Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01408 ATGGAAGGGGTTGGAGGTGGGTCGGGATCGGAATTGTTTGGAGTTAAGCCGTCGTTGACTGTCGATGTTGTAAGTGATTCTCAGCCAGTGGAAGCTGCTTCTCCGATTAGTAGTCGACCTCCTGCATCGTCTTCGTTGAATTATGAGGAACTCATTCGCGGTGGAGGACAGATGGCGATTGATGACGACGCGCTTGTAGGAGAAGATGCTGGCGGCGGTAGCGGCAGCGGCGGCGGCGGCGGCTCGGCTGGGAATCGTTGGCCTCGTCAAGAAACTCTTGCGTTGCTTAAAATTAGATCGGATATGGATTCCGCTTTCCGTGATGCTACCCTCAAAGGTCCTCTCTGGGACGAAGTCTCCAGGAAGCTCGGGGAAATGGGTTATGCAAGAAATGCGAAGAAATGCAAGGAGAAATTTGAGAATGTACAGAAGTATTACAAGCGCACAAAGGAAGGGCGAGGAGGGCGTGGAGATGGGAAGACGTACAAATTCTTCACGCAGCTTGAGGCGCTACACAACGCCGCATCTCAAAACGTGGCATCATCGGGCTTCGGGATTAGCAACCCAACTCCAATCTCAGCCGTCAAAATCTCACAAACCCCAATGGGAATCTTTTCTCCGCCGCCCACCATCGCCGCTCCAATGGGTGTCAGCTTTTCATCCGACACCTCATCTTCATCAACAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGATGGGTTTTGACGTTGAAGGAGAGCCGTCGAGTGTGGCGGGAAGTAGCCGGAAGCGGCGGCGGAGAGGGGCGGTTAAGGGAAAAAGTGGTGGGCGGAGGAGAAGGCATAAGATGATGATGGGGTTTTTTGAGGGTTTGATGAAGGAAGTGGTGCAGAAACAGGAAGCTATGCAACAGAGATTCCTGGAAGCGATTGAGAGAAGAGAAGAGGAGAGAATGATGAGAGAAGAGACATGGAAGAGGCAAGAAATGGGGAGATTAAGGGAGGAGCAAGAAAAAATGGCTCAAGAACGGACAATTTCTGGGTCTAGAGATGCGGCCATAATTGCTTTTCTTCAGAAATTCACAGGCCAAACCATTGAATTACCGTCAGTGAATATCTCTCCTTCAGCCCCACAACAACACTATGATCTGTCAGTGCCAGTCCCTGCGCCCACGCCTGTCGCTATGCCACTATCCCCTGTCCCCCCACCTCCGCCATTGAAAACCCAGCCGCCTCCAAATGCAATGCCGTTTTTGGATCACCCAATATCAATATCAAATCAGGAAAGCAGCAGCCATGGCGGCCGGGGAGATGGCCCTTCAGAACCCATTTCTTCAAGATGGCCTAAACCCGAAGTTCTAGCGCTAATTAAGCTGCGAGGTGGGCTTGAATCAAGATATCAAGAAATGGGTCCTAAGGGCCCTCTTTGGGAAGAGATTTCAGCTGGAATGAACCGATTGGGTTACAAAAGAAGCGCCAAAAGATGCAAGGAAAAATGGGAGAATATCAACAAATACTTCAAGAAAGTTAAAGAAAGCAACAAAAAACGCCGCGAGGATTCCAAAACTTGCCCCTATTTCGATGAACTCGACGCTCTTTACCGGAAAAAGATCCCCACTGCCGGTGGTTCTGACGGTGGCGCCTCCTTTAGCGACACCGCCAAATTACAACAAACCCACATCCAAATGCCTCATACCACATCCGCTGAAGAACAACCACCACCACCGCCGCCGCCTCCGCCGTCGTCACCACCACCCACAAAGCCAGAAGACATTGTGAATGAGTTGATGGAGCTTCAGAACCTTTACGATGTCGATCACGTCGACGACGAGGACGATGACGATGACGACAACGACAACGACGACAACGACAACACCCGAGAAGAAAAGAGAAGGAACATGGATTACAAAATGGAGTTTCAGACAAGTGAGTTTCAATCAATGGCGGTGGTTCAATAA 1950 50.77 MEGVGGGSGSELFGVKPSLTVDVVSDSQPVEAASPISSRPPASSSLNYEELIRGGGQMAIDDDALVGEDAGGGSGSGGGGGSAGNRWPRQETLALLKIRSDMDSAFRDATLKGPLWDEVSRKLGEMGYARNAKKCKEKFENVQKYYKRTKEGRGGRGDGKTYKFFTQLEALHNAASQNVASSGFGISNPTPISAVKISQTPMGIFSPPPTIAAPMGVSFSSDTSSSSTEEEEEEEEEEEEEEEMGFDVEGEPSSVAGSSRKRRRRGAVKGKSGGRRRRHKMMMGFFEGLMKEVVQKQEAMQQRFLEAIERREEERMMREETWKRQEMGRLREEQEKMAQERTISGSRDAAIIAFLQKFTGQTIELPSVNISPSAPQQHYDLSVPVPAPTPVAMPLSPVPPPPPLKTQPPPNAMPFLDHPISISNQESSSHGGRGDGPSEPISSRWPKPEVLALIKLRGGLESRYQEMGPKGPLWEEISAGMNRLGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFDELDALYRKKIPTAGGSDGGASFSDTAKLQQTHIQMPHTTSAEEQPPPPPPPPPSSPPPTKPEDIVNELMELQNLYDVDHVDDEDDDDDDNDNDDNDNTREEKRRNMDYKMEFQTSEFQSMAVVQ 649
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 9597606 9600581 - CmoCh15G014080.1 Cmo15g01408 398916

