIGIVIGSLVAFLIIVLILIFLYRKTNRTNRSAGAQTTTSERLSSEVDNAGGGSGGIGSERNLVFCGNGERTFDLEELLKASAEVLGKGSFGSTYQAALDVGMTVAVKRLRDVKVSEKEFKEKIESLGMMNHQNLVSINGYYYGGDEKLLLCDYVSMGSLSVHLHGNKSPGRTPLKWEARAGIALAAARGITYLHSRRPPTSHGNIKSSNILLNRSRTACVSDFGLIQIASPTSTPNHIATYRAPEVTDPRKVSLKADVYSFGVVILELLTGKAPNSPMLNDDGIDLPRWVHSKIEEKKTAEVFDEELLEYKNGLDEMVQLLHLAMLCTAPHPDSRPSMAKVTSRIDEIYHSILLKEQDTSNDKFYDVDSTVSQQFYSADSIMVPPSI 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3859017 3862214 - CmoCh15G007850.1 Cmo15g00785 398293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00785 628 MobiDBLite consensus disorder prediction 271 295 - -
Cmo15g00785 628 Gene3D Phosphorylase Kinase; domain 1 299 394 - -
Cmo15g00785 628 Gene3D Ribonuclease Inhibitor 34 141 IPR032675 -
Cmo15g00785 628 ProSiteProfiles Protein kinase domain profile. 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00785 628 MobiDBLite consensus disorder prediction 271 287 - -
Cmo15g00785 628 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Cmo15g00785 628 Gene3D Ribonuclease Inhibitor 142 229 IPR032675 -
Cmo15g00785 628 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Cmo15g00785 628 PANTHER LRR RECEPTOR-LIKE KINASE 15 590 - -
Cmo15g00785 628 Pfam Leucine rich repeat 143 200 IPR001611 GO:0005515
Cmo15g00785 628 Gene3D Transferase(Phosphotransferase) domain 1 395 600 - -
Cmo15g00785 628 Pfam Protein tyrosine and serine/threonine kinase 324 585 IPR001245 GO:0004672|GO:0006468
Cmo15g00785 628 SMART LRR_typ_2 117 141 IPR003591 -
Cmo15g00785 628 SMART LRR_typ_2 165 187 IPR003591 -
Cmo15g00785 628 SMART LRR_typ_2 93 116 IPR003591 -
Cmo15g00785 628 SUPERFAMILY L domain-like 47 209 - -
Cmo15g00785 628 PANTHER OS05G0588300 PROTEIN 15 590 - -
Cmo15g00785 628 SUPERFAMILY Protein kinase-like (PK-like) 324 584 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00844 Cmo-Chr14:4442207 Cmo15g00785 Cmo-Chr15:3859017 0 dispersed
Cmo15g00785 Cmo-Chr15:3859017 Cmo18g00062 Cmo-Chr18:402885 0 dispersed
Cmo15g00785 Cmo-Chr15:3859017 Cmo04g02382 Cmo-Chr4:17762523 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74920 PF07714 PK_Tyr_Ser-Thr 9.40E-35 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00785 - - csv:101206516 970.689