Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00850 ATGATGTGCTGTGAACTCTGTGGGCTTACATTAAACTCGATAGATAGGAATGATCGGGCAAACGAGTTATCTTCCAGAACGAAGCCCAGATTCCACTGCTGCAACTCGGACCGGAGTTTCCCTTCAAATTTCTTCATCTCTGTGGCCGGCGGCATCCATCGTTTTCCTCATTTCATTCTTCCATATTCGCTGATTATGCCAGACGTGCAAGCTCTTGTGAATGATTTCGTTATCAAGCTTAAGAAGCGTAAAATTGAGGGATCCTTGGCTACTGCGAAGCATACGGCCGAATTGCTTCGTTCTGTCATTTCTCATCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCCGTGGGAAATATTGTGAGGCGTGTTTTGCACATTATTAGAGAGGAGGATCTCTCTCTTACCACGGCTTCTATTGCTGGGTTGAGCTTATCAGCGGTTAGTGATGATGAAGATGACAGTGAAAAAGATGATCACCCGGCCCTCTCAGCCGCTGCTGTTGCAGCTGCGGCAAGAAGCACTTTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCCAACCAAGCGTCTGTTCATCAAACTTCATCATCTGGAGGTGATTCAGAAGGAAAAAGCAAGTCTGCTGATAAAAGTTCGAGGAGTCGGAAACTCAAGCATGATGTAATTGAAGCTGTTAACGAGCTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAGCAAGCAGTTGAGCACATTCATCAAAACGAGGTAATATTAACTCTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCCCGGGTGAACATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCTGTTGGTTTGAATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTCGTTCTAGCTGGAAGTCACAAGTTATGCCCGTTATATCCTCACAATCCTGAAGTTCTACTCAATGAACTGAGGTCCCCATCAGAGCTTCTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGATCCAAAACTGGTTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCTTCACTTGTTAGTTTATTTATCACCGACACTGGTGGCCACAACTCATCATACATGGAGCTGATTGTTGCCTCTTGTTCATCACATATTTGGATTGCAGTTAGCAACACGAGCGAGAAAAACCATGAACTCTAG 1455 45.43 MMCCELCGLTLNSIDRNDRANELSSRTKPRFHCCNSDRSFPSNFFISVAGGIHRFPHFILPYSLIMPDVQALVNDFVIKLKKRKIEGSLATAKHTAELLRSVISHQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDSEKDDHPALSAAAVAAAARSTLRPPSLQTLLEDVPNQASVHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGSKTGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMELIVASCSSHIWIAVSNTSEKNHEL 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4301204 4311596 - CmoCh15G008500.1 Cmo15g00850 398358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00850 484 MobiDBLite consensus disorder prediction 208 226 - -
Cmo15g00850 484 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 119 465 - -
Cmo15g00850 484 SUPERFAMILY NagB/RpiA/CoA transferase-like 54 463 IPR037171 -
Cmo15g00850 484 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 52 118 - -
Cmo15g00850 484 Gene3D - 259 465 IPR042529 -
Cmo15g00850 484 PANTHER BNAA01G32370D PROTEIN 52 118 - -
Cmo15g00850 484 Pfam Initiation factor 2 subunit family 84 454 IPR000649 GO:0044237
Cmo15g00850 484 PANTHER BNAA01G32370D PROTEIN 119 465 - -
Cmo15g00850 484 MobiDBLite consensus disorder prediction 208 241 - -
Cmo15g00850 484 MobiDBLite consensus disorder prediction 227 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00800 Cmo-Chr8:5068338 Cmo15g00850 Cmo-Chr15:4301204 1.18E-21 dispersed
Cmo11g00252 Cmo-Chr11:1242944 Cmo15g00850 Cmo-Chr15:4301204 3.09E-19 dispersed
Cmo11g00254 Cmo-Chr11:1247375 Cmo15g00850 Cmo-Chr15:4301204 5.65E-18 dispersed
Cmo11g00753 Cmo-Chr11:3663689 Cmo15g00850 Cmo-Chr15:4301204 8.48E-16 dispersed
Cmo15g00850 Cmo-Chr15:4301204 Cmo04g02312 Cmo-Chr4:17194349 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00850 K03754 - csv:101220366 701.049