Annotation


Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01408 649 ProSiteProfiles Myb-like domain profile. 443 501 IPR001005 -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 602 620 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 394 415 - -
Cmo15g01408 649 ProSiteProfiles Myb-like domain profile. 85 143 IPR001005 -
Cmo15g01408 649 Gene3D - 87 148 - -
Cmo15g01408 649 Gene3D - 445 506 - -
Cmo15g01408 649 CDD GT1 443 508 - -
Cmo15g01408 649 CDD GT1 85 150 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 543 565 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 621 635 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 418 432 - -
Cmo15g01408 649 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 71 624 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 566 585 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 535 649 - -
Cmo15g01408 649 PANTHER - 71 624 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 206 280 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 64 87 - -
Cmo15g01408 649 Pfam Myb/SANT-like DNA-binding domain 85 171 IPR044822 -
Cmo15g01408 649 Pfam Myb/SANT-like DNA-binding domain 443 530 IPR044822 -
Cmo15g01408 649 SMART sant 441 503 IPR001005 -
Cmo15g01408 649 SMART sant 83 145 IPR001005 -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 259 279 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 226 248 - -
Cmo15g01408 649 MobiDBLite consensus disorder prediction 394 446 - -
       

Pathway


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01408 - - - cmos:111435698 1033.09
       

WGDs- Genes


Select Gene_1 Gene_2 Event_name
Cmo02g00975 Cmo15g01408 CST
       

Dupl-types


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00415 Cmo-Chr13:5187491 Cmo15g01408 Cmo-Chr15:9597606 2.92E-18 dispersed
Cmo15g01408 Cmo-Chr15:9597606 Cmo20g01084 Cmo-Chr20:10264768 6.55E-21 dispersed
Cmo18g00936 Cmo-Chr18:10531114 Cmo15g01408 Cmo-Chr15:9597606 3.04E-19 dispersed
Cmo15g01408 Cmo-Chr15:9597606 Cmo02g00975 Cmo-Chr2:6010106 0 wgd
       

Deco-Alignment


Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g296 . . . . . . . . . . Cma02g00969 Cma15g01346 Car02g00715 Car15g01214 . . Cpe05g00748 . . . . . . . . . . . . . . Cone8ag0572 Cone12ag0575 . . . Csa05g00132 Chy09g01362 . . . . . . . . . . Cmo02g00975 Cmo15g01408 Cma06g00453 . . . . . Bhi12g00049 . . Lac11g1813 . . . Cla01g00116 Cam01g0118 Cec01g0118 Cco01g0119 Clacu01g0115 Cmu01g0116 Cre09g2389 Lsi09g00104 . . Cme09g01908
       

