Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00865 ATGGGTGTTGCTGTTGAATCGACTCAGTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGATAGGAAATTGATCGAGCGCCTCCTCAAAACCTCGTCCTATCATGTTACTGTTGTTGATTCCGGCAACAAGGCCTTGGAATTTCTTGGTCTTGTTGGAGATCATGATGATGATGATGATGATGATGATGAACCGGACTCCGAAATCGCTCCCTCAAATCATCATCAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCCTCTGAGAATGTACCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGACGTGAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCACAAGGAATTGA 483 42.03 MGVAVESTQFHVLAVDDSFIDRKLIERLLKTSSYHVTVVDSGNKALEFLGLVGDHDDDDDDDDEPDSEIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 160
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 4388575 4389747 - CmoCh15G008650.1 Cmo15g00865 398373
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00865 160 CDD REC_typeA_ARR 12 148 - -
Cmo15g00865 160 ProSiteProfiles Response regulatory domain profile. 11 153 IPR001789 GO:0000160
Cmo15g00865 160 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 158 - -
Cmo15g00865 160 MobiDBLite consensus disorder prediction 53 76 - -
Cmo15g00865 160 Pfam Response regulator receiver domain 74 147 IPR001789 GO:0000160
Cmo15g00865 160 MobiDBLite consensus disorder prediction 53 67 - -
Cmo15g00865 160 SMART REC_2 10 149 IPR001789 GO:0000160
Cmo15g00865 160 SUPERFAMILY CheY-like 9 149 IPR011006 -
Cmo15g00865 160 Gene3D - 11 159 - -
Cmo15g00865 160 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 158 IPR045279 GO:0009736
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01403 Cmo-Chr7:8052325 Cmo15g00865 Cmo-Chr15:4388575 3.16E-68 dispersed
Cmo14g00521 Cmo-Chr14:2633524 Cmo15g00865 Cmo-Chr15:4388575 9.05E-74 dispersed
Cmo15g00865 Cmo-Chr15:4388575 Cmo04g02298 Cmo-Chr4:17099257 4.36E-88 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11179 PF00072 Response_reg 3.70E-16 CL0304 Cmo TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00865 K14492 - csv:101210839 260.766