Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01485 ATGGAGATTGCTTCATTTTCCTTTCTTCTTCTTCTTCTACCTCTAATCTTCATCATTCTCAGGCACATCAGTTCATCTTCAAAACAGCCGCCACTTCCTCCGGGTCCAAAGCCATGGCCGATTCTTGGAAATCTCCTTCAGATTGGTCAAAACGCCCACATTTCAATGACCCAATTCTCTCATATCTACGGCCCTTTAATCTCCCTCAAGCTCGGAGCTCAGCGCCTGGTGGTCGCTTCTTCACCGGCCGCCGCCGCCGCCATTCTCAAGACTCAAGATCGCCTTCTGTCTGCTCGATACATTTTCCAAATGACCCCTGATCGACCTCTGCACGATAACTGCTCGCTTCTTTTCTCACCGGAATGCGGCGATCGTTGGAAGAATCTGAGATCCATTTGCAGAGCCAAATTGTTTACAGCGAGAGCGATCGAATCCCAAGCCAGTTTGAGAAGGAAGAAGATGAATGAAATGGTGGAGTTCTTGCAGTCAAAACAGGGATCTGTGGTGGAGATTAAAGAACTTGTGTTTATTACTGTTTTCAACACTCTTTCTAACTTCATCTTCTCTAGGGATTTGGTTGGTTTTGTGGGTGATGGGTTCAATGGGATTAAAGGGCCTTTCAAGAACATGATCGATTTGGGTTTGATCCCAAATTTAGCCGACTTTTACCCTTTGCTTAGATGCTTTGATCTTCAAGGACTTCGAAAGAAAGCTGCTATCTACAAAAACCAAGTCGATTCTTCGTGGGAAATTCTTATTAAAGAACGAAGAACAATTCATAGTCAAGGCGAAGTGTTGTCCGCCGGCACGGATACAACGACCACGACGGTGGAGTGGGCGATGGCGGAGCTGTTGAAGAACAGAGACATAATGAACAGAGTGCGAGAGGAAACAAAGAAGGCAATAAACGGAGGCGCCATTGACGAATCAAAGCTCTCTGAGCTTCATTATCTATGGAAATGCGTGAAAGAAACTCTTCGACTGCATCCGCCTGCGCCATTTCTTCTTCCACGGTATGCTCCAGAAGCTTGTGAGCTTATGGGGTACTCTGTTCCTAAACACACCATGATTTTTGTGAACGTTTGGGGGATTGGGAGAGACCCTTCAATCTGGGAAGATCCTCAATCGTTCAAACCAGAAAGATTTGATGGCTGTGATGCAGATTTGAAGGGTCATGATTATCGATTCCTGCCATTTGGAGGAGGCAGAAGGATTTGCCCTGGGCTTCCCATGGCGGCGGTGCAAGTGCCTTTAATCTTAGCCACCTTGATTCATAACTTTGAATGGTGCCTTCCTAATGATGAGGATGCGTCAACGCTGGATTTGAATGGAAGGCTTGGTGTAACATTGCAAAAGGAAGAACCTCTTAAGCTCCTCTCTAAAAACAGGAATTGA 1395 45.95 MEIASFSFLLLLLPLIFIILRHISSSSKQPPLPPGPKPWPILGNLLQIGQNAHISMTQFSHIYGPLISLKLGAQRLVVASSPAAAAAILKTQDRLLSARYIFQMTPDRPLHDNCSLLFSPECGDRWKNLRSICRAKLFTARAIESQASLRRKKMNEMVEFLQSKQGSVVEIKELVFITVFNTLSNFIFSRDLVGFVGDGFNGIKGPFKNMIDLGLIPNLADFYPLLRCFDLQGLRKKAAIYKNQVDSSWEILIKERRTIHSQGEVLSAGTDTTTTTVEWAMAELLKNRDIMNRVREETKKAINGGAIDESKLSELHYLWKCVKETLRLHPPAPFLLPRYAPEACELMGYSVPKHTMIFVNVWGIGRDPSIWEDPQSFKPERFDGCDADLKGHDYRFLPFGGGRRICPGLPMAAVQVPLILATLIHNFEWCLPNDEDASTLDLNGRLGVTLQKEEPLKLLSKNRN 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10071738 10073895 + CmoCh15G014850.1 Cmo15g01485 398993

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01485 464 Gene3D Cytochrome P450 18 262 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PANTHER (S)-N-METHYLCOCLAURINE 3'-HYDROXYLASE ISOZYME 1-LIKE 263 461 - -
Cmo15g01485 464 PANTHER (S)-N-METHYLCOCLAURINE 3'-HYDROXYLASE ISOZYME 1-LIKE 7 262 - -
Cmo15g01485 464 Gene3D Cytochrome P450 263 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS P450 superfamily signature 397 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS P450 superfamily signature 320 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 Pfam Cytochrome P450 33 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 Pfam Cytochrome P450 263 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PANTHER CYTOCHROME P450 71B11-RELATED 263 461 - -
Cmo15g01485 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 399 408 IPR017972 GO:0005506|GO:0016705
Cmo15g01485 464 SUPERFAMILY Cytochrome P450 33 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS E-class P450 group I signature 319 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS E-class P450 group I signature 396 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS E-class P450 group I signature 360 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PRINTS E-class P450 group I signature 406 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g01485 464 PANTHER CYTOCHROME P450 71B11-RELATED 7 262 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01485 - - - csv:116403724 664.07
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01485 Cmo-Chr15:10071738 Cmo19g00145 Cmo-Chr19:804103 1.24E-98 dispersed
Cmