Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01482 ATGGAGATTGCTTCATTTTCCTTTCTTCTTCTTCTACCTCTAATCTTCGCCATTCTTAAGCACATCAGTTCATCTTCAAAACAGCCGCCATTTCCTCCGGGTCCAAAGCCATGGCCGATGCTTGGAAATCTCCTTCAGATCGGTCAAAACGCCCACATTTCAATGACCCAATTCTCTCATATCTACGGCCCTTTAATCTCCCTCAAGCTCGGAGCTCAGCGCTTGGTGGTCGCTTCTTCACCGGCCGCCGCCGCCGCCATTCTCAAGACTCAAGATCGCCTTCTATCTGCTCGATACATTTTCCAAATGATACCTGATCGAGCTCTGCACGATAACTGCTCGCTTGTTTTCTCACCGGAATGCGGCGATCGTTGGAAGAATCTGAGATCCATTTGCAGAGCCAAATTGTTTACAGCGAGAGCGATCGAATCCCAAGCCAGTTTGAGAAGGAAGAAGATGAATGAAATGGTGGAGTTCTTGCAGTCAAAACAGGGATCTGTGGTGGAGATTAAAGAATTTGTGTTTATTACTGTTTTCAACACTCTTTCTAACTTCATCTTCTCTAGGGATTTGGTTGGTTTTGTGGGTGATGGGTTCAATGGGATTGAAGGGCATTTCAAGAACGTGATCGATTGGGCTTTGATCCCAAATTTGGCTGACTTTTACCCTTTGCTCAGATGCTTCGATCTTCAAGGACTCCGAAAGAAAGCTGCTATCTATAAGAACCAAATCGATTCTTCGTGGGAAATTCTTATTAAAGAACGAAGAACAATTCATAGTCGAGGCGTTTTAGTTACGAGCGATTTCTTGGATGTTTTGATCCAAAGTGGATTCACCGATGAACAAATTAACTACTTGATTGTTGAAGTGTTGTCCGCCGGCACGGATACAACGACCACGACGGTGGAGTGGGCGATGGCGGAGCTGTTGAAGAACAGAGACATTATGAACAGAGTTCGAGAGGAAACAAAGAAGGCAATCAACGGAGACGCCATTGACGAATCCAAACTCTCTGAGCTTCATTATCTATGGAAATGCGTGAAAGAAACTCTACGGCTGCATCCGCCTGCGCCATTTCTTCTTCCACGGTATGCTCCAGAAGCTTGTGAGCTTATGGGGTACTCTGTTCCTAAACACACCATGATTGTCGTGAATGTTTGGGGGATTGGGCGAGACCCTTCAATCTGGGAAGATCCTCAATCGTTCAAACCAGAAAGATTTGATGTCTGTGATGCAGATTTGAAGGGTCATGATTATCGATTCCTGCCATTTGGAGGAGGCAGAAGGCTTTGCCCTGGGCTTCCCATGGCGGCGGTGCAAGTGCCACTAATCTTAGCCACCTTAATTCACAACTTTGAATGGTGCCTTCCTAATGATGAGGATGCGTCAACGCTGGATTTGAAAGGAAGGCTTGGTGTAACATTACAAAAGGAAGAACCTCTTAAGCTTCTTCCTAAAAGGAGGATTTAA 1470 45.51 MEIASFSFLLLLPLIFAILKHISSSSKQPPFPPGPKPWPMLGNLLQIGQNAHISMTQFSHIYGPLISLKLGAQRLVVASSPAAAAAILKTQDRLLSARYIFQMIPDRALHDNCSLVFSPECGDRWKNLRSICRAKLFTARAIESQASLRRKKMNEMVEFLQSKQGSVVEIKEFVFITVFNTLSNFIFSRDLVGFVGDGFNGIEGHFKNVIDWALIPNLADFYPLLRCFDLQGLRKKAAIYKNQIDSSWEILIKERRTIHSRGVLVTSDFLDVLIQSGFTDEQINYLIVEVLSAGTDTTTTTVEWAMAELLKNRDIMNRVREETKKAINGDAIDESKLSELHYLWKCVKETLRLHPPAPFLLPRYAPEACELMGYSVPKHTMIVVNVWGIGRDPSIWEDPQSFKPERFDVCDADLKGHDYRFLPFGGGRRLCPGLPMAAVQVPLILATLIHNFEWCLPNDEDASTLDLKGRLGVTLQKEEPLKLLPKRRI 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10052721 10054866 + CmoCh15G014820.1 Cmo15g01482 398990

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01482 489 PANTHER (S)-N-METHYLCOCLAURINE 3'-HYDROXYLASE ISOZYME 1-LIKE 5 486 - -
Cmo15g01482 489 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 Gene3D Cytochrome P450 17 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 PANTHER CYTOCHROME P450 71B11-RELATED 5 486 - -
Cmo15g01482 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Cmo15g01482 489 SUPERFAMILY Cytochrome P450 32 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01482 489 Pfam Cytochrome P450 32 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01482 - - - csv:116403724 695.656
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01482 Cmo-Chr15:10052721 Cmo19g00145 Cmo-Chr19:804103 3.38E-103 dispersed
Cmo15g01476 Cmo-Chr15:10023905 Cmo15g01482 Cmo-Chr15:10052721 1.56E-94 proximal
Cmo15g01482 Cmo-Chr15:10052721 Cmo15g01485 Cmo-Chr15:10071738 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g367 . . . . . . . . . . . Cma15g01410 . Car15g01272 . . Cpe05g00314 . . . . . . . . . . . . . . . Cone12ag0321 . . . . . . . . . . . . . . . . Cmo15g01482 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80