Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01052 ATGGCAATTAGCGCTTCGCTCGTTCGAGTTTCATCATTCAAGCTCTCTTCAGTCTCTCATGGTGATGATTTCTCACCTTCGTCGAAGTCGTCGTCCTTCATGGGCGTGCCACTTAATTTTCTTCCCTCTTTTCGCTCTGGGAAACAAAAGCAGTTTCATGACAATCTTGTCGTTGTATCGAAGAGGACGTCGGGTCTGGAGGAAGCCTTGAGAAATTTGAGAGAGCAAAAGCTTGAAACTGTGAGAAAAGTTAGAAGGATACCACCATTGAGGCGTGGGAAAGTATCTCCACGTCTCCCTGTGCCTGAACACATTCAAAAACCTCCTTATGTTGGTTCTTCTATACTGCCAGAAATTTCAAGTGAGTATCAAATGCATGATTCTGAAGGAATTGCTCAAATGAGGGCTGCATGTCAGCTTGCCGCTCGTGTGTTAGACTATGCTGGAACTCTAGTTAGGCCGTCAGTAACAACAAATGAAATTGACAAAGCAGTGCATCAGATGATTATTGATGCTGGTGCTTATCCATCACCTCTTGGCTACGGGGGATTTCCAAAGAGTGTTTGCACATCAGTTAATGAGTGCATGTGTCACGGAATACCAGACTCTCGTCAATTACAGAATGGTGATATAATAAACATTGATGTGACGGTCTACCTAAATGGATATCATGGAGACACATCGAAGACATATTTTTGTGGAGATGTAAGCGACGGAATGAGGCGTCTAGTGAAGGTTACAGAGGAATGTCTCGAGAGAGGTATTGCTGTATGCAAGGATGGTGCTAGTTTTAAGAAAATTGGGAAGAGAATCAGTGAGCATGCTGAAAAATATGGCTTTGGGGTGGTGGAGCGTTTTGTTGGACATGGTGTGGGATCTGTATTTCACTCTGAACCACTTATATATCACCACCGCAATGAGGAACCTGGACATATGGTCGAAGGTCAAACTTTTACAATTGAACCAATTCTTACGATGGGAGGCATTGACTGCATAACATGGCCAGACAACTGGACCACTTTAACAGTTGATGGTAGTCCAGCTGCTCAGTTTGAGCACACTATTTTGATAACTAGAAGGGGAGCTGAAATTTTGACCATCCCTTGA 1107 43.63 MAISASLVRVSSFKLSSVSHGDDFSPSSKSSSFMGVPLNFLPSFRSGKQKQFHDNLVVVSKRTSGLEEALRNLREQKLETVRKVRRIPPLRRGKVSPRLPVPEHIQKPPYVGSSILPEISSEYQMHDSEGIAQMRAACQLAARVLDYAGTLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSKTYFCGDVSDGMRRLVKVTEECLERGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGSVFHSEPLIYHHRNEEPGHMVEGQTFTIEPILTMGGIDCITWPDNWTTLTVDGSPAAQFEHTILITRRGAEILTIP 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6791948 6808460 + CmoCh15G010520.1 Cmo15g01052 398560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01052 368 Hamap Methionine aminopeptidase [map]. 123 368 IPR002467 GO:0006508|GO:0070006
Cmo15g01052 368 PRINTS Methionine aminopeptidase-1 signature 188 201 IPR001714 -
Cmo15g01052 368 PRINTS Methionine aminopeptidase-1 signature 210 226 IPR001714 -
Cmo15g01052 368 PRINTS Methionine aminopeptidase-1 signature 280 292 IPR001714 -
Cmo15g01052 368 PRINTS Methionine aminopeptidase-1 signature 310 322 IPR001714 -
Cmo15g01052 368 PANTHER METHIONINE AMINOPEPTIDASE 23 367 - -
Cmo15g01052 368 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 126 366 IPR002467 GO:0006508|GO:0070006
Cmo15g01052 368 CDD MetAP1 131 366 IPR002467 GO:0006508|GO:0070006
Cmo15g01052 368 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 286 304 IPR002467 GO:0006508|GO:0070006
Cmo15g01052 368 PANTHER METHIONINE AMINOPEPTIDASE 23 367 - -
Cmo15g01052 368 SUPERFAMILY Creatinase/aminopeptidase 85 367 IPR036005 -
Cmo15g01052 368 Pfam Metallopeptidase family M24 133 358 IPR000994 -
Cmo15g01052 368 Gene3D Creatinase/methionine aminopeptidase superfamily 88 367 IPR036005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo15g01052 Cmo18g01082 CCT
Cmo04g01626 Cmo15g01052 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01052 Cmo-Chr15:6791948 Cmo20g01188 Cmo-Chr20:11727409 3.88E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01052 K01265 - csv:101213374 671.389