Syn-Families


Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo01g01932 . 61 291 Trihelix Transcription Factor Family AT1G12040 63.6 7.7e-44 176.4
Cmo12g01271 CCT 86 444 Trihelix Transcription Factor Family AT1G12040 64.3 2.3e-40 164.9
Cmo11g00596 . 46 220 Trihelix Transcription Factor Family AT1G12040 63.4 1.3e-38 159.1
Cmo10g00642 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 64.6 1.3e-38 159.1
Cmo11g00596 . 25 403 Trihelix Transcription Factor Family AT4G18670 82.0 1.2e-67 255.8
Cmo12g01271 CCT 66 444 Trihelix Transcription Factor Family AT4G18670 83.2 1.2e-67 255.8
Cmo10g00642 CCT 33 410 Trihelix Transcription Factor Family AT4G18670 82.2 1.3e-63 242.3
Cmo01g01932 . 21 218 Trihelix Transcription Factor Family AT4G18670 62.8 1.2e-40 166.0
Cmo08g00869 . 3 150 Trihelix Transcription Factor Family AT4G18670 55.8 1.0e-39 162.9
Cmo08g00870 . 26 150 Trihelix Transcription Factor Family AT4G18670 61.9 1.5e-38 159.1
Cmo17g00425 . 30 157 Trihelix Transcription Factor Family AT4G18670 59.4 5.2e-36 150.6
Cmo01g01932 . 2 218 Trihelix Transcription Factor Family AT3G19020 64.5 4.3e-52 204.1
Cmo17g00425 . 13 391 Trihelix Transcription Factor Family AT3G19020 62.6 2.6e-49 194.9
Cmo08g00870 . 7 384 Trihelix Transcription Factor Family AT3G19020 53.1 7.2e-47 186.8
Cmo08g00869 . 7 149 Trihelix Transcription Factor Family AT3G19020 62.3 4.6e-46 184.1
Cmo10g00642 CCT 32 228 Trihelix Transcription Factor Family AT3G19020 72.9 1.7e-43 175.6
Cmo11g00596 . 27 220 Trihelix Transcription Factor Family AT3G19020 70.9 2.6e-41 168.3
Cmo12g01271 CCT 68 429 Trihelix Transcription Factor Family AT3G19020 74.6 1.0e-40 166.4
Cmo11g00596 . 57 394 Trihelix Transcription Factor Family AT1G49490 75.1 4.0e-44 177.6
Cmo10g00642 CCT 65 401 Trihelix Transcription Factor Family AT1G49490 76.8 9.8e-43 172.9
Cmo17g00425 . 13 391 Trihelix Transcription Factor Family AT1G49490 60.1 4.8e-42 170.6
Cmo12g01271 CCT 97 429 Trihelix Transcription Factor Family AT1G49490 76.1 7.0e-41 166.8
Cmo01g01932 . 7 218 Trihelix Transcription Factor Family AT1G49490 59.2 2.9e-39 161.4
Cmo08g00870 . 53 384 Trihelix Transcription Factor Family AT1G49490 52.0 8.6e-39 159.8
Cmo08g00869 . 53 150 Trihelix Transcription Factor Family AT1G49490 70.4 4.2e-38 157.5
Cmo17g00425 . 30 391 Trihelix Transcription Factor Family AT2G15880 66.0 1.9e-55 214.9
Cmo08g00870 . 22 413 Trihelix Transcription Factor Family AT2G15880 52.7 8.3e-51 199.5
Cmo01g01932 . 15 220 Trihelix Transcription Factor Family AT2G15880 65.0 1.2e-49 195.7
Cmo11g00596 . 27 398 Trihelix Transcription Factor Family AT2G15880 67.5 1.9e-42 171.8
Cmo08g00869 . 22 219 Trihelix Transcription Factor Family AT2G15880 71.2 9.2e-42 169.5
Cmo10g00642 CCT 18 230 Trihelix Transcription Factor Family AT2G15880 65.1 3.9e-40 164.1
Cmo12g01271 CCT 68 444 Trihelix Transcription Factor Family AT2G15880 66.8 8.6e-40 162.9
Cmo06g01390 CST 34 359 Trihelix Transcription Factor Family AT2G15880 68.5 1.5e-36 152.1
Cmo17g00425 . 21 409 Trihelix Transcription Factor Family AT4G33970 62.3 1.5e-49 195.3
Cmo01g01932 . 5 220 Trihelix Transcription Factor Family AT4G33970 59.7 8.6e-45 179.5
Cmo08g00870 . 19 384 Trihelix Transcription Factor Family AT4G33970 51.9 1.4e-42 172.2
Cmo08g00869 . 7 144 Trihelix Transcription Factor Family AT4G33970 56.8 1.7e-37 155.2
Cmo12g00042 . 1 192 Trihelix Transcription Factor Family AT1G13450 62.8 3.6e-69 258.8
Cmo05g00075 . 1 222 Trihelix Transcription Factor Family AT1G13450 55.2 1.0e-63 240.7
Cmo06g00219 CCT,CST 53 296 Trihelix Transcription Factor Family AT5G01380 57.3 2.7e-49 193.4
Cmo14g00054 CCT,CST 47 293 Trihelix Transcription Factor Family AT5G01380 56.6 1.3e-48 191.0
Cmo02g00975 CST 101 597 Trihelix Transcription Factor Family AT1G33240 51.5 9.4e-93 338.6
Cmo09g01085 . 67 506 Trihelix Transcription Factor Family AT1G33240 51.7 1.5e-77 288.1
Cmo11g00596 . 25 403 Trihelix Transcription Factor Family AT4G18670 82.0 1.2e-67 255.8
Cmo12g01271 CCT 66 444 Trihelix Transcription Factor Family AT4G18670 83.2 1.2e-67 255.8
