Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g01429 | ATGGAATGTGTTTTGCAGGCTGGAGGAAGAGGCTGGGAGGTTCAGCTGGGAAGAAGAGACAGTAGAGAAGCAAATAGATCTGGAGCTGTAAGCAACCTCCCCAGTCCTTTTGAACCTCTTGCAAATCTCACCGTCAAATTCGCCAACGTCGGTCTCAATTCCACCGACCTCGTTGCTTTATCGGGAGCGCACACGTTTGGGCGTTCAAGGTGCATATTCTTCAGCAGGCGATTAACCAACTTTAGCGGATCGGGACTTCCCGACCCGACTCTAGAGGCAGCCTACCGGGAGACCCTGATCGAGGCATGTCCTGCAGGCGGCGACAACAACCGGATCAACCTGGATCCGACGACTCCAGACGAATTCGACAAGAACTATTTCACGAATCTCCAAGCCAACCGGGGGCTTCTCACCAGCGACCAGGTGCTGTTCTCCACCGACGGCGCCGACACCATCGAGATTGTGAACCGGTTTGCGGCCAGCCAAGAAGCGTTCTTTGATGGGTTTGGAGCGTCCATGATCAAGATGGGGAATATTCGGCCGTTGACTGGAACTGATGGGGAGATTCGTTTGACTTGCACTCGGGTCAATCCTTTGCCGGCTGTGGCAGATATATATGATGCTCGTGTCCCCGAGTCGACCTAA | 645 | 53.95 | MECVLQAGGRGWEVQLGRRDSREANRSGAVSNLPSPFEPLANLTVKFANVGLNSTDLVALSGAHTFGRSRCIFFSRRLTNFSGSGLPDPTLEAAYRETLIEACPAGGDNNRINLDPTTPDEFDKNYFTNLQANRGLLTSDQVLFSTDGADTIEIVNRFAASQEAFFDGFGASMIKMGNIRPLTGTDGEIRLTCTRVNPLPAVADIYDARVPEST | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9709780 | 9711327 | + | CmoCh15G014290.1 | Cmo15g01429 | 398937 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g01429 | 214 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 56 | 66 | IPR019793 | - | |
Cmo15g01429 | 214 | PRINTS | Haem peroxidase superfamily signature | 8 | 20 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PRINTS | Haem peroxidase superfamily signature | 56 | 71 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PRINTS | Haem peroxidase superfamily signature | 115 | 130 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PRINTS | Plant peroxidase signature | 129 | 146 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PRINTS | Plant peroxidase signature | 55 | 67 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PRINTS | Plant peroxidase signature | 113 | 128 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PRINTS | Plant peroxidase signature | 8 | 23 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PRINTS | Plant peroxidase signature | 171 | 184 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | Pfam | Peroxidase | 5 | 161 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 197 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PANTHER | PEROXIDASE 58 | 3 | 197 | - | - | |
Cmo15g01429 | 214 | Gene3D | Peroxidase, domain 2 | 34 | 176 | - | - | |
Cmo15g01429 | 214 | SUPERFAMILY | Heme-dependent peroxidases | 3 | 198 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | PANTHER | PEROXIDASE 72-RELATED | 3 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo15g01429 | 214 | Gene3D | - | 4 | 197 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo15g01429 | Cmo-Chr15:9709780 | Cmo02g01252 | Cmo-Chr2:7503176 | 1.61E-88 | dispersed | |
Cmo15g01429 | Cmo-Chr15:9709780 | Cmo20g00049 | Cmo-Chr20:291502 | 8.58E-74 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g01429 | K00430 | - | csv:101215530 | 330.102 |