Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01313 ATGGCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGATTAATTCAACGACCGGCGAAAGCTCCACCTCCGGCGAACCGTGTTCCATGGCGGTGCTTTGCAAAACAGAGCACGAGAAGATTGTCGACGGTGAAGAAGAAAAGTGGCGTGAGTGAAGTTGAAATAGTTAAGGATTTGAAGGTAATCGTGGAGGAGAAAATGGTGAGGAAGAAAGCGGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGGGATCACGTCCATGGCCGCCATCGCTGTCTATTACAGATTCTCCTGGCAACTCAAGGGCGGAGATTTTCCTGTTTTGGAAATGGTTGGTACTTTCGCACTATCGGTTGGAGCTGCGGTGGGGATGGAATTTTGGGCGAGATGGGCACATAAACAGCTGTGGCATGATTCGCTATGGAATATGCACAAGGTTATAGCGTTACATTTAAATGTGTTCTCTCATCATAGGGCGAGAAATGGACCGTTTGAATTGAACGATGTGTTCGCAATCATCAACGCGGTGCCTGCCATTGCTCTTCTTTCTTTCGGCTTCTTCCATCAGGGCTTCGTCCCCGGTCTATGTTTTGGTGCGGGTTTGGGAATTACAGTGTTTGGAATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCTGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATACATCATACGGACAAATTCGACGGCGTCCCGTACGGGTTGTTTTTAGGACCCAAGGAACTGGAAGACGTGGATGGCGAGGAAGAGCTGCAGAAAGAAATTAAAAAGAGAAGCAAAGTTTACAGAAATTAA 876 49.89 MATGISAVATAAPYRRLIQRPAKAPPPANRVPWRCFAKQSTRRLSTVKKKSGVSEVEIVKDLKVIVEEKMVRKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQLKGGDFPVLEMVGTFALSVGAAVGMEFWARWAHKQLWHDSLWNMHKVIALHLNVFSHHRARNGPFELNDVFAIINAVPAIALLSFGFFHQGFVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEDVDGEEELQKEIKKRSKVYRN 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9019551 9021806 - CmoCh15G013130.1 Cmo15g01313 398821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01313 291 Pfam Fatty acid hydroxylase 127 263 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cmo15g01313 291 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 10 287 IPR045019 GO:0016491
Cmo15g01313 291 PANTHER HYDROXYLASE, PUTATIVE, EXPRESSED-RELATED 10 287 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01313 Cmo-Chr15:9019551 Cmo16g00108 Cmo-Chr16:494904 5.28E-124 wgd
Cmo15g01313 Cmo-Chr15:9019551 Cmo18g01298 Cmo-Chr18:12476386 3.49E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01313 K15746 - csv:101214325 432.95