Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01108 ATGAATTGGATTGTGTTCATAATTGTATCCATTTTCATTTCCTTTCTTGTAAAGTTGGTTCTTTTCCCTTTGAGGAGTGGCCCTTACAAGCTCCCACCAGGGCCAACCGCCTTCCCCATACTCACAAACTTCATATGGCTACGCCAGTCGCCTCTTGCAATTGAATCTGTGCTGCGCAGTTTCGTGGCCAAATATGGCCCCATCATCACCATCCATGTCGGACCGTCCCCGGCCATCATCATCGCCGATCGCTCCATCGTCCACAAAGCCCTCGTCCAAAATGGCGCCATCTTCGCCGACCGCCCTCGAGCTCTCTCCATCAATCGGATCACGGCCTCGGGCAACCTCGACAACATCACCTCCGCCCCTTATAGCCCTACTTGGCGTCTCCTCCGCCGTAATCTTGCAGGGGTAATGCTTCACCCTTCGCGGGTCAGGGCTTATTCCCGAGTCCGTAAAAGGGTGTTGGACATCCTCGTCACTCGTCTTGAAACTCGACAGGAATCGGACACCTTAGTTGTTCAACATTTTCAATTTGCTACGTTTTGTTTGTTGGCTTTGATGTGCTTTGGAGATGAGCTGAATGAGACACAAATCTTGGAAATTCATCAAGTTCAACGTGAGATTGTTGTCAATTTGCAACGCTTTCTTATACTCAATTTGTGGCCTAAATTGATGAAGATTTTGCTTCGTAAGCGTTGGAAGGAATATTTACAACTCAAGAACAAACAGCATGAGGTTCTCATCCCGGTAATCAAGGCACGAGAGAAGGTCAAACATGAAATAACAAAAGAAGGAGAAGAAAAAGAAGAGAATTTGGTATCATATGTTGATACATTGATTGATTTGCAGCTCATCGACCAAAAAAGAAAGCTTAATAATGAAGAAATAGTAAATTTATGCTCGGAGTTTCTAAATGCTGGGACCGACACGACAACGACGACATTGCAATGGATCATGGCGAATTTAGTGAAAAACCCACAAATCCAACAGAAACTTTTCGAAGAGATCGATGGAATTATGAAATCTAGTACGACACGACATGAATTACGAGAGGAAGAGGTAAAGGAAGAAGATTTAGGGAAGCTTCCATATTTGAAAGCTGTGATTCTAGAAGGGTTACGACGACACCCGCCGGGGCATTTCATCTTGCCCCATGCAGTGAAAGAAGACACGACGTTGGAGAACTACTTCATACCGAAAAACGGGACGGTGAATATCATGTCGGGAGATATGGGATGGGATCCGGAAGTATGGGAGGATCCGATGACGTTTAAGCCAGAGAGGTTCGTGAGCGGCGACGGAGAGGCGTTGTCGACGATGTTCGATATAACCGGGAGCAAGGAGATTAAAATGATGCCGTTCGGGGTCGGGAGGAGGATATGTCCGGGGTATGGTTTGGCAATGCTTCATTTGGAATATTTTGTAGCAAATTTGGTATGGAGATTTGAGTGGAAAGCTGTGGAAGGAGATGAAGTTGATTTATCAGAGAAGATGGAATTCACCATTTGGATGAAGAACCCTCTCAAAGCACAATTACGTCCAAGGTTTTAG 1554 45.56 MNWIVFIIVSIFISFLVKLVLFPLRSGPYKLPPGPTAFPILTNFIWLRQSPLAIESVLRSFVAKYGPIITIHVGPSPAIIIADRSIVHKALVQNGAIFADRPRALSINRITASGNLDNITSAPYSPTWRLLRRNLAGVMLHPSRVRAYSRVRKRVLDILVTRLETRQESDTLVVQHFQFATFCLLALMCFGDELNETQILEIHQVQREIVVNLQRFLILNLWPKLMKILLRKRWKEYLQLKNKQHEVLIPVIKAREKVKHEITKEGEEKEENLVSYVDTLIDLQLIDQKRKLNNEEIVNLCSEFLNAGTDTTTTTLQWIMANLVKNPQIQQKLFEEIDGIMKSSTTRHELREEEVKEEDLGKLPYLKAVILEGLRRHPPGHFILPHAVKEDTTLENYFIPKNGTVNIMSGDMGWDPEVWEDPMTFKPERFVSGDGEALSTMFDITGSKEIKMMPFGVGRRICPGYGLAMLHLEYFVANLVWRFEWKAVEGDEVDLSEKMEFTIWMKNPLKAQLRPRF 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7441035 7442681 + CmoCh15G011080.1 Cmo15g01108 398616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01108 517 Gene3D Cytochrome P450 26 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 Pfam Cytochrome P450 32 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 514 - -
Cmo15g01108 517 SUPERFAMILY Cytochrome P450 32 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01108 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Cmo15g01108 517 PANTHER CYTOCHROME P450 4 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01117 Cmo-Chr2:6793022 Cmo15g01108 Cmo-Chr15:7441035 0 dispersed
Cmo15g01108 Cmo-Chr15:7441035 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo15g01107 Cmo-Chr15:7436843 Cmo15g01108 Cmo-Chr15:7441035 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01108 K24184 - csv:101218555 766.533