Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01451 ATGTCCCAACGACCTCCCTCCGATCATGGTTCATCCTCCTCTGTCGCCAAGCTCCGCAAGATCCCCGCCATTCCTCTTCTCCGCGGTTCCATATCCAATGCCGGAGACTCCGATTCCGATGAAGAATACGGCCTTGACGAGGATTTTCCTTATGAACCTGACGATTCCTCCATCATTATGGCCTCCTCTCTCGGGTTGAACCACATTCGGACGCGGTCTGGTCCTTTGCCGCAACGGACCTTGGCCGCTGGCACGCCCTCCAATTTGGGAGAAACTTCCAGGACTAATGCCACCGCTGGGACCGATCCCGAGCCAAAACATTCCTCCACTGATCATGGGAAAAAAGTTCTGTGGAGTCAATCGAAATCGTTTAGATATCCAACAGCTCTGAATCATGATTTTGAGGTTAATCATGTAGCGTTTGGAAAGGAAATTCAGTCTCCACGATTCCGTGCCATACTGCGTGTTACTAGTGGAAAAAAGAAGAGAACTCTGGATATCAAAAGCTTCTCTCACGAGCTTAATTCCAAGGGAGTTCGCCCTTTTCCAGTTTGGAAGCCTCGGGCCTTTGGATATCTGGAAGAGATCATGGTGGCTATCAGAGCCAAATTTGACAGATTGAAGGATGATGTTAATTACGAACTGGGTATTTTTGCTGGAGATCTGGTGGATACACTTGAAAAGACAGACCGGTCTCTGCCTGAAATAAGAGAAGGTTTGGAGGACCTATTGGTGGTTGCTCGGAAATGTGCAACAATGTCACCTACTGATTTTTGGGCGAAAGGTGAAGGGATTGTCCAAAATCTAGACGACCGGCGGCAGGAGCTGCCATTAGGGGTTCTTAAGCAAGCCCATACCCGCCTTCTTTTCATCTTGACACGATGTACTAGGCTTATTCAGTTTAGAAAGGAAAGTGGTTATGAAAATGAGCACATTTTGGGTCTTCATCAACTTAATGATCCAGGAATTTATCCAGAGAAAATTAGGAAGCTCGAACAACTCGACTTTGGCGATCCATTGACTACGAAAGAAGATATTGAGCAGCAGCTGAAGTTGGTTGGGAAGGATCAAGCCAGTCGCATGGTGAAGCACCATTCAGGTCCAAGTTTTGGTAGTAGTGCTGGAAATGTTGATCTGGACTCTGCCATAAGTAATGATTCATCTACAAGCACATATAGGATGTCATCCTGGAAAAAGCTACCATCAGCAGTTGCTAAGAACCGGAAAGACACTGACACTACTGAAACACCTTCTAAGGATAAACTTGAAACGTTGCATGTACATGAAGCTAAGACTGGGAGCATCAATCAATTAGATACCCCATCTATTCCTATTGCGCATTCTGAAGCACCTCCTAAAGAACAAAAACTATCTTGGGGAATATGGGGTTATCAAAATGCTACTTTTGAGAATCTGATGATATGTCGGATTTGTGAGGTTGAAATTCCTACCATTCATGTTGAGGAGCATTCTCGAATATGTACGATTGCCGATAGGTGTGATTTGAAAGGTTTAACTGTGAACGAGCGCCTTGCACGGGTTGCTACAGCTCTTGATAAAATACTAGAGTCTTGGACACCTAAAAGTACACCGAGAAGTAGCAATGTTTCCTGTGGAAATTTCGATACTGTTAAGGTTTCTACATCAAGTATGCAAGAAGATTTTTTTGAGTTATCATCTAAAGGAATCAATTTGTCTTGTCAAAACTCAGAAGATTTGCTTGATTCCCTCCCTGTTACTGGCAACTCTTTTTGTATGGAAAGTCAGGATACCTTTCCTGATCCATCATACAATCGACCATTTAATTTCACACCAGAACACAGTACAAAATCACTGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGCCAGATTGAGTTGGCGTTGCATGGGCGAAGAACAATATCTGAACTTGAAAATTATCAGCAGATTTACAAATTATTGGATATTGTTCGTTCCATTGCAAATGTTAACAACTCTGGCTATGGTGCATTGGAGTCTATGCTTGATCGGTTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCTCTTGTCGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAAATGGAATCGTCGATGAAGAGAGTTCAGTGGAAGATGATGCTGTTCGTAGTTTACGTGCAAGTCCTGTTAACACATGTTCAAAAGATCGAACATCGATTGAAGATTTTGAAATAATTAAACCAATTAGTAGAGGTGCATATGGTCGAGTTTTCCTTGCCAGAAAACGAGCAACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGTAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATTTGTATCTGGTCATGGAATACCTAAATGGTGGCGATATTTATTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGAATTTATATCGCTGAAATTGTTCTTGCTTTGGAATATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTAACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCACAGGTCCATCAATCAATGGAACTGCTTCACTTGGAGACAATGGTCCAACATCTCAATCTTTGTCAAAAAGAGAACACAGACAAAAGCATTCAGTAGTTGGTACTCCAGACTATTTGGCGCCTGAGATACTTCTAGGCATGGGACATGGTGTAACTGCTGATTGGTGGTCTGTTGGCGTAATCCTTTTCGAGATGCTTGTAGGATTACCGCCGTTCAATGCAGAAAGTCCACAGCAAATTTTTGATAATATCATTAATAGAGACATACCATGGCCCAAGATACCAGACGAGATGAGTCATGAAGCCCATGATTTGATTGACAAATTGCTGACTGAAAATTCTGTTCAAAGACTGGGAGCTACTGGAGCCGGAGAGGTGAAGCAGCATCTTTTCTTTAAAGATATTAACTGGGATACACTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACAGGATACAAGTTATTTCATGAGCCGTTATGTATGGAATCCAGAAGATGAGGATTTTAACTGTGGAAGTGACTTTGATGATCATGATTTGACAGATACTTGCAGCAGTAGTTCACTTAGTAACCAACAAGATGAAGATGGAGACGAATGTGGCAGTTTGGCTGACTTCGGTTCATCATCAGCCCTTTCTGTGAAGTATTCGTTCAGCAATTTCTCTTTCAAGAATTTATCACAATTGGCTTCCATCAATTATGACTTGGTTGTGAAGAGCAGTCAAAACTCACCAGATGTATCCAAGCCATCCATTCCTTGA 