Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01299 ATGGATGCGGCGGCGCTGGTGGCGGCGTTGGGCGGCGCGGTGGTGGCGTACTTTATTTGGTTCTTGAATATCCGACGGTCCTTGAGTGGGCCACGTGTTTGGCCGCTATTGGGCAGTCTTCCTGGGCTGATTAAGAATGGTCATCGAATGCATGACTGGATTGCAGAGAATCTCCGGTCGACTGGCGGCACGTACCAGACTTGCACGTGTGCCATTCCGTTTTTAGCTAAGAAGCAAGGTCTCGTGACGGTCACGTGCGACTCGAAGAATCTTAAGCATATTTTAAAAACCCGGTTCGAGAATTACCCGAAAGGGCCGAATTGGCAGGCTGTGTTTCATGATTTGCTTGGTGATGGAATCTTCAATTCAGATGGCGACACATGGTTGTTCCAGCGTAAAACTGCTGCACTGGAATTTACCACTAGGACTCTTCGCCAAGCCATGGCTCGTTGGGTTAGCCGAGCTATTAAGAATCGGTTTTGTCCGATTCTTGAGTCGGCTCAATGTCGTGCTAAGCCGGTTGATCTACAGGACATTTTGCTTCGGCTTACATTCGATAATATTTGTGGGTTGACTTTTGGTAAGGATCCACAGACTCTTGCGCTTGAATTGCCTGAAAACAGCTTTGCGCTAGCTTTCGATCGAGCCACTGAAGCCTCATTGTGTCGCTTTATTTTGCCTGGCTTTATCTGGAAGCTAAAAAAATGGCTCCGGCTCGGGATGGAGGTCACCTTAACCCAAAGCCTCGAGGACACGAATCAATACCTGAAAAATATCATCAAGACACGTAAGCTCGAGCTGTCCAGTCAGCACCATGTGGACAATAGTGGGACACCTCACGACGACTTGCTGTCAAGGTTTATGAAAAAGAAGGAATCCTACTCAGACGAATTCCTCCAACACGTGGTGCTTAACTTCATCCTAGCTGGACGAGACACGTCATCGGTCGCACTGAGCTGGTTCTTTTGGTTGGTCAGTCAAAACCCAAGAGTGGAGGAAAAAATCCTCATCGAAATATGCACCGTTCTGATGGAGACACGTGGCGAAGATATATCCACGTGGGTTGAAGAGCCGTTGGGATTTGAAGAAGTGGATAAATTGATTTACCTGAAAGCTGCCTTGTCGGAAACTCTTCGACTTTACCCATCGGTGCCGGAAGATTCAAAACATGTGATAAACGACGACGTTTTACCCACCGGAACTTTCGTCCCCGCCGGCTCCTCTGTTACGTATTCAATATACTCAATTGGTCGGATGAAATTCATATGGGGGGAAGATTGTTTAGAATTCAAACCAGAGAGATGGCTGTTGGGTTCAGATAAGGACAAAATTGAGCTTCAAAATACTTATAAATTCATTGCTTTTAATGCCGGACCAAGAATATGCTTGGGGAAAGATTTGGCTTACTTGCAAATGAAGTCGATTGCGGCCGCGGTGTTGCTCCGACACCGCCTGACGGTGGTTGCCGGCCACCGTGTGGAGCAGAAGATGTCGCTGACATTGTTCATGAAGTATGGACTTAAAGTTCAGTTGCAACCCAGAGATTTGGGGCATGTGGCGGAGAAGATTAGACAGACAACGGCGGAGACGGTGGCGACCGCGGAAAATATGGCTGTCTTGTGA 1623 48.37 MDAAALVAALGGAVVAYFIWFLNIRRSLSGPRVWPLLGSLPGLIKNGHRMHDWIAENLRSTGGTYQTCTCAIPFLAKKQGLVTVTCDSKNLKHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKNRFCPILESAQCRAKPVDLQDILLRLTFDNICGLTFGKDPQTLALELPENSFALAFDRATEASLCRFILPGFIWKLKKWLRLGMEVTLTQSLEDTNQYLKNIIKTRKLELSSQHHVDNSGTPHDDLLSRFMKKKESYSDEFLQHVVLNFILAGRDTSSVALSWFFWLVSQNPRVEEKILIEICTVLMETRGEDISTWVEEPLGFEEVDKLIYLKAALSETLRLYPSVPEDSKHVINDDVLPTGTFVPAGSSVTYSIYSIGRMKFIWGEDCLEFKPERWLLGSDKDKIELQNTYKFIAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVVAGHRVEQKMSLTLFMKYGLKVQLQPRDLGHVAEKIRQTTAETVATAENMAVL 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8915667 8917289 - CmoCh15G012990.1 Cmo15g01299 398807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01299 540 Pfam Cytochrome P450 29 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PANTHER CYTOCHROME P450 12 516 - -
Cmo15g01299 540 SUPERFAMILY Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 Gene3D Cytochrome P450 23 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01299 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Cmo15g01299 540 PANTHER CYTOCHROME P450 86A7 12 516 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00781 Cmo-Chr7:3536472 Cmo15g01299 Cmo-Chr15:8915667 4.80E-95 dispersed
Cmo13g00069 Cmo-Chr13:416652 Cmo15g01299 Cmo-Chr15:8915667 0 dispersed
Cmo15g01299 Cmo-Chr15:8915667 Cmo17g00955 Cmo-Chr17:8434822 5.14E-154 dispersed
Cmo15g01299 Cmo-Chr15:8915667 Cmo17g00415 Cmo-Chr17:2771360 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01299 K15398 - csv:101216733 917.146