Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g01435 | ATGGCCCCTACTTCCCTGGCTTATCGCTTCCGACAATCCGTTGCCCCGACCGCCCTCCGATCCTATGCTGCCGAGTTCATCTCCACCTTCTTCTACGTCTTCTTCGTTGTTGGAGCATCAATCGCCTCCCGGAAGTTTGTGCCCGGGGCTGCTGCAACCGACCCATCGAGCCTTTTGGTGGTGGCTATAGCCAATGCCTTTGCTTTGGCCTCAGCCATTTACATTGCTGCCAACGTCTCTGGCGGACATGTCAACCCGGCGGTGACGTTCGGGATGGCAGTCGGCGGCCATATCAGTGTTCCTACCGCTCTCTTCTATTGGTTTGCTCAAATGCTTGCCTCTATCATGGCTTGCATTGTTCTTAGAGTCACCATTGTTGGACAGCGCGTTCCAAGCTATGTCATTGCCGAGGAGATGACGGGCTTCGGAGCATCGGTGGTAGAAGGTGTATTGACGTTTGCTCTAGTGTACACTGTTTTTGTCGCTAGTGACCCGAGAAGAGGTCCATGCAATGCGATCGGCGCTGTGATGGTCGGGCTGATGGGCGGAGCCAACGTGCTGGCTGCCGGGCCATTTTCCGGTGGATCGGTGAACCCAGCGTGTGCGTTCGGGTCGGCAATTGTGGCTGGGAGTTTCAAGAACCAGGCAGTGTACTGGGTTGGGCCGTTGATCGGAGCAGCTCTGGCCGGGATTGTTCACGATAATGTGATTTTTCCGACCGAAAATGTAGATTCATTCACAGGGGTTCCTGAGGTTGTTGCTGTCTCACTCCGGTCTACGTATCCAGAGCTGAAAACCACACCTTCATCTCCGGTGAAGCTAATCTCACAGTTTACACCAATGGCGGTGGCTCCCTTCTCCACCAGTTTATTCCCGCCATTTCCTTCTATCTTCAAAACCTCATTATTCACCATTAAATCCTTCAAAACTCGTTCAACTTCCTCCCTCATACTCTCCCAATTTTCACTCGAAACCCACCACAAAAAACCTCCAACCGCCGACCCACCGGAATTTGACGGCACTGGCGCCGCCGCGCCCACCCGAGGCGACCGATTCCTCGAACACCATCATTCCGTCGAAGCTGTCAATTTCGTGCTCAAAGAGAACAAGAAGAATCGGAAAAAAAAGAAGGATAAGGCGTTGAAGGTTTCTTTGGCGGTTGCTTCTTGTTATGGCTGTGGTGCTCCGTTGCAGACCTTGGAATCGGATGCTCCGGGTTATGTAGAACCGGAAACCTACGAATTAAAAAAGAAGCATCACCAACTTAGAAGAGTTATATGTGGGAGGTGCCGCCTCTTATCTCATGGTCACATGATAACTGCTGTGGGTGGAAATGGAGGTTATTCAGGAGGAAAGCAATTCATCACGGCCGAGGAGCTTCGAGTAAAGCTGTCTCACTTACGTTACGAGAAGGCTTTGATTGTGAAATTGGTTGATATAGTTGACTTTAATGGAAGTTTTTTGGCACGTGTGCGTGATCTTGCTGGTGCGAATCCAATAATACTGGTGGTCACTAAGGTCGATCTCCTTCCCAAGGGGACTGATCTGAACTGTATTGGTGATTGGGTTGTGGAGGCCACTGTCAAAAAGAAGCTTAGTGTTCTGAGTGTCCATCTGACGAGCTCGAAGTCTTTGGTTGGAGTAGCTGGAGTAGTAGCGGATATTCAAAAGGAGAAAAAGGGGCGGGATGTCTACATTCTGGGCTCAGCTAATGTTGGGAAGTCTGCTTTCATCAACGCTTTGTTGAAAAAGATGGCTGAAAGGGATCCGGTTGCCGCAGCAGCTCAAAAATACAGACCCATACAATCTGCTGTTCCTGGAACTACTTTAGGTCCAATACAAATTGATGCTTTCTTAGGAGGAGGGAAAATATTTGACACACCTGGAGTCCATCTCCACCATAGGCTAGCTGCGGTCGTTCATTCCGAAGATCTTCCTGCCCTGGCTCCTCAAAGTCGTCTGAGGGGTCAAAATTTCCAAGTTGATCAATTAGCAACTGACAATGAAATGGGAAGCAAGGACTTATCCAGTGGGTTGAATGGATTTTCTATATTTTGGGGAGGTCTTGCGAGAGTAGATTTACTAAAGGTTCAACCAGAAACATGTTTGACATTTTATGGTCCAAAAGGATTGCAGATCCACGTGGTGCCCACTGAAAAAGCAGATGAATTTTATGAGAAAGAACTAGGAATTTCACTAACACCTCCATCTGGAAAACAAGCAAGGGATGACTGGAGAGGGCTCGAAGTAATGCGTCAATTGAAGATAAATTTTGAGGACGAGCAAAGGCCTGCTTGTGATGTGGCTATATCAGGCTTGGGATGGATCACTTTTGAACGAAAGAAGTCGCTCCAAAATAATCACTCAGATTTAGAATCATCCGTCGATGAACTCAAGTTGGCTGTACATGTCCCCAAGCCAGTGGAGATTTTCGTTCGACCTCCCATGCCCGTTGGTAAAGCTGGATCGGAATGGTATCAGTACCGCGATTTGACAGAAGAGGAAGAGGAAACAAGACCAAGATGGTTTTTTTAG | 2535 | 48.64 | MAPTSLAYRFRQSVAPTALRSYAAEFISTFFYVFFVVGASIASRKFVPGAAATDPSSLLVVAIANAFALASAIYIAANVSGGHVNPAVTFGMAVGGHISVPTALFYWFAQMLASIMACIVLRVTIVGQRVPSYVIAEEMTGFGASVVEGVLTFALVYTVFVASDPRRGPCNAIGAVMVGLMGGANVLAAGPFSGGSVNPACAFGSAIVAGSFKNQAVYWVGPLIGAALAGIVHDNVIFPTENVDSFTGVPEVVAVSLRSTYPELKTTPSSPVKLISQFTPMAVAPFSTSLFPPFPSIFKTSLFTIKSFKTRSTSSLILSQFSLETHHKKPPTADPPEFDGTGAAAPTRGDRFLEHHHSVEAVNFVLKENKKNRKKKKDKALKVSLAVASCYGCGAPLQTLESDAPGYVEPETYELKKKHHQLRRVICGRCRLLSHGHMITAVGGNGGYSGGKQFITAEELRVKLSHLRYEKALIVKLVDIVDFNGSFLARVRDLAGANPIILVVTKVDLLPKGTDLNCIGDWVVEATVKKKLSVLSVHLTSSKSLVGVAGVVADIQKEKKGRDVYILGSANVGKSAFINALLKKMAERDPVAAAAQKYRPIQSAVPGTTLGPIQIDAFLGGGKIFDTPGVHLHHRLAAVVHSEDLPALAPQSRLRGQNFQVDQLATDNEMGSKDLSSGLNGFSIFWGGLARVDLLKVQPETCLTFYGPKGLQIHVVPTEKADEFYEKELGISLTPPSGKQARDDWRGLEVMRQLKINFEDEQRPACDVAISGLGWITFERKKSLQNNHSDLESSVDELKLAVHVPKPVEIFVRPPMPVGKAGSEWYQYRDLTEEEEETRPRWFF | 844 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9743965 | 9752908 | + | CmoCh15G014350.1 | Cmo15g01435 | 398943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g01435 | 844 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 473 | 634 | IPR027417 | - | |
Cmo15g01435 | 844 | Coils | Coil | 781 | 801 | - | - | |
Cmo15g01435 | 844 | Pfam | 50S ribosome-binding GTPase | 564 | 631 | IPR006073 | GO:0005525 | |
Cmo15g01435 | 844 | Gene3D | Glycerol uptake facilitator protein. | 6 | 247 | IPR023271 | - | |
Cmo15g01435 | 844 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - | |
Cmo15g01435 | 844 | Gene3D | - | 458 | 634 | IPR027417 | - | |
Cmo15g01435 | 844 | Pfam | Major intrinsic protein | 16 | 233 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo15g01435 | 844 | MobiDBLite | consensus disorder prediction | 326 | 347 | - | - | |
Cmo15g01435 | 844 | SUPERFAMILY | Aquaporin-like | 13 | 242 | IPR023271 | - | |
Cmo15g01435 | 844 | CDD | YqeH | 427 | 630 | - | - | |
Cmo15g01435 | 844 | PRINTS | Major intrinsic protein family signature | 147 | 165 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo15g01435 | 844 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo15g01435 | 844 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo15g01435 | 844 | PRINTS | Major intrinsic protein family signature | 20 | 39 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo15g01435 | 844 | PRINTS | Major intrinsic protein family signature | 216 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo15g01435 | 844 | PRINTS | Major intrinsic protein family signature | 179 | 201 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo15g01435 | 844 | PANTHER | NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL | 310 | 844 | IPR044229 | GO:0003924 | |
Cmo15g01435 | 844 | ProSiteProfiles | Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. | 457 | 633 | IPR030378 | GO:0005525 | |
Cmo15g01435 | 844 | CDD | MIP | 20 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo15g01435 | Cmo-Chr15:9743965 | Cmo18g00087 | Cmo-Chr18:583155 | 1.73E-49 | dispersed | |
Cmo20g00048 | Cmo-Chr20:285600 | Cmo15g01435 | Cmo-Chr15:9743965 | 3.68E-23 | dispersed | |
Cmo15g01435 | Cmo-Chr15:9743965 | Cmo03g01198 | Cmo-Chr3:9354988 | 5.05E-55 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g01435 | K13427 | - | csv:101215455 | 978.778 |