Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01411 ATGGGAACTCCCACCAATGGCAGCAAAACCAGATGGATGATGGGTCTGCATTTAAAGGGTCGAAAGGAAAGCGACAATGAAGATCTTCATCTGTTCCGGGAGCTGCATAAGCGTGGCAAGGAACGCACTGCCTGCTTTCTTCTTCCCGTCCATGACCTTGAACACAGCAATGGTGGGAATTCTCAGTTCTACAGAATTCAACCAATCAGAAAAGAGTCTGAATTTGAACTCCTTTCTGAGGGCAACAAAAACGATTATGATTGGCTTAAAACACCACCTGCAACTCCTTTGTTCCCATCTTTGGAAATGGAAGCCATTGCTCCACATATGAAAGCTCAGAAAGAGACCAGATTTCTCCAGCTTCTCTCACAGCCACAGTCTCAGTCTCCATGTTGCAATTATGGCCAGGCTTCTAACAATTCAGAATCAACCAAGAGAAGCAATGGAATTGAGAAATCTCCCACTACAAATCCAAGAATACCATCCAGATCCATCACTCCCAGTTATAAACCACGCATCAATTCATCAACTGAACCCAAAAACACCCAAAGAATCACAAACCCAAACCAGAGAATCTCTCAGGCATCATCAACAGACCCCACAATCAAAAGAAACAACAATAAAACGAAATCCACAAATCTTAAAGAAAGCTACACAGATTATCTAACATCAAACCTCTCCAAGCCAAAGGCAAAGTCAAATCCAAACCCAAATCCAAGAAGTAGAACGACATCTCCAATTGTGAGATCGACAATAGCATCTCAAATTCCAGACTTCTCCAACGAAACACCTCCGAATCTGAGGACCGATCGGTCGAGCTCGGTGACGAGAGGGCGGCAGGTAGGAACTGAGCAGAAACCAGAGACGATCAACATCAACTCCAGAAGGCAATCGTGCTCGCCAAGTGTGACGAGGGGGCGCAAAGTGGAGGTGAAACAAGAGATTAACAGGGGCGGAAACTTGAGTAATGATCAGAGAAGAACTGAATCTACAAACATTATTGGAAAAAACGAAGCCATTGTCCACCAGAAGCCAATGTCGCAAATCGAGTGCTTACCCATCGATGCCCTAAAGAGGAGCCAACCTCGCCTTCCGACTCATGTCTCCCTCACTCGAAAGGTGGGAGCAGAATTTGTGGGCACATTCATCCTCATATTTGCTGCAACAGCCGCACCGATCATCAACCAAAAGTACAACAACATCACCTCTCTGATCGGAAACGCAGCATCCTCCGCCCTAGCGGTGATGATCGTAATTCTGTCGACGGGACACATCTCCGGCGCCCACCTTAACCCCTCACTCACCATCGCCTTAGCCGCCATCCGCCACTTCCCTTGGGTTCAAGTCCCTGCCTACCTCACCGCCCAAATCTCCGCCTCCATATGCGCCTCTTTCACTCTCAAAGGTATCTTTCACCCTTTCATGTCCGGCGGCGTTACAGTTCCCTCCGTCAGCACCGGCCAAGCCTTTGCTCTTGAATTCCTCATTGCCTTCAATCTCTTGTTCGTGGTCACTGCTGTCACTACTGATCCTCGCGTTGTTAGAGAGTTGGCCGGAATTGCCGTCGGAGCTACCGTGATGCTCAACATTCTTATCGCAGGGTCGTCCACCGGTGGTTCAATGAACCCCGTGCGGACTCTTGGCCCCGCCGTGGCCGCCGGAAATTACAGAGGGCTGTGGGTGTACATGGTGGCTCCTATACTTGGGGGGGTTGTCGGTGCCGGAACCTACTCTGCCATGAGAATCAAAGATGATGAAATGGATGTTCCACAGCACGTGAGGAGCTTCGGTCAGTACACGAGTGGCAGCTGTGTTCGTGTTTAA 1824 48.9 MGTPTNGSKTRWMMGLHLKGRKESDNEDLHLFRELHKRGKERTACFLLPVHDLEHSNGGNSQFYRIQPIRKESEFELLSEGNKNDYDWLKTPPATPLFPSLEMEAIAPHMKAQKETRFLQLLSQPQSQSPCCNYGQASNNSESTKRSNGIEKSPTTNPRIPSRSITPSYKPRINSSTEPKNTQRITNPNQRISQASSTDPTIKRNNNKTKSTNLKESYTDYLTSNLSKPKAKSNPNPNPRSRTTSPIVRSTIASQIPDFSNETPPNLRTDRSSSVTRGRQVGTEQKPETININSRRQSCSPSVTRGRKVEVKQEINRGGNLSNDQRRTESTNIIGKNEAIVHQKPMSQIECLPIDALKRSQPRLPTHVSLTRKVGAEFVGTFILIFAATAAPIINQKYNNITSLIGNAASSALAVMIVILSTGHISGAHLNPSLTIALAAIRHFPWVQVPAYLTAQISASICASFTLKGIFHPFMSGGVTVPSVSTGQAFALEFLIAFNLLFVVTAVTTDPRVVRELAGIAVGATVMLNILIAGSSTGGSMNPVRTLGPAVAAGNYRGLWVYMVAPILGGVVGAGTYSAMRIKDDEMDVPQHVRSFGQYTSGSCVRV 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9615452 9620479 - CmoCh15G014110.1 Cmo15g01411 398919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01411 607 Gene3D Glycerol uptake facilitator protein. 336 592 IPR023271 -
Cmo15g01411 607 PRINTS Major intrinsic protein family signature 372 391 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 PRINTS Major intrinsic protein family signature 560 580 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 PRINTS Major intrinsic protein family signature 492 510 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 PRINTS Major intrinsic protein family signature 523 545 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 PRINTS Major intrinsic protein family signature 411 435 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 PRINTS Major intrinsic protein family signature 448 467 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 PANTHER AQUAPORIN NIP2-1 342 596 IPR034294 -
Cmo15g01411 607 SUPERFAMILY Aquaporin-like 364 586 IPR023271 -
Cmo15g01411 607 ProSitePatterns MIP family signature. 429 437 IPR022357 -
Cmo15g01411 607 MobiDBLite consensus disorder prediction 124 287 - -
Cmo15g01411 607 CDD MIP 372 577 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 Pfam Major intrinsic protein 367 577 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo15g01411 607 PANTHER AQUAPORIN NIP5-1-RELATED 342 596 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00977 Cmo15g01411 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00187 Cmo-Chr1:811419 Cmo15g01411 Cmo-Chr15:9615452 7.77E-106 dispersed
Cmo03g00372 Cmo-Chr3:4659789 Cmo15g01411 Cmo-Chr15:9615452 4.74E-10 dispersed
Cmo04g00667 Cmo-Chr4:3315281 Cmo15g01411 Cmo-Chr15:9615452 4.50E-95 dispersed
Cmo07g01094 Cmo-Chr7:5729641 Cmo15g01411 Cmo-Chr15:9615452 2.57E-08 dispersed
Cmo14g00596 Cmo-Chr14:3016805 Cmo15g01411 Cmo-Chr15:9615452 5.48E-63 dispersed
Cmo15g01411 Cmo-Chr15:9615452 Cmo14g00597 Cmo-Chr14:3025643 1.70E-54 dispersed
Cmo15g01411 Cmo-Chr15:9615452 Cmo02g00977 Cmo-Chr2:6022903 1.19E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01411 K09874 - cpep:111783936 596.275