Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g01408 | ATGGAAGGGGTTGGAGGTGGGTCGGGATCGGAATTGTTTGGAGTTAAGCCGTCGTTGACTGTCGATGTTGTAAGTGATTCTCAGCCAGTGGAAGCTGCTTCTCCGATTAGTAGTCGACCTCCTGCATCGTCTTCGTTGAATTATGAGGAACTCATTCGCGGTGGAGGACAGATGGCGATTGATGACGACGCGCTTGTAGGAGAAGATGCTGGCGGCGGTAGCGGCAGCGGCGGCGGCGGCGGCTCGGCTGGGAATCGTTGGCCTCGTCAAGAAACTCTTGCGTTGCTTAAAATTAGATCGGATATGGATTCCGCTTTCCGTGATGCTACCCTCAAAGGTCCTCTCTGGGACGAAGTCTCCAGGAAGCTCGGGGAAATGGGTTATGCAAGAAATGCGAAGAAATGCAAGGAGAAATTTGAGAATGTACAGAAGTATTACAAGCGCACAAAGGAAGGGCGAGGAGGGCGTGGAGATGGGAAGACGTACAAATTCTTCACGCAGCTTGAGGCGCTACACAACGCCGCATCTCAAAACGTGGCATCATCGGGCTTCGGGATTAGCAACCCAACTCCAATCTCAGCCGTCAAAATCTCACAAACCCCAATGGGAATCTTTTCTCCGCCGCCCACCATCGCCGCTCCAATGGGTGTCAGCTTTTCATCCGACACCTCATCTTCATCAACAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGATGGGTTTTGACGTTGAAGGAGAGCCGTCGAGTGTGGCGGGAAGTAGCCGGAAGCGGCGGCGGAGAGGGGCGGTTAAGGGAAAAAGTGGTGGGCGGAGGAGAAGGCATAAGATGATGATGGGGTTTTTTGAGGGTTTGATGAAGGAAGTGGTGCAGAAACAGGAAGCTATGCAACAGAGATTCCTGGAAGCGATTGAGAGAAGAGAAGAGGAGAGAATGATGAGAGAAGAGACATGGAAGAGGCAAGAAATGGGGAGATTAAGGGAGGAGCAAGAAAAAATGGCTCAAGAACGGACAATTTCTGGGTCTAGAGATGCGGCCATAATTGCTTTTCTTCAGAAATTCACAGGCCAAACCATTGAATTACCGTCAGTGAATATCTCTCCTTCAGCCCCACAACAACACTATGATCTGTCAGTGCCAGTCCCTGCGCCCACGCCTGTCGCTATGCCACTATCCCCTGTCCCCCCACCTCCGCCATTGAAAACCCAGCCGCCTCCAAATGCAATGCCGTTTTTGGATCACCCAATATCAATATCAAATCAGGAAAGCAGCAGCCATGGCGGCCGGGGAGATGGCCCTTCAGAACCCATTTCTTCAAGATGGCCTAAACCCGAAGTTCTAGCGCTAATTAAGCTGCGAGGTGGGCTTGAATCAAGATATCAAGAAATGGGTCCTAAGGGCCCTCTTTGGGAAGAGATTTCAGCTGGAATGAACCGATTGGGTTACAAAAGAAGCGCCAAAAGATGCAAGGAAAAATGGGAGAATATCAACAAATACTTCAAGAAAGTTAAAGAAAGCAACAAAAAACGCCGCGAGGATTCCAAAACTTGCCCCTATTTCGATGAACTCGACGCTCTTTACCGGAAAAAGATCCCCACTGCCGGTGGTTCTGACGGTGGCGCCTCCTTTAGCGACACCGCCAAATTACAACAAACCCACATCCAAATGCCTCATACCACATCCGCTGAAGAACAACCACCACCACCGCCGCCGCCTCCGCCGTCGTCACCACCACCCACAAAGCCAGAAGACATTGTGAATGAGTTGATGGAGCTTCAGAACCTTTACGATGTCGATCACGTCGACGACGAGGACGATGACGATGACGACAACGACAACGACGACAACGACAACACCCGAGAAGAAAAGAGAAGGAACATGGATTACAAAATGGAGTTTCAGACAAGTGAGTTTCAATCAATGGCGGTGGTTCAATAA | 1950 | 50.77 | MEGVGGGSGSELFGVKPSLTVDVVSDSQPVEAASPISSRPPASSSLNYEELIRGGGQMAIDDDALVGEDAGGGSGSGGGGGSAGNRWPRQETLALLKIRSDMDSAFRDATLKGPLWDEVSRKLGEMGYARNAKKCKEKFENVQKYYKRTKEGRGGRGDGKTYKFFTQLEALHNAASQNVASSGFGISNPTPISAVKISQTPMGIFSPPPTIAAPMGVSFSSDTSSSSTEEEEEEEEEEEEEEEMGFDVEGEPSSVAGSSRKRRRRGAVKGKSGGRRRRHKMMMGFFEGLMKEVVQKQEAMQQRFLEAIERREEERMMREETWKRQEMGRLREEQEKMAQERTISGSRDAAIIAFLQKFTGQTIELPSVNISPSAPQQHYDLSVPVPAPTPVAMPLSPVPPPPPLKTQPPPNAMPFLDHPISISNQESSSHGGRGDGPSEPISSRWPKPEVLALIKLRGGLESRYQEMGPKGPLWEEISAGMNRLGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFDELDALYRKKIPTAGGSDGGASFSDTAKLQQTHIQMPHTTSAEEQPPPPPPPPPSSPPPTKPEDIVNELMELQNLYDVDHVDDEDDDDDDNDNDDNDNTREEKRRNMDYKMEFQTSEFQSMAVVQ | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9597606 | 9600581 | - | CmoCh15G014080.1 | Cmo15g01408 | 398916 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g01408 | 649 | ProSiteProfiles | Myb-like domain profile. | 443 | 501 | IPR001005 | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 602 | 620 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 394 | 415 | - | - | |
Cmo15g01408 | 649 | ProSiteProfiles | Myb-like domain profile. | 85 | 143 | IPR001005 | - | |
Cmo15g01408 | 649 | Gene3D | - | 87 | 148 | - | - | |
Cmo15g01408 | 649 | Gene3D | - | 445 | 506 | - | - | |
Cmo15g01408 | 649 | CDD | GT1 | 443 | 508 | - | - | |
Cmo15g01408 | 649 | CDD | GT1 | 85 | 150 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 543 | 565 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 621 | 635 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 418 | 432 | - | - | |
Cmo15g01408 | 649 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 71 | 624 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 566 | 585 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 535 | 649 | - | - | |
Cmo15g01408 | 649 | PANTHER | - | 71 | 624 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 206 | 280 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 64 | 87 | - | - | |
Cmo15g01408 | 649 | Pfam | Myb/SANT-like DNA-binding domain | 85 | 171 | IPR044822 | - | |
Cmo15g01408 | 649 | Pfam | Myb/SANT-like DNA-binding domain | 443 | 530 | IPR044822 | - | |
Cmo15g01408 | 649 | SMART | sant | 441 | 503 | IPR001005 | - | |
Cmo15g01408 | 649 | SMART | sant | 83 | 145 | IPR001005 | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 259 | 279 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 226 | 248 | - | - | |
Cmo15g01408 | 649 | MobiDBLite | consensus disorder prediction | 394 | 446 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00975 | Cmo15g01408 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo13g00415 | Cmo-Chr13:5187491 | Cmo15g01408 | Cmo-Chr15:9597606 | 2.92E-18 | dispersed | |
Cmo15g01408 | Cmo-Chr15:9597606 | Cmo20g01084 | Cmo-Chr20:10264768 | 6.55E-21 | dispersed | |
Cmo18g00936 | Cmo-Chr18:10531114 | Cmo15g01408 | Cmo-Chr15:9597606 | 3.04E-19 | dispersed | |
Cmo15g01408 | Cmo-Chr15:9597606 | Cmo02g00975 | Cmo-Chr2:6010106 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11227 | PF13837 | Myb_DNA-bind_4 | 7.70E-23 | CL0123 | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g01408 | - | - | cmos:111435698 | 1033.09 |