Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01314 ATGGCTACTAAAGAGTCCAGCTCTGCGGCTGCCACTGAGGGGAAGATCAAAGGGGTTCTTACCCATGGCGGCCGATATGTTCAGTATAATGTTTATGGTAACTTGTTTGAGGTTTCTGCTAAGTATGTTCCTCCTTTGCGACCCATTGGTAGAGGTGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCTGAGACACATGAAGAGGTTGCCATCAAGAAAATTGGAAATGCTTTTGATAACATAATTGATGCCAAGAGGACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACACGAAAATATTATAGCCATCAGAGACATCATTCGGCCACCAAAAAGAGAGGTTTTTAATGATGTTTATATCGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCCGACCAATCACTGACCGACGATCATTGCCAGTACTTTTTGTATCAGTTATTGCGTGGGCTGAAGTATGTACATTCAGCCAAGGTCCTGCACCGTGATCTCAAGCCAAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGCGATTTTGGATTAGCAAGAACGACTTCTGAAACCGACTTCATGACTGAATATGTGGTTACTCGTTGGTACCGAGCACCGGAATTGCTGCTCAATTGTTCGGAGTACACTGCTGCTATTGATGTTTGGTCTGTCGGATGCATTCTTGGTGAGATCATGACCAGAGAACCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTCAGACTTATAACTGAGCTACTAGGATCACCGGATGACGCCAGCCTAGGATTTCTCCGAAGCGATAATGCTCGAAGATACGTCAAGCAGCTTCCACAGTACAGGAAACAACAATTCTCAGCTAGATTTCCCAACATGTCTCCAGCTGCTCTTGATCTTCTAGAAAAGATGCTCGTATTCGATCCAAACAAACGCATTACAGTGGAGGAGGCACTTTGTCATCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCAGTCTGTGTCAGGCCCTTCAGTTTCGATTTCGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTCATCTGGAAAGAATCCGTCCGGTTCAACCCCGACGAATCAGGCAGAAGGACGACTCTTTGCGTCTAA 1152 44.18 MATKESSSAAATEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSARFPNMSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCVRPFSFDFEQPSCTEEHIKELIWKESVRFNPDESGRRTTLCV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9024086 9029073 - CmoCh15G013140.1 Cmo15g01314 398822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01314 383 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Cmo15g01314 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g01314 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Cmo15g01314 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 18 374 - -
Cmo15g01314 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
Cmo15g01314 383 SMART serkin_6 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g01314 383 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cmo15g01314 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 374 - -
Cmo15g01314 383 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Cmo15g01314 383 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g01314 383 CDD STKc_TEY_MAPK 36 372 - -
Cmo15g01314 383 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01463 Cmo15g01314 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00581 Cmo-Chr1:2943268 Cmo15g01314 Cmo-Chr15:9024086 1.37E-136 dispersed
Cmo05g00453 Cmo-Chr5:2102114 Cmo15g01314 Cmo-Chr15:9024086 0 dispersed
Cmo12g00069 Cmo-Chr12:367060 Cmo15g01314 Cmo-Chr15:9024086 0 dispersed
Cmo13g00170 Cmo-Chr13:1135229 Cmo15g01314 Cmo-Chr15:9024086 0 dispersed
Cmo15g01314 Cmo-Chr15:9024086 Cmo17g00427 Cmo-Chr17:2848649 0 wgd
Cmo15g01314 Cmo-Chr15:9024086 Cmo02g01463 Cmo-Chr2:8598641 0 wgd
Cmo15g01314 Cmo-Chr15:9024086 Cmo08g00862 Cmo-Chr8:5567966 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74929 PF00069 Pkinase 4.30E-71 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01314 - - csv:101214254 763.066