Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g00963 | ATGGAACGACACGGTGTGGGGCGTGAGGAAAAGCATGACCAGGACGACATGTCGCCAAGGACTCGCTTGACGCTTACTAGACATGAATTGGCAATTGGTTGGCGCTGGTCTGTTGTAACCTTCAGGTATAAGCGAAATGACGACGCTTGCGTGGGGAAAAGATCGTTGCCCGCTTTGGTCAATGCAAACAGGAAGGAATACGAAGGGGAAGTGGTGGAGAGCAAGATGAGTGGCGGTGGCAGTAGCACTTCTCGAAGCACTAGGGATTTGATCTGCCATGCCGGTGCTGGTGCTGCTGCAGGTGCTATAGCAGCCACGTTCGTCTGCCCTTTAGATGTGATCAAGACGAGGCTGCAAGTGCATGGTCTTCCATCTGGTCAAAGAGGAGGTAGTATTATTGTCACTAGCCTACAAGACATAATGCGTTCTGAAGGTTTCAGGGGACTGTACCGTGGCCTTTCACCAACAATATTAGCACTTCTTCCAAACTGGGCTGTCTACTTCACAGTTTATGAGCATCTAAAAGGCATACTTCATTCAGATGGGGACGATGGTCATCAACTCTCGTTCGGCGCAAATATGGTTGCTGCTGCTGGGGCTGGGGGATCTACTGCCACTGCAACAAATCCTTTATGGGTTGTTAAGACCAGACTTCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGCATGGTTTCAGCATTTACCAGGATCATACAGGAAGAAGGAATTCGCGGGCTTTACAGTGGTATCCTCCCTTCATTGGTTGGGATAAGTCATGTTGCCATTCAATTTCCAGCATACGAAAAGCTCAAATCATATATGGCAAAAAGAGATAACACAACCATTGAAAAGCTAACTCCGGGACATTTAGCTATTGCCTCGTCATTGTCGAAAGTTATGGCCTCGGTAACGACTTACCCACATGAGGTAGTTCGTTCCAGGATGCAAGAGCAAGGCCAAGCCAGAAATGTTGCTCCTCAATACTCCGGCGTACTGGACTGTATCAAAAAGGTTTTTCAAAAGGAAGGTCTTCCCGGTTTTTACAGGGGTTGTGCGACAAATCTGTTACGAACAACTCCATCCGCCGTAATAACTTTCACCAGCTATGAGATGATACATAGGTTTCTACTGCAATTTATACCTCAAGGCGAGGAGAAACCTTCCCCCCATCTGAATTCGAATAGCAATAGCCATGTGAAGCCCCAAAAGGCGAACCGAGACGACTCGAAGGAAGAGAGTGATTCCGGCTTACAACAATCACAATCCCAACCAAGTAAGCAAACTAGAATTCCTCTGGGGAACAAAGAACAGTTAGCATCTAGACACTGA | 1338 | 47.53 | MERHGVGREEKHDQDDMSPRTRLTLTRHELAIGWRWSVVTFRYKRNDDACVGKRSLPALVNANRKEYEGEVVESKMSGGGSSTSRSTRDLICHAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPSGQRGGSIIVTSLQDIMRSEGFRGLYRGLSPTILALLPNWAVYFTVYEHLKGILHSDGDDGHQLSFGANMVAAAGAGGSTATATNPLWVVKTRLQTQGMRPGVVPYTGMVSAFTRIIQEEGIRGLYSGILPSLVGISHVAIQFPAYEKLKSYMAKRDNTTIEKLTPGHLAIASSLSKVMASVTTYPHEVVRSRMQEQGQARNVAPQYSGVLDCIKKVFQKEGLPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLQFIPQGEEKPSPHLNSNSNSHVKPQKANRDDSKEESDSGLQQSQSQPSKQTRIPLGNKEQLASRH | 445 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 5025679 | 5033570 | + | CmoCh15G009630.1 | Cmo15g00963 | 398471 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g00963 | 445 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 288 | 378 | IPR018108 | - | |
Cmo15g00963 | 445 | MobiDBLite | consensus disorder prediction | 389 | 445 | - | - | |
Cmo15g00963 | 445 | PRINTS | Mitochondrial carrier protein signature | 93 | 106 | IPR002067 | GO:0055085 | |
Cmo15g00963 | 445 | PRINTS | Mitochondrial carrier protein signature | 106 | 120 | IPR002067 | GO:0055085 | |
Cmo15g00963 | 445 | PRINTS | Mitochondrial carrier protein signature | 297 | 319 | IPR002067 | GO:0055085 | |
Cmo15g00963 | 445 | PRINTS | Mitochondrial carrier protein signature | 203 | 221 | IPR002067 | GO:0055085 | |
Cmo15g00963 | 445 | PRINTS | Mitochondrial carrier protein signature | 250 | 268 | IPR002067 | GO:0055085 | |
Cmo15g00963 | 445 | PRINTS | Mitochondrial carrier protein signature | 152 | 172 | IPR002067 | GO:0055085 | |
Cmo15g00963 | 445 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cmo15g00963 | 445 | Gene3D | Mitochondrial carrier domain | 65 | 183 | IPR023395 | - | |
Cmo15g00963 | 445 | Gene3D | Mitochondrial carrier domain | 184 | 383 | IPR023395 | - | |
Cmo15g00963 | 445 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 177 | IPR018108 | - | |
Cmo15g00963 | 445 | PANTHER | NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC | 83 | 388 | - | - | |
Cmo15g00963 | 445 | SUPERFAMILY | Mitochondrial carrier | 88 | 374 | IPR023395 | - | |
Cmo15g00963 | 445 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 188 | 276 | IPR018108 | - | |
Cmo15g00963 | 445 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 83 | 388 | IPR044712 | GO:0006862|GO:0055085 | |
Cmo15g00963 | 445 | MobiDBLite | consensus disorder prediction | 418 | 437 | - | - | |
Cmo15g00963 | 445 | Pfam | Mitochondrial carrier protein | 290 | 380 | IPR018108 | - | |
Cmo15g00963 | 445 | Pfam | Mitochondrial carrier protein | 93 | 179 | IPR018108 | - | |
Cmo15g00963 | 445 | Pfam | Mitochondrial carrier protein | 187 | 280 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo15g00963 | Cmo-Chr15:5025679 | Cmo17g01033 | Cmo-Chr17:8792819 | 5.28E-92 | dispersed | |
Cmo15g00963 | Cmo-Chr15:5025679 | Cmo08g00433 | Cmo-Chr8:2683606 | 7.04E-135 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g00963 | K15115 | - | csv:101216902 | 617.461 |