Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01429 ATGGAATGTGTTTTGCAGGCTGGAGGAAGAGGCTGGGAGGTTCAGCTGGGAAGAAGAGACAGTAGAGAAGCAAATAGATCTGGAGCTGTAAGCAACCTCCCCAGTCCTTTTGAACCTCTTGCAAATCTCACCGTCAAATTCGCCAACGTCGGTCTCAATTCCACCGACCTCGTTGCTTTATCGGGAGCGCACACGTTTGGGCGTTCAAGGTGCATATTCTTCAGCAGGCGATTAACCAACTTTAGCGGATCGGGACTTCCCGACCCGACTCTAGAGGCAGCCTACCGGGAGACCCTGATCGAGGCATGTCCTGCAGGCGGCGACAACAACCGGATCAACCTGGATCCGACGACTCCAGACGAATTCGACAAGAACTATTTCACGAATCTCCAAGCCAACCGGGGGCTTCTCACCAGCGACCAGGTGCTGTTCTCCACCGACGGCGCCGACACCATCGAGATTGTGAACCGGTTTGCGGCCAGCCAAGAAGCGTTCTTTGATGGGTTTGGAGCGTCCATGATCAAGATGGGGAATATTCGGCCGTTGACTGGAACTGATGGGGAGATTCGTTTGACTTGCACTCGGGTCAATCCTTTGCCGGCTGTGGCAGATATATATGATGCTCGTGTCCCCGAGTCGACCTAA 645 53.95 MECVLQAGGRGWEVQLGRRDSREANRSGAVSNLPSPFEPLANLTVKFANVGLNSTDLVALSGAHTFGRSRCIFFSRRLTNFSGSGLPDPTLEAAYRETLIEACPAGGDNNRINLDPTTPDEFDKNYFTNLQANRGLLTSDQVLFSTDGADTIEIVNRFAASQEAFFDGFGASMIKMGNIRPLTGTDGEIRLTCTRVNPLPAVADIYDARVPEST 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9709780 9711327 + CmoCh15G014290.1 Cmo15g01429 398937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01429 214 ProSitePatterns Peroxidases proximal heme-ligand signature. 56 66 IPR019793 -
Cmo15g01429 214 PRINTS Haem peroxidase superfamily signature 8 20 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PRINTS Haem peroxidase superfamily signature 56 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PRINTS Haem peroxidase superfamily signature 115 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PRINTS Plant peroxidase signature 129 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PRINTS Plant peroxidase signature 55 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PRINTS Plant peroxidase signature 113 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PRINTS Plant peroxidase signature 8 23 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PRINTS Plant peroxidase signature 171 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 Pfam Peroxidase 5 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 ProSiteProfiles Plant heme peroxidase family profile. 1 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PANTHER PEROXIDASE 58 3 197 - -
Cmo15g01429 214 Gene3D Peroxidase, domain 2 34 176 - -
Cmo15g01429 214 SUPERFAMILY Heme-dependent peroxidases 3 198 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 PANTHER PEROXIDASE 72-RELATED 3 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g01429 214 Gene3D - 4 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01429 Cmo-Chr15:9709780 Cmo02g01252 Cmo-Chr2:7503176 1.61E-88 dispersed
Cmo15g01429 Cmo-Chr15:9709780 Cmo20g00049 Cmo-Chr20:291502 8.58E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01429 K00430 - csv:101215530 330.102