Cmo10g00642 CCT 33 410 Trihelix Transcription Factor Family AT4G18670 82.2 1.3e-63 242.3
Cmo01g01932 . 21 218 Trihelix Transcription Factor Family AT4G18670 62.8 1.2e-40 166.0
Cmo08g00869 . 3 150 Trihelix Transcription Factor Family AT4G18670 55.8 1.0e-39 162.9
Cmo08g00870 . 26 150 Trihelix Transcription Factor Family AT4G18670 61.9 1.5e-38 159.1
Cmo17g00425 . 30 157 Trihelix Transcription Factor Family AT4G18670 59.4 5.2e-36 150.6
Cmo17g00425 . 21 409 Trihelix Transcription Factor Family AT4G33970 62.3 1.5e-49 195.3
Cmo01g01932 . 5 220 Trihelix Transcription Factor Family AT4G33970 59.7 8.6e-45 179.5
Cmo08g00870 . 19 384 Trihelix Transcription Factor Family AT4G33970 51.9 1.4e-42 172.2
Cmo08g00869 . 7 144 Trihelix Transcription Factor Family AT4G33970 56.8 1.7e-37 155.2
Cmo09g01085 . 62 507 Trihelix Transcription Factor Family AT1G76880 63.6 1.8e-112 404.1
Cmo15g01408 CST 84 534 Trihelix Transcription Factor Family AT1G76880 52.0 8.3e-89 325.5
Cmo14g00274 CST 110 383 Trihelix Transcription Factor Family AT3G10000 53.1 6.1e-63 239.2
Cmo01g01932 . 2 218 Trihelix Transcription Factor Family AT3G19020 64.5 4.3e-52 204.1
Cmo17g00425 . 13 391 Trihelix Transcription Factor Family AT3G19020 62.6 2.6e-49 194.9
Cmo08g00870 . 7 384 Trihelix Transcription Factor Family AT3G19020 53.1 7.2e-47 186.8
Cmo08g00869 . 7 149 Trihelix Transcription Factor Family AT3G19020 62.3 4.6e-46 184.1
Cmo10g00642 CCT 32 228 Trihelix Transcription Factor Family AT3G19020 72.9 1.7e-43 175.6
Cmo11g00596 . 27 220 Trihelix Transcription Factor Family AT3G19020 70.9 2.6e-41 168.3
Cmo12g01271 CCT 68 429 Trihelix Transcription Factor Family AT3G19020 74.6 1.0e-40 166.4
Cmo11g00596 . 57 394 Trihelix Transcription Factor Family AT1G49490 75.1 4.0e-44 177.6
Cmo10g00642 CCT 65 401 Trihelix Transcription Factor Family AT1G49490 76.8 9.8e-43 172.9
Cmo17g00425 . 13 391 Trihelix Transcription Factor Family AT1G49490 60.1 4.8e-42 170.6
Cmo12g01271 CCT 97 429 Trihelix Transcription Factor Family AT1G49490 76.1 7.0e-41 166.8
Cmo01g01932 . 7 218 Trihelix Transcription Factor Family AT1G49490 59.2 2.9e-39 161.4
Cmo08g00870 . 53 384 Trihelix Transcription Factor Family AT1G49490 52.0 8.6e-39 159.8
Cmo08g00869 . 53 150 Trihelix Transcription Factor Family AT1G49490 70.4 4.2e-38 157.5
Cmo18g01082 CCT,CST 295 672 Trihelix Transcription Factor Family AT1G68690 65.2 1.3e-138 491.1
Cmo04g02967 CST 316 727 Trihelix Transcription Factor Family AT1G68690 62.3 1.1e-137 488.0
Cmo04g01626 CCT,CST 217 608 Trihelix Transcription Factor Family AT1G68690 64.0 2.0e-136 483.8
Cmo15g00209 CST 333 708 Trihelix Transcription Factor Family AT1G68690 65.0 7.6e-136 481.9
Cmo04g01815 . 335 742 Trihelix Transcription Factor Family AT1G68690 60.0 1.4e-124 444.5
Cmo18g00802 . 315 712 Trihelix Transcription Factor Family AT1G68690 55.8 6.3e-114 409.1
Cmo12g01280 CCT 277 565 Trihelix Transcription Factor Family AT1G68690 65.4 3.1e-113 406.8
Cmo11g00619 . 235 523 Trihelix Transcription Factor Family AT1G68690 65.1 1.3e-111 401.4
Cmo10g00657 CCT 311 599 Trihelix Transcription Factor Family AT1G68690 65.7 1.7e-111 401.0
Cmo04g00836 . 68 355 Trihelix Transcription Factor Family AT1G68690 61.6 7.7e-104 375.6
Cmo20g00866 CST 305 553 Trihelix Transcription Factor Family AT1G68690 65.9 3.5e-96 350.1
Cmo19g00148 CST 359 639 Trihelix Transcription Factor Family AT1G68690 56.7 6.1e-85 312.8
Cmo14g00961 CST 362 650 Trihelix Transcription Factor Family AT1G68690 55.1 6.8e-84 309.3
Cmo01g00292 CST 363 651 Trihelix Transcription Factor Family AT1G68690 55.5 8.9e-84 308.9
Cmo08g00740 . 734 1015 Trihelix Transcription Factor Family AT1G68690 54.4 8.6e-79 292.4
Cmo11g00708 CST 328 613 Trihelix Transcription Factor Family AT1G68690 53.6 8.6e-79 292.4
Cmo10g00745 CST 534 815 Trihelix Transcription Factor Family AT1G68690 54.0 1.1e-78 292.0
Cmo16g00903 . 69 362 Trihelix Transcription Factor Family AT1G68690 50.8 2.5e-78 290.8
Cmo17g00697 . 482 763 Trihelix Transcription Factor Family AT1G68690 54.0 4.3e-78 290.0
