Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00811 ATGAGAGAGAGAGAGAGAAAGAGAGAGAAAGCTCTTGATCTCGGCTGCAACAGCTTCGTTCTTCTCTCTCGCTCTCGTTTTCAGTTGATACTTCCACAGCTTGGGAACAAAGCTGTAATGGCGAGCAGATACTGGATGGTCTCTTTACCTGTTCAAGGCTCCGCCTCTTCCCTATGGAATCGCCTTCAAGAGCAAATCTCCAAGCATTCTTTCGATACTCCTCTATACAGACTCAATGTTCCTAATCTCCGCGTAGGAACGCTGGATTCGCTCCTTTCCCTCAGCGATGATCTTCTCAAGTCGAACAGCTTCGTGGAAGGAGTTTCCCAGAAAATCAAACGGCAGATCGAGGAACTAGAGAAGGTTTCTGGTGTGGAGAGCAATGTTTTGACGGTTGATGGAGTCCCCATAGATTCGTATCTTACTAGGTTTGTGTGGGATGAAGCCAAGTACCCAACAATATCGCCTCTGAGAGACATTGTGGATAACATTCACAGTCAAGTGGCCAAGACTGAGGATGACCTTAAGATTCGCGTTGCTGAGTACAATAATGTGCGGAGTCAACTTAATGCCATTAACAGAAAGCAAAGTGGAAGCTTAGCAGTCCGGGATATTTCCAATCTTGTAAAACCAGAGGACATAATTATCTCAGAACATCTAACAACCCTTCTTGTGGTTGTTCCTAAGTACTCGCAGAAGGAGTGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTATACGAGGATAATGAATATGCCCTTTACTCCGTAACACTCTTTAATCGCGTTGCAGACAATTTCAAAACAAGTGCACGTGAAAAAGGGTTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAAGAGAGTAGAAAACAGGAGTTAGAAAAGTTGGTGCAGGACCAGGAAAGTTTGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGTTTTCATTTCCTGGATGCACTTTTGTGCCGTACGTGTCTTTGCTGAGAGTATCCTGAGATACGGCTTACCACCATCCTTCTTGGCATCTGTTTTGTCACCATCTGTTAAAAGTGAGAAGAAAGTACGATCAATCCTTGAAGGTTTGTGCGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGGAGCGATGGCTGGTCTGGGGGGAGACTCTGATGCACATCCATATGTCTCCTTCACAATCAATCTTGCCTAA 1248 44.47 MRERERKREKALDLGCNSFVLLSRSRFQLILPQLGNKAVMASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRLNVPNLRVGTLDSLLSLSDDLLKSNSFVEGVSQKIKRQIEELEKVSGVESNVLTVDGVPIDSYLTRFVWDEAKYPTISPLRDIVDNIHSQVAKTEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIIISEHLTTLLVVVPKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYSVTLFNRVADNFKTSAREKGFQIREFEYSPEAQESRKQELEKLVQDQESLRSSLLQWSYASYAEVFISWMHFCAVRVFAESILRYGLPPSFLASVLSPSVKSEKKVRSILEGLCDSANSTYWKTEDEVGGAMAGLGGDSDAHPYVSFTINLA 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4021810 4027952 + CmoCh15G008110.1 Cmo15g00811 398319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00811 415 Gene3D - 202 290 - -
Cmo15g00811 415 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 40 415 - -
Cmo15g00811 415 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 40 415 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cmo15g00811 415 Gene3D - 80 351 - -
Cmo15g00811 415 Gene3D Vacuolar atp synthase subunit c; domain 1 44 373 - -
Cmo15g00811 415 SUPERFAMILY Vacuolar ATP synthase subunit C 40 414 IPR036132 GO:0015078|GO:0033180|GO:1902600
Cmo15g00811 415 Pfam V-ATPase subunit C 44 408 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cmo15g00811 415 CDD V-ATPase_C 44 412 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00811 Cmo-Chr15:4021810 Cmo04g02353 Cmo-Chr4:17556423 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00811 K02148 - csv:101221574 706.827