Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01209 ATGTCATCCTCTTCCTCTTCTTCTTCTCCTACTTCTACTGCTACTGCTACCACTACCACTACCACTACCTTGTCTCAGCAGCAGCTGCTGGACCACCACCTTCCCGCCGCAGCTGAGCAGCTCTGTTATGTCCATTGCAACATTTGTGACACTGTCCTTGCGGTCAGTGTTCCTTGTTCTAGCTTGTTCAAAACTGTGACAGTGCGATGTGGACACTGCACTAATCTCCTGCCTGTCAACATGCGTGGCCTGCTCCTCCCTTCACCTAATCAATTTCATCACCTTGGCCACTCCCATAACATTCTGGAAAACATCCCCACTCCAAACCCCAATTATCTGATCAACCAGTTTGCAGCCACCAACAATTTTGTAACGCCATCTCGTGGAGTCATTGATGAGCTCCCCAGGCCCCCTGTCATCAACAGACCTCCAGAGAAGCGACAGAGAGTGCCATCTGCATACAATCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCAGTGAATCCCGATATATCCCATAGAGAAGCCTTCAGCGCCGCTGCTAAGAATTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCCGACCAGACAGTGAAGAAGACAAACATCCGCCAGCAGGAAGCAGAGCAGAGTGTTCTAATGAAAGACAATGGAGGATTCTATACCTCAGCAGCAGCCAACGTTGGTGTCTCCCATTTCTAG 711 49.93 MSSSSSSSSPTSTATATTTTTTTLSQQQLLDHHLPAAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHHLGHSHNILENIPTPNPNYLINQFAATNNFVTPSRGVIDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEAEQSVLMKDNGGFYTSAAANVGVSHF 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8382484 8384352 - CmoCh15G012090.1 Cmo15g01209 398717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01209 236 MobiDBLite consensus disorder prediction 1 20 - -
Cmo15g01209 236 Pfam YABBY protein 37 195 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00784 Cmo15g01209 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01308 Cmo-Chr5:10151693 Cmo15g01209 Cmo-Chr15:8382484 1.19E-53 dispersed
Cmo10g00578 Cmo-Chr10:2633020 Cmo15g01209 Cmo-Chr15:8382484 2.64E-49 dispersed
Cmo11g00535 Cmo-Chr11:2613770 Cmo15g01209 Cmo-Chr15:8382484 5.67E-54 dispersed
Cmo12g01231 Cmo-Chr12:10977446 Cmo15g01209 Cmo-Chr15:8382484 2.00E-49 dispersed
Cmo15g01209 Cmo-Chr15:8382484 Cmo02g01597 Cmo-Chr2:9202861 1.47E-134 wgd
Cmo15g01209 Cmo-Chr15:8382484 Cmo06g00784 Cmo-Chr6:4096291 1.45E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11207 PF04690 YABBY 5.50E-70 CL0114 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01209 K25796 - csv:101214748 379.407