Cmo17g01367 . 73 357 Trihelix Transcription Factor Family AT1G68690 50.7 3.6e-77 287.0
Cmo08g00010 . 73 357 Trihelix Transcription Factor Family AT1G68690 50.3 8.0e-77 285.8
Cmo02g00410 CST 281 514 Trihelix Transcription Factor Family AT1G68690 51.0 1.0e-76 285.4
Cmo06g00339 . 38 342 Trihelix Transcription Factor Family AT1G68690 50.6 1.0e-76 285.4
Cmo01g02074 CCT,CST,ECH 45 326 Trihelix Transcription Factor Family AT1G68690 51.6 1.4e-76 285.0
Cmo14g01676 CST 101 385 Trihelix Transcription Factor Family AT1G68690 51.0 2.3e-76 284.3
Cmo06g01473 CST 40 324 Trihelix Transcription Factor Family AT1G68690 51.0 3.1e-76 283.9
Cmo04g01306 CST,ECH 65 349 Trihelix Transcription Factor Family AT1G68690 50.7 4.4e-75 280.0
Cmo04g02967 CST 309 673 Trihelix Transcription Factor Family AT1G26150 63.1 5.8e-120 429.1
Cmo18g01082 CCT,CST 263 617 Trihelix Transcription Factor Family AT1G26150 63.2 3.3e-115 413.3
Cmo04g01626 CCT,CST 216 553 Trihelix Transcription Factor Family AT1G26150 62.8 1.8e-113 407.5
Cmo15g00209 CST 331 654 Trihelix Transcription Factor Family AT1G26150 63.5 1.3e-111 401.4
Cmo04g01815 . 337 688 Trihelix Transcription Factor Family AT1G26150 55.9 8.6e-100 362.1
Cmo12g01280 CCT 277 511 Trihelix Transcription Factor Family AT1G26150 68.9 3.6e-98 356.7
Cmo11g00619 . 232 469 Trihelix Transcription Factor Family AT1G26150 68.3 2.0e-96 350.9
Cmo10g00657 CCT 312 545 Trihelix Transcription Factor Family AT1G26150 67.9 1.7e-95 347.8
Cmo04g00836 . 68 301 Trihelix Transcription Factor Family AT1G26150 66.0 1.0e-92 338.6
Cmo20g00866 CST 306 539 Trihelix Transcription Factor Family AT1G26150 66.7 3.3e-91 333.6
Cmo18g00802 . 363 658 Trihelix Transcription Factor Family AT1G26150 58.1 1.4e-89 328.2
Cmo10g00745 CST 527 764 Trihelix Transcription Factor Family AT1G26150 58.8 3.9e-76 283.5
Cmo14g00961 CST 334 599 Trihelix Transcription Factor Family AT1G26150 55.4 5.6e-75 279.6
Cmo01g00292 CST 364 600 Trihelix Transcription Factor Family AT1G26150 60.1 3.7e-74 276.9
Cmo14g01304 CST 379 614 Trihelix Transcription Factor Family AT1G26150 54.7 6.2e-74 276.2
Cmo11g00708 CST 325 562 Trihelix Transcription Factor Family AT1G26150 58.0 6.2e-74 276.2
Cmo06g00339 . 23 282 Trihelix Transcription Factor Family AT1G26150 53.8 1.8e-73 274.6
Cmo01g00071 CST 387 622 Trihelix Transcription Factor Family AT1G26150 54.2 6.9e-73 272.7
Cmo19g00148 CST 354 588 Trihelix Transcription Factor Family AT1G26150 57.4 2.6e-72 270.8
Cmo05g00173 . 170 399 Trihelix Transcription Factor Family AT1G26150 55.2 7.6e-72 269.2
Cmo19g00677 . 142 370 Trihelix Transcription Factor Family AT1G26150 55.0 2.2e-71 267.7
Cmo11g01125 . 142 370 Trihelix Transcription Factor Family AT1G26150 54.6 2.2e-71 267.7
Cmo08g00740 . 734 964 Trihelix Transcription Factor Family AT1G26150 58.4 6.5e-71 266.2
Cmo17g00697 . 482 712 Trihelix Transcription Factor Family AT1G26150 57.1 2.5e-70 264.2
Cmo17g01367 . 69 304 Trihelix Transcription Factor Family AT1G26150 55.1 3.2e-70 263.8
Cmo08g00010 . 49 304 Trihelix Transcription Factor Family AT1G26150 52.0 4.2e-70 263.5
Cmo06g01104 . 145 374 Trihelix Transcription Factor Family AT1G26150 52.2 4.6e-69 260.0
Cmo17g01232 . 81 315 Trihelix Transcription Factor Family AT1G26150 53.2 6.0e-69 259.6
Cmo20g00285 CCT,CST 175 404 Trihelix Transcription Factor Family AT1G26150 54.7 7.9e-69 259.2
Cmo11g02045 CCT 180 409 Trihelix Transcription Factor Family AT1G26150 55.6 7.9e-69 259.2
Cmo08g00072 . 25 280 Trihelix Transcription Factor Family AT1G26150 50.8 1.0e-68 258.8
Cmo04g00003 . 717 946 Trihelix Transcription Factor Family AT1G26150 53.0 1.0e-68 258.8
Cmo01g02074 CCT,CST,ECH 45 274 Trihelix Transcription Factor Family AT1G26150 55.2 1.3e-68 258.5
Cmo04g01306 CST,ECH 65 296 Trihelix Transcription Factor Family AT1G26150 56.0 1.3e-68 258.5
Cmo07g00711 . 174 403 Trihelix Transcription Factor Family AT1G26150 51.3 1.8e-68 258.1
Cmo19g01111 . 180 409 Trihelix Transcription Factor Family AT1G26150 54.7 5.1e-68 256.5