3522 42.14 MSQRPPSDHGSSSSVAKLRKIPAIPLLRGSISNAGDSDSDEEYGLDEDFPYEPDDSSIIMASSLGLNHIRTRSGPLPQRTLAAGTPSNLGETSRTNATAGTDPEPKHSSTDHGKKVLWSQSKSFRYPTALNHDFEVNHVAFGKEIQSPRFRAILRVTSGKKKRTLDIKSFSHELNSKGVRPFPVWKPRAFGYLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDTLEKTDRSLPEIREGLEDLLVVARKCATMSPTDFWAKGEGIVQNLDDRRQELPLGVLKQAHTRLLFILTRCTRLIQFRKESGYENEHILGLHQLNDPGIYPEKIRKLEQLDFGDPLTTKEDIEQQLKLVGKDQASRMVKHHSGPSFGSSAGNVDLDSAISNDSSTSTYRMSSWKKLPSAVAKNRKDTDTTETPSKDKLETLHVHEAKTGSINQLDTPSIPIAHSEAPPKEQKLSWGIWGYQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLARVATALDKILESWTPKSTPRSSNVSCGNFDTVKVSTSSMQEDFFELSSKGINLSCQNSEDLLDSLPVTGNSFCMESQDTFPDPSYNRPFNFTPEHSTKSLSAGTLTPRSPLLTPRSSQIELALHGRRTISELENYQQIYKLLDIVRSIANVNNSGYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSNGIVDEESSVEDDAVRSLRASPVNTCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFTGPSINGTASLGDNGPTSQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQQIFDNIINRDIPWPKIPDEMSHEAHDLIDKLLTENSVQRLGATGAGEVKQHLFFKDINWDTLARQKAMFIPSAEPQDTSYFMSRYVWNPEDEDFNCGSDFDDHDLTDTCSSSSLSNQQDEDGDECGSLADFGSSSALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPSIP 1173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9842541 9852390 + CmoCh15G014510.1 Cmo15g01451 398959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01451 1173 Gene3D Transferase(Phosphotransferase) domain 1 845 1067 - -
Cmo15g01451 1173 CDD STKc_MAST_like 767 1054 - -
Cmo15g01451 1173 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 13 1173 - -
Cmo15g01451 1173 MobiDBLite consensus disorder prediction 25 47 - -
Cmo15g01451 1173 SUPERFAMILY Protein kinase-like (PK-like) 758 1079 IPR011009 -
Cmo15g01451 1173 MobiDBLite consensus disorder prediction 78 104 - -
Cmo15g01451 1173 Pfam Protein kinase domain 761 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g01451 1173 MobiDBLite consensus disorder prediction 922 946 - -
Cmo15g01451 1173 MobiDBLite consensus disorder prediction 922 936 - -
Cmo15g01451 1173 MobiDBLite consensus disorder prediction 70 113 - -
Cmo15g01451 1173 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 1173 - -
Cmo15g01451 1173 Gene3D Phosphorylase Kinase; domain 1 759 1076 - -
Cmo15g01451 1173 ProSiteProfiles AGC-kinase C-terminal domain profile. 1050 1153 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cmo15g01451 1173 SMART serkin_6 761 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g01451 1173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Cmo15g01451 1173 ProSiteProfiles Protein kinase domain profile. 761 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01030 Cmo15g01451 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00780 Cmo-Chr1:4055429 Cmo15g01451 Cmo-Chr15:9842541 0 dispersed
Cmo10g00172 Cmo-Chr10:774296 Cmo15g01451 Cmo-Chr15:9842541 2.04E-64 dispersed
Cmo11g00131 Cmo-Chr11:656883 Cmo15g01451 Cmo-Chr15:9842541 1.82E-66 dispersed
Cmo15g01451 Cmo-Chr15:9842541 Cmo08g01054 Cmo-Chr8:6806948 1.78E-83 dispersed
Cmo15g01451 Cmo-Chr15:9842541 Cmo02g01030 Cmo-Chr2:6257676 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74939 PF00069 Pkinase 1.10E-62 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01451 - - csv:101210442 1950.64