Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00857 ATGGGCAACAAGAAGGGCTGGTTTTATTTAGTCAAGAAGCTTTTCGTTTCAGAGACACAGACAAAGCCTGAGAAGAAGCAAAAGAGGTGGAAATGGGTGTTTGGAAGGATGAGGAACAAGAGACTAGCCACACTGACAGCGCCGTCGCCATCAAAAGCGACGATGAGACGAGAAGAGGAGGAGGAGGAGGAGAGGAAACAGGCTCTTTCTGTGGCCATTGCGACTACCGCAGCGGCCGAAGCGGCAGTTGCAGCAGCTAAGGCTGCTGTTGAGGTTGTGTGGCTCACAGGGACCCCTCAATCTCATCAACAAAATGCTGCAGAAGAACCCTTTAAGCCTCTCAAGAAGGCCCCTCCATCTGATCTTCTTAGGCGTGAAAGGGAAATCCATGAGTTTGCTGCTATTACTATCCAAACCGCTTTCCGTGGCTTCCTTGCGAGAAAGGCATTGAGAGCACTGAAAGGAATAGTGAAGCTACAAGCAATTATTAGAGGGAGAGCTGTTAGGCGCCAAGCCATTGCCACTTTGAAGTGCTTGCAGTCCATCGTTAGCATACAATCACAAGTCTATTCAAATAGGCTTCACCCTCCTCAAAACACTTTCAATTCTCCTGAAACGAAGCAGTTTCAGAGCTTGAGAGATAGGATCATAAAGTTGGATTCCAACGATCAAAGGTGGGATGACAGCCTACTATCAAAAGAAGAAGCCGATGCAGTGTTTTGTAGCAGAAAAGAAGCAGTGGTAAGGAGAGAGCGAGTCAAGGAATACTTGTTCGCCCACAGGAGGTCTACAGAGTCCGAGCGAAAGAAGGTAAGAGGAAGATGGAGATACTGGCTAGACCAATGGGTGGACACCCAGCTCTCCAAAAGCAAAGAACTCGAAGATTTGGACTCCATTTTCACCTCAAATCCAAACCCACCAACAAAAAACACAGAAGAACTCCCCAACCAATCTCCATATCAAAATCCAGCTCTGAAAAAACTGTCCCACCACAAGAAGCAGCGTTCACTGGGGGGCGGAATAGACTCAAACAGCTCATTTTCAAGCTCCCCACTGGTGCCAGCATACATGGCGGCCACTGAATCTGCAAAGGCAAAAGCAAGATCCTTGAGCTCCCCCAAGCTAAGGCCAGCAGGGGGATTGGACAGCTGCTCCGATGGGAACTCGCCGTGCAAGACAAAGCCGCTCTGTTTGGTGACTTCAACGGCGAGTGAGGTCGGAATTAGCAGGGGCAGAAGGGGGCTTCAGCAGCAGAGGTCGCCGGGGTTGAAGGGGCTTCCAGGGCCTACGAGATCAAGCAGAACTCTCAGTAAGGATTTGAGCATTGATTCTGAGCATTCCTTGCCAAACTGGGATAGACAAAGTGCCTTCCGATGA 1377 49.53 MGNKKGWFYLVKKLFVSETQTKPEKKQKRWKWVFGRMRNKRLATLTAPSPSKATMRREEEEEEERKQALSVAIATTAAAEAAVAAAKAAVEVVWLTGTPQSHQQNAAEEPFKPLKKAPPSDLLRREREIHEFAAITIQTAFRGFLARKALRALKGIVKLQAIIRGRAVRRQAIATLKCLQSIVSIQSQVYSNRLHPPQNTFNSPETKQFQSLRDRIIKLDSNDQRWDDSLLSKEEADAVFCSRKEAVVRRERVKEYLFAHRRSTESERKKVRGRWRYWLDQWVDTQLSKSKELEDLDSIFTSNPNPPTKNTEELPNQSPYQNPALKKLSHHKKQRSLGGGIDSNSSFSSSPLVPAYMAATESAKAKARSLSSPKLRPAGGLDSCSDGNSPCKTKPLCLVTSTASEVGISRGRRGLQQQRSPGLKGLPGPTRSSRTLSKDLSIDSEHSLPNWDRQSAFR 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4345006 4348699 - CmoCh15G008570.1 Cmo15g00857 398365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00857 458 MobiDBLite consensus disorder prediction 366 387 - -
Cmo15g00857 458 PANTHER IQ-DOMAIN 11 5 444 - -
Cmo15g00857 458 PANTHER IQ-DOMAIN 5-RELATED 5 444 - -
Cmo15g00857 458 MobiDBLite consensus disorder prediction 430 458 - -
Cmo15g00857 458 Coils Coil 52 72 - -
Cmo15g00857 458 MobiDBLite consensus disorder prediction 408 458 - -
Cmo15g00857 458 MobiDBLite consensus disorder prediction 296 345 - -
Cmo15g00857 458 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
Cmo15g00857 458 Gene3D - 130 180 - -
Cmo15g00857 458 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Cmo15g00857 458 MobiDBLite consensus disorder prediction 297 324 - -
Cmo15g00857 458 Pfam IQ calmodulin-binding motif 133 151 IPR000048 GO:0005515
Cmo15g00857 458 Pfam Protein of unknown function (DUF4005) 344 411 IPR025064 -
Cmo15g00857 458 MobiDBLite consensus disorder prediction 43 65 - -
Cmo15g00857 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 172 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g02013 Cmo-Chr1:14175837 Cmo15g00857 Cmo-Chr15:4345006 3.41E-07 dispersed
Cmo14g00555 Cmo-Chr14:2822954 Cmo15g00857 Cmo-Chr15:4345006 3.77E-38 dispersed
Cmo15g00857 Cmo-Chr15:4345006 Cmo04g02721 Cmo-Chr4:19731029 2.65E-37 dispersed
Cmo15g00857 Cmo-Chr15:4345006 Cmo04g02305 Cmo-Chr4:17145811 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00857 - - csv:101203390 719.153