Cmo14g01676 CST 99 332 Trihelix Transcription Factor Family AT1G26150 55.1 5.1e-68 256.5
Cmo03g00987 CST 561 790 Trihelix Transcription Factor Family AT1G26150 50.9 8.7e-68 255.8
Cmo06g01473 CST 38 271 Trihelix Transcription Factor Family AT1G26150 55.1 8.7e-68 255.8
Cmo14g01393 CST 15 257 Trihelix Transcription Factor Family AT1G26150 51.4 1.5e-67 255.0
Cmo13g00174 . 79 322 Trihelix Transcription Factor Family AT1G26150 52.5 1.9e-67 254.6
Cmo17g00387 . 161 389 Trihelix Transcription Factor Family AT1G26150 54.3 2.5e-67 254.2
Cmo19g01124 . 598 853 Trihelix Transcription Factor Family AT1G26150 50.4 4.3e-67 253.4
Cmo04g00265 CST,ECH 61 288 Trihelix Transcription Factor Family AT1G26150 56.1 4.3e-67 253.4
Cmo11g01976 . 74 309 Trihelix Transcription Factor Family AT1G26150 51.7 4.3e-67 253.4
Cmo14g02120 . 146 375 Trihelix Transcription Factor Family AT1G26150 50.9 7.4e-67 252.7
Cmo02g00038 CCT,CST 173 393 Trihelix Transcription Factor Family AT1G26150 54.7 2.8e-66 250.8
Cmo04g01815 . 349 638 Trihelix Transcription Factor Family AT1G23540 60.9 2.3e-90 330.5
Cmo18g00802 . 292 608 Trihelix Transcription Factor Family AT1G23540 54.3 7.0e-79 292.4
Cmo11g00619 . 230 419 Trihelix Transcription Factor Family AT1G23540 71.6 3.2e-76 283.5
Cmo04g00836 . 11 252 Trihelix Transcription Factor Family AT1G23540 61.6 9.4e-76 282.0
Cmo10g00657 CCT 306 495 Trihelix Transcription Factor Family AT1G23540 71.1 4.7e-75 279.6
Cmo04g02967 CST 361 623 Trihelix Transcription Factor Family AT1G23540 52.5 6.1e-75 279.3
Cmo15g00209 CST 427 604 Trihelix Transcription Factor Family AT1G23540 72.5 4.4e-73 273.1
Cmo12g01280 CCT 277 461 Trihelix Transcription Factor Family AT1G23540 69.2 7.4e-73 272.3
Cmo04g01626 CCT,CST 317 503 Trihelix Transcription Factor Family AT1G23540 66.8 1.7e-69 261.2
Cmo18g01082 CCT,CST 382 568 Trihelix Transcription Factor Family AT1G23540 65.2 2.9e-69 260.4
Cmo20g00866 CST 302 489 Trihelix Transcription Factor Family AT1G23540 64.4 1.1e-68 258.5
Cmo14g01155 . 604 786 Trihelix Transcription Factor Family AT1G23540 54.6 5.9e-54 209.5
Cmo11g02045 CCT 167 359 Trihelix Transcription Factor Family AT1G23540 52.6 6.6e-53 206.1
Cmo19g01111 . 167 359 Trihelix Transcription Factor Family AT1G23540 52.1 2.5e-52 204.1
Cmo05g00173 . 159 349 Trihelix Transcription Factor Family AT1G23540 52.1 4.2e-52 203.4
Cmo02g00038 CCT,CST 160 352 Trihelix Transcription Factor Family AT1G23540 52.1 7.2e-52 202.6
Cmo20g00285 CCT,CST 162 354 Trihelix Transcription Factor Family AT1G23540 52.1 9.5e-52 202.2
Cmo06g00168 . 615 797 Trihelix Transcription Factor Family AT1G23540 52.5 9.5e-52 202.2
Cmo11g01125 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.3 1.2e-51 201.8
Cmo03g00987 CST 550 740 Trihelix Transcription Factor Family AT1G23540 51.6 2.8e-51 200.7
Cmo06g01104 . 134 324 Trihelix Transcription Factor Family AT1G23540 51.0 3.6e-51 200.3
Cmo14g00001 . 1145 1327 Trihelix Transcription Factor Family AT1G23540 53.6 3.6e-51 200.3
Cmo07g00711 . 163 353 Trihelix Transcription Factor Family AT1G23540 51.0 4.7e-51 199.9
Cmo19g00677 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.3 8.0e-51 199.1
Cmo04g02959 CST 352 528 Trihelix Transcription Factor Family AT1G23540 57.5 2.3e-50 197.6
Cmo17g00387 . 148 339 Trihelix Transcription Factor Family AT1G23540 51.5 4.0e-50 196.8
Cmo01g02074 CCT,CST,ECH 45 225 Trihelix Transcription Factor Family AT1G23540 53.6 1.5e-49 194.9
Cmo14g01304 CST 378 564 Trihelix Transcription Factor Family AT1G23540 50.3 2.0e-49 194.5
Cmo08g00740 . 733 914 Trihelix Transcription Factor Family AT1G23540 53.3 2.6e-49 194.1
Cmo17g00697 . 481 662 Trihelix Transcription Factor Family AT1G23540 51.6 2.6e-49 194.1
Cmo19g00148 CST 359 538 Trihelix Transcription Factor Family AT1G23540 53.3 2.6e-49 194.1
Cmo05g01068 . 130 323 Trihelix Transcription Factor Family AT1G23540 51.3 3.4e-49 193.7
Cmo11g00708 CST 311 512 Trihelix Transcription Factor Family AT1G23540 50.5 3.4e-49 193.7
Cmo10g00745 CST 521 714 Trihelix Transcription Factor Family AT1G23540 51.3 4.4e-49 193.4
