Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00910 ATGGCGATGTCCAAAGCATTCTCTGAATCTGATGTTTCTATACATTCCACATTCGCCTCCCGCTATGTCCGGGACTCTGCTCCTCGGTTCACCATCCCCCAAAGCTCCATGTCCAAGGAGGCCGCCTTTCAGATCATCAACGACGAGCTCATGCTGGACGGCAACCCACGTCTCAATTTGGCATCCTTCGTCACCACATGGATGGAGCCCGAATGCGACAAGCTCATCATGGACTCAATCAATAAAAACTACGTCAATATGGACGAGTACCCTGTTACCACCGAGATTCAAAATCGGTGTGTCAACATGATCGCCCATTTATTCAACGCTCCATTGGGAGATTCCGATGTAGCGGTGGGAGCCGGGACGGTGGGGTCGTCAGAGGCCATCATGTTGGCAGGGCTTGCCTTCAAGAGGAAGTGGCAGAGGAAGCGGAAGGGTGAAGGGAAGGCTCATGACAAGCCTAATCTTGTGACGGGTGCCAATGTCCAAGTGTGCTGGGAGAAATTTGGTAGGTACTTTGAAGTGGAGCTGAAGGAAGTGAAGGTGAGAGAAGGGTATTACGTGATGGACCCTGTTGAGGCGGTTGAGATGGTGGATGAGAACACCATTTGCGTTGCAGCCATTTTGGGGTCCACTTATAATGGTGAATTCGAGGATGTGAAGCTGCTGAACGATTTGTTGATGAAGAAGAATAAGGAAAGTGGATGGGATACGCCTATTCATGTGGATGCGGCTAGTGGTGGGTTCATAGCGCCGTTCTTGTATCCAGAGCTGGAATGGGACTTCCGGCTTCCTTTGGTGAAGAGTATCAATGTGAGTGGGCATAAGTATGGGCTTGTGTATGCTGGGATCGGGTGGGTGATTTGGAGAACCAAACAGGATTTGCCGGAAGAACTGATTTTCCACATCGATTACCTTGGAGCTGATCAGCCCACCTTCACTCTCAATTTCTCTAAGGGGTCTAGCCAAATCATAGCTCAATATTACCAACTAATACGCTTGGGTTTTGAGGAAGGGCTGGAGAACACAGGGAGATTCAGCATAGCATCCAAGGACATGGGAGTCCCCGTGGTGGCGTTCAGTCTCAAAGACAGAACTCGCCACGACGAATTTGAGGTGTCAGAAATGTTACGACGGTTCGGGTGGATGGTGCCGGCGTATCCAATGCCAGAGGGGGCCAAGCATGTGTCAGTTCTTCGTGTGGTGATTAGAGAAGATTTCTCTCGCACCCTTGCGGGGCGTCTTGTGCAGGACATCGTGAAGGTTCTGGGAGAGCTAGACAGTCTTCCACCAAATAAGAACATGGGTGCACCGCAGCCCATCTATGTACTCAACCCAAACTACAACCATGTCAAGGCCCATGTACCCCACCCTCCTCAATTAAAATGGCAAAGTAAGAGTGAGGTAATGAATTATAATTGCCAAAAATCTGTACATGGGCCTGGGTTTTCAAAAACCTTCATTCTAATTATGGATGCCACCACCGCCGCCCTGGACTCATCTTTCATGCCGGCGATTTCCACCGGATATTTGGAAGATGCGTTGGTTGATTACAATCCCAAACGACGGCGTTTGGGTCATCATCTTGTTGAATTCGAATTCCCACAGAGGTACTGGAGTTCATTTTGCACATGGGGTGGAGATGCCCTTGAGAGTTTCGATTGGAACAACAACCAAATTGATGATATGAATAATTTTACAGGGAGTGGAAGTGAAAGGAAGAAGAGGAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGAGTAGAAGGGGATATAACCTTAAACGACATAAACAAGAAGATGCTAATGCCTCCGACACGGGCGGTCCGACACCCGGTGGGGGATTTTGCGTGCCGGCCGTACGTAACGGCGGAGGGACGGGGTCTGTCCGGCAAAGCGGTGGTGGCGTTGACGAAAATCCATACTCAAGGAAGGAGAGGGAGCATCACCATTATCAGAACAAAGGGTTAA 1989 49.57 MAMSKAFSESDVSIHSTFASRYVRDSAPRFTIPQSSMSKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVNMDEYPVTTEIQNRCVNMIAHLFNAPLGDSDVAVGAGTVGSSEAIMLAGLAFKRKWQRKRKGEGKAHDKPNLVTGANVQVCWEKFGRYFEVELKEVKVREGYYVMDPVEAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLMKKNKESGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKQDLPEELIFHIDYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEEGLENTGRFSIASKDMGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRVVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMGAPQPIYVLNPNYNHVKAHVPHPPQLKWQSKSEVMNYNCQKSVHGPGFSKTFILIMDATTAALDSSFMPAISTGYLEDALVDYNPKRRRLGHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFTGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4609679 4615712 + CmoCh15G009100.1 Cmo15g00910 398418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00910 662 SUPERFAMILY PLP-dependent transferases 16 427 IPR015424 -
Cmo15g00910 662 PANTHER GLUTAMATE DECARBOXYLASE 1 435 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cmo15g00910 662 PANTHER GLUTAMATE DECARBOXYLASE 1 435 - -
Cmo15g00910 662 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 427 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cmo15g00910 662 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 344 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cmo15g00910 662 Gene3D - 1 65 - -
Cmo15g00910 662 Gene3D - 348 431 - -
Cmo15g00910 662 Gene3D - 66 347 IPR015421 GO:0003824
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02252 Cmo15g00910 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01723 Cmo-Chr2:9849883 Cmo15g00910 Cmo-Chr15:4609679 5.63E-17 dispersed
Cmo15g00910 Cmo-Chr15:4609679 Cmo19g00184 Cmo-Chr19:1187539 2.36E-16 dispersed
Cmo15g00908 Cmo-Chr15:4596553 Cmo15g00910 Cmo-Chr15:4609679 0 proximal
Cmo15g00910 Cmo-Chr15:4609679 Cmo04g02252 Cmo-Chr4:16866801 1.44E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00910 K01580 - csv:101208026 802.742