Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00842 ATGGCGCTCTCTGATAAACCCTCTCGCCAATCTCTCATCCCCAACTTCCTCTACTCTTCCTCTTCTTCCACTCGAACCCTCCCCTTGAAGAAGATGCTTCAGTCTCCACCCACTCTCGATGACGTTTCTTCTTATCCTAAGAGCTTTGTCATTCCCGCTCCCAGCGAGCCGTCTAAGAAGATCGAGATGTACTCGCCGGCCTTCTACGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTCACGCACATGGCTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTCGGGGTTTTGCTCAAGGAGCAGGGTGCGAGGGGTTTCTTCAGGGGCTGGGTGCCTACCCTCCTTGGCTACAGTGCACAGGGTGCCTGCAAGTTTGGCTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAGCGAAGTACAAGACCTTGATCTACCTTGCCGGTTCTGCATCTGCTGAGGTGATTGCTGATATTGCACTTTGCCCCTTTGAAGCCGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGACTGTCTGATGGACTTCCCAAATTTGTCAGATCTGAAGGAACACTAGGGTTGTACAAGGGTTTAGTTCCACTATGGGGTCGCCAGATTCCATACACAATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATACAAGTATGCCATTCCCAGGCCAAAAGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTGAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATCGTGTCTCATCCCGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACCGTTGGTGATGCTGTCAAGAAGCTCGGGTTATGGGGTCTCTTCACTCGTGGGCTACCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCTCAATGGGGTATCTACGATGCATTCAAAGTATTTGTTGGACTACCTACCACTGGTGGCCCTGCACCTGTTGCTGCTGAGCTCGCAAAGGCGTGA 1092 49.27 MALSDKPSRQSLIPNFLYSSSSSTRTLPLKKMLQSPPTLDDVSSYPKSFVIPAPSEPSKKIEMYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPVAAELAKA 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4272535 4275794 + CmoCh15G008420.1 Cmo15g00842 398350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00842 363 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cmo15g00842 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cmo15g00842 363 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 360 IPR044677 GO:0005315|GO:1990547
Cmo15g00842 363 Pfam Mitochondrial carrier protein 168 252 IPR018108 -
Cmo15g00842 363 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Cmo15g00842 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Cmo15g00842 363 Gene3D Mitochondrial carrier domain 160 346 IPR023395 -
Cmo15g00842 363 Gene3D Mitochondrial carrier domain 11 159 IPR023395 -
Cmo15g00842 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Cmo15g00842 363 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00024 Cmo-Chr10:137127 Cmo15g00842 Cmo-Chr15:4272535 0 dispersed
Cmo11g00007 Cmo-Chr11:39304 Cmo15g00842 Cmo-Chr15:4272535 1.72E-43 dispersed
Cmo11g01578 Cmo-Chr11:11333119 Cmo15g00842 Cmo-Chr15:4272535 0 dispersed
Cmo11g01793 Cmo-Chr11:12593842 Cmo15g00842 Cmo-Chr15:4272535 6.36E-109 dispersed
Cmo14g00771 Cmo-Chr14:3917356 Cmo15g00842 Cmo-Chr15:4272535 4.50E-16 dispersed
Cmo15g00842 Cmo-Chr15:4272535 Cmo14g02134 Cmo-Chr14:15418963 2.31E-13 dispersed
Cmo15g00842 Cmo-Chr15:4272535 Cmo04g02319 Cmo-Chr4:17230367 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00842 K15102 - csv:101221771 684.1