Cmo04g00411 . 277 457 Trihelix Transcription Factor Family AT1G23540 54.7 2.2e-48 191.0
Cmo19g01124 . 624 801 Trihelix Transcription Factor Family AT1G23540 52.2 2.8e-48 190.7
Cmo16g00281 . 277 457 Trihelix Transcription Factor Family AT1G23540 55.2 2.8e-48 190.7
Cmo06g00914 . 436 613 Trihelix Transcription Factor Family AT1G23540 53.4 3.7e-48 190.3
Cmo14g00961 CST 362 549 Trihelix Transcription Factor Family AT1G23540 53.7 1.8e-47 188.0
Cmo01g00292 CST 363 550 Trihelix Transcription Factor Family AT1G23540 52.7 7.0e-47 186.0
Cmo18g01258 . 1014 1189 Trihelix Transcription Factor Family AT1G23540 51.1 9.2e-47 185.7
Cmo12g00042 . 1 377 Trihelix Transcription Factor Family AT3G25990 68.0 1.0e-145 513.8
Cmo05g00075 . 1 400 Trihelix Transcription Factor Family AT3G25990 63.6 9.3e-139 490.7
Cmo01g01932 . 61 291 Trihelix Transcription Factor Family AT1G12040 63.6 7.7e-44 176.4
Cmo12g01271 CCT 86 444 Trihelix Transcription Factor Family AT1G12040 64.3 2.3e-40 164.9
Cmo11g00596 . 46 220 Trihelix Transcription Factor Family AT1G12040 63.4 1.3e-38 159.1
Cmo10g00642 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 64.6 1.3e-38 159.1
Cmo06g00219 CCT,CST 50 299 Trihelix Transcription Factor Family AT2G38250 63.3 8.4e-55 211.5
Cmo14g00054 CCT,CST 1 296 Trihelix Transcription Factor Family AT2G38250 58.2 1.0e-52 204.5
Cmo04g02967 CST 355 806 Trihelix Transcription Factor Family AT5G38560 69.3 1.5e-171 600.5
Cmo15g00209 CST 335 756 Trihelix Transcription Factor Family AT5G38560 70.7 6.0e-168 588.6
Cmo18g01082 CCT,CST 289 727 Trihelix Transcription Factor Family AT5G38560 60.4 1.2e-149 527.7
Cmo04g01626 CCT,CST 211 666 Trihelix Transcription Factor Family AT5G38560 59.7 2.6e-147 520.0
Cmo04g01815 . 316 810 Trihelix Transcription Factor Family AT5G38560 53.1 1.1e-134 478.0
Cmo12g01280 CCT 281 620 Trihelix Transcription Factor Family AT5G38560 62.6 4.0e-124 443.0
Cmo18g00802 . 361 769 Trihelix Transcription Factor Family AT5G38560 56.1 1.0e-122 438.3
Cmo11g00619 . 219 589 Trihelix Transcription Factor Family AT5G38560 59.5 3.8e-122 436.4
Cmo10g00657 CCT 293 665 Trihelix Transcription Factor Family AT5G38560 58.1 4.2e-121 433.0
Cmo04g00836 . 72 403 Trihelix Transcription Factor Family AT5G38560 60.9 4.2e-113 406.4
Cmo20g00866 CST 312 613 Trihelix Transcription Factor Family AT5G38560 51.3 2.6e-91 334.0
Cmo02g00410 CST 288 579 Trihelix Transcription Factor Family AT5G38560 51.3 1.4e-84 311.6
Cmo14g00961 CST 366 667 Trihelix Transcription Factor Family AT5G38560 53.6 1.8e-84 311.2
Cmo14g01304 CST 385 669 Trihelix Transcription Factor Family AT5G38560 53.3 2.4e-84 310.8
Cmo01g00071 CST 393 677 Trihelix Transcription Factor Family AT5G38560 52.9 9.1e-84 308.9
Cmo01g00292 CST 367 670 Trihelix Transcription Factor Family AT5G38560 52.6 3.5e-83 307.0
Cmo19g00148 CST 359 653 Trihelix Transcription Factor Family AT5G38560 51.3 5.2e-79 293.1
Cmo08g00740 . 734 1030 Trihelix Transcription Factor Family AT5G38560 51.2 1.5e-78 291.6
Cmo10g00745 CST 534 819 Trihelix Transcription Factor Family AT5G38560 52.9 5.7e-78 289.7
Cmo11g00708 CST 332 617 Trihelix Transcription Factor Family AT5G38560 52.9 1.3e-77 288.5
Cmo11g02045 CCT 179 464 Trihelix Transcription Factor Family AT5G38560 50.9 1.0e-74 278.9
Cmo19g01111 . 179 464 Trihelix Transcription Factor Family AT5G38560 50.2 5.0e-74 276.6
Cmo05g00994 CCT,ECH 58 346 Trihelix Transcription Factor Family AT5G38560 50.2 1.1e-73 275.4
Cmo12g01280 CCT 284 645 Trihelix Transcription Factor Family AT4G32710 63.6 4.8e-123 439.5
Cmo11g00619 . 223 601 Trihelix Transcription Factor Family AT4G32710 60.7 1.9e-119 427.6
Cmo10g00657 CCT 318 675 Trihelix Transcription Factor Family AT4G32710 62.6 6.1e-118 422.5
Cmo04g00836 . 21 381 Trihelix Transcription Factor Family AT4G32710 56.0 4.4e-108 389.8
Cmo15g00209 CST 400 731 Trihelix Transcription Factor Family AT4G32710 57.6 1.6e-105 381.3
Cmo04g02967 CST 446 732 Trihelix Transcription Factor Family AT4G32710 65.2 1.7e-104 377.9
