Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01220 ATGGAAACCACCTCCGATTCTCTTCGAGCTCTCATAGATTCCCTCAATTTCTTGCTCCCATGGCCGTGGATTGACACCGCCGATTACCAATTCCGCTTCCTCTTCACCATCTTCTTCGCCGGTCTATTAATTTTCCTCTATACTAAAGGTACGCGTCGGCGCGTGCCACTGCCACCAGGTCCTCCGGGAGTTCCCCTGCTCGGAAACCTGCCGTTTCTCGACCCCCAACTTCACACCTACTTAAGAGAATTGGGCCGTAAATACGGGCCGATAGTAAAGATCCAACTCGGTAGAAAGGTGGGTATAGTCGTCAATTCACCCTCTGTGGCACGTGAGATTTTGAAAGATCACGATGTCACGTTCGCCAATCGTGACGTTCCTCAGGCTGGGAGACTCGCCTCGTACGGCAGTTCTGACATTGTTTGGACCCCGTACGGAGCAGAGTGGCGCATGTTGAGAAAAGTTTGCGTGCTGAAGATGCTCAGCAACGCCGCTTTGGAGTTCGAATACGACCTCCGTCGTAGAGAGGTCAGAAACACCGTCGCTAACCTCTACCGGCGAAGCGGGTCCGCGGTGAATGTGGGAGAGCAGAGTTTTTTGACGATTTTCAACGCGGCTACGAGCATGTTGTGGGGTGGGACAGTGGAGGGGGACCAGAGGGATAGCCTTGCAGCTGAGTTCAGAAAGACAGTTTCCGACATGACTGGGCTACAGGGAAGGCCTAATGTCTCTGACTTTTTTCCAAGCTTGGCTCGTTTCGATCTCCAGGGCATTGAAAAGCAGATGCACAAGCTTGCTCACAAATTCGATACCATTTTCGAGAATATGATCAATCAACGATTGAAAATTGCCGGTGGGGAAGACGGCGAGAGTGCCAAGAATAAAGATTTTTTGCAGGTCTTACTTGAGGTGAAAGATGGTGGCGACTCCAAAACTCCTTTCACCATCACCCACCTCAAAGCCTTGCTCATGGATATGGCGATTGGGGGGACAGACACATCGGCAAATACCATAGAGTTTGCGCTGGCAGAGCTGGTAAAGAACCCTGCAACTCTGAAGAAAGCACAGGAAGAAGTAGCGGCCGTGGTGGGAGAAGACAACATCGTGGAGGAGTCCCACATTCATAATTTGCCATATTTAAAAGCCGTAATGAAAGAAACTTTGCGTTTGCACCCAATGATACCGCTGCTAGTGCCACACTGCCCAAGTGAGACCACCATCATCTCCAAATACACAATCCCAAAGGGCTCTCGAGTGTTCATCAACGTGTGGGCCATTCAACGAGACCCCAACCACTGTGAAAATCCATTGGTGTTCGATCCGGAGAGGTTTGTGGACAATCAAAAGTGGGATTTCGGTGGGAGTGATTTACGTTACTTCCCATTTGGGTCCGGCAGAAGAAACTGTGTAGGGATAGCCATGGCTGAAAGAATGTTCATGTTCTTGCTTGCTACGCTCTTGCATTCCTTTGATTGGAAGGTGGAAGAGGGTGAGAAACTGGAAGTTGAGGAGAAATTTGGGATTGACGCCTCTTGTTCTCATCCCAACGCCAAGGCTATCTGA 1563 50.1 METTSDSLRALIDSLNFLLPWPWIDTADYQFRFLFTIFFAGLLIFLYTKGTRRRVPLPPGPPGVPLLGNLPFLDPQLHTYLRELGRKYGPIVKIQLGRKVGIVVNSPSVAREILKDHDVTFANRDVPQAGRLASYGSSDIVWTPYGAEWRMLRKVCVLKMLSNAALEFEYDLRRREVRNTVANLYRRSGSAVNVGEQSFLTIFNAATSMLWGGTVEGDQRDSLAAEFRKTVSDMTGLQGRPNVSDFFPSLARFDLQGIEKQMHKLAHKFDTIFENMINQRLKIAGGEDGESAKNKDFLQVLLEVKDGGDSKTPFTITHLKALLMDMAIGGTDTSANTIEFALAELVKNPATLKKAQEEVAAVVGEDNIVEESHIHNLPYLKAVMKETLRLHPMIPLLVPHCPSETTIISKYTIPKGSRVFINVWAIQRDPNHCENPLVFDPERFVDNQKWDFGGSDLRYFPFGSGRRNCVGIAMAERMFMFLLATLLHSFDWKVEEGEKLEVEEKFGIDASCSHPNAKAI 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8428018 8429655 + CmoCh15G012200.1 Cmo15g01220 398728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01220 520 PANTHER OS08G0547900 PROTEIN 34 508 - -
Cmo15g01220 520 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 34 508 - -
Cmo15g01220 520 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 SUPERFAMILY Cytochrome P450 58 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 Pfam Cytochrome P450 58 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Cmo15g01220 520 Gene3D Cytochrome P450 44 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01220 520 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01220 Cmo-Chr15:8428018 Cmo15g01222 Cmo-Chr15:8436240 6.02E-115 dispersed
Cmo15g01219 Cmo-Chr15:8424835 Cmo15g01220 Cmo-Chr15:8428018 0 tandem
Cmo15g01220 Cmo-Chr15:8428018 Cmo15g01221 Cmo-Chr15:8431889 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01220 - - bhj:120067210 741.88