Cmo04g01815 . 400 808 Trihelix Transcription Factor Family AT4G32710 51.8 3.8e-104 376.7
Cmo04g01626 CCT,CST 323 636 Trihelix Transcription Factor Family AT4G32710 59.6 2.2e-99 360.9
Cmo18g01082 CCT,CST 389 681 Trihelix Transcription Factor Family AT4G32710 61.1 2.8e-99 360.5
Cmo20g00866 CST 312 630 Trihelix Transcription Factor Family AT4G32710 52.9 2.8e-91 334.0
Cmo19g00148 CST 359 644 Trihelix Transcription Factor Family AT4G32710 51.0 2.0e-76 284.6
Cmo06g01473 CST 40 326 Trihelix Transcription Factor Family AT4G32710 50.7 1.2e-70 265.4
Cmo04g01815 . 350 828 Trihelix Transcription Factor Family AT1G70460 64.4 3.3e-161 566.2
Cmo18g00802 . 292 788 Trihelix Transcription Factor Family AT1G70460 59.0 6.7e-146 515.4
Cmo04g02967 CST 322 773 Trihelix Transcription Factor Family AT1G70460 57.3 5.5e-140 495.7
Cmo15g00209 CST 349 754 Trihelix Transcription Factor Family AT1G70460 60.7 1.4e-135 481.1
Cmo12g01280 CCT 276 627 Trihelix Transcription Factor Family AT1G70460 65.1 7.4e-129 458.8
Cmo11g00619 . 229 572 Trihelix Transcription Factor Family AT1G70460 65.4 2.4e-127 453.8
Cmo10g00657 CCT 305 648 Trihelix Transcription Factor Family AT1G70460 66.3 3.1e-127 453.4
Cmo18g01082 CCT,CST 276 725 Trihelix Transcription Factor Family AT1G70460 52.6 1.3e-125 448.0
Cmo04g01626 CCT,CST 317 653 Trihelix Transcription Factor Family AT1G70460 66.3 1.7e-125 447.6
Cmo04g00836 . 65 403 Trihelix Transcription Factor Family AT1G70460 63.2 7.0e-119 425.6
Cmo20g00866 CST 302 581 Trihelix Transcription Factor Family AT1G70460 57.1 1.2e-97 355.1
Cmo02g00410 CST 278 563 Trihelix Transcription Factor Family AT1G70460 52.2 1.2e-86 318.5
Cmo14g01304 CST 378 672 Trihelix Transcription Factor Family AT1G70460 51.5 4.3e-84 310.1
Cmo01g00071 CST 386 680 Trihelix Transcription Factor Family AT1G70460 50.8 8.0e-83 305.8
Cmo14g00961 CST 362 654 Trihelix Transcription Factor Family AT1G70460 53.7 1.4e-79 295.0
Cmo20g00285 CCT,CST 164 461 Trihelix Transcription Factor Family AT1G70460 50.2 4.6e-78 290.0
Cmo01g00292 CST 363 655 Trihelix Transcription Factor Family AT1G70460 52.7 7.8e-78 289.3
Cmo11g00708 CST 332 617 Trihelix Transcription Factor Family AT1G70460 50.2 2.5e-76 284.3
Cmo10g00745 CST 529 819 Trihelix Transcription Factor Family AT1G70460 50.5 2.5e-76 284.3
Cmo08g00740 . 733 1019 Trihelix Transcription Factor Family AT1G70460 51.0 5.6e-76 283.1
Cmo19g00148 CST 359 643 Trihelix Transcription Factor Family AT1G70460 51.4 7.3e-76 282.7
Cmo01g02074 CCT,CST,ECH 45 331 Trihelix Transcription Factor Family AT1G70460 50.3 8.1e-75 279.3
Cmo17g00425 . 30 391 Trihelix Transcription Factor Family AT2G15880 66.0 1.9e-55 214.9
Cmo08g00870 . 22 413 Trihelix Transcription Factor Family AT2G15880 52.7 8.3e-51 199.5
Cmo01g01932 . 15 220 Trihelix Transcription Factor Family AT2G15880 65.0 1.2e-49 195.7
Cmo11g00596 . 27 398 Trihelix Transcription Factor Family AT2G15880 67.5 1.9e-42 171.8
Cmo08g00869 . 22 219 Trihelix Transcription Factor Family AT2G15880 71.2 9.2e-42 169.5
Cmo10g00642 CCT 18 230 Trihelix Transcription Factor Family AT2G15880 65.1 3.9e-40 164.1
Cmo12g01271 CCT 68 444 Trihelix Transcription Factor Family AT2G15880 66.8 8.6e-40 162.9
Cmo06g01390 CST 34 359 Trihelix Transcription Factor Family AT2G15880 68.5 1.5e-36 152.1
Cmo14g00274 CST 110 411 Trihelix Transcription Factor Family AT5G03680 56.5 5.3e-80 296.2
Cmo06g00452 CST 69 382 Trihelix Transcription Factor Family AT5G03680 53.2 1.1e-74 278.5
Cmo04g01491 . 118 215 Trihelix Transcription Factor Family AT5G03680 80.6 4.0e-43 173.7
       

Syn-Orthogroups


Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006703 0 4 0 0 0 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 5 2 1 38
       

Regulatory proteins


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11227 PF13837 Myb_DNA-bind_4 7.70E-23 CL0123 Cmo TF
       

Transcriptome


Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo15g01408 Cmo_Chr15 FPKM 2.100345 1.846901 2.254414 2.36455 3.511212 3.764242 3.176647 4.412891 4.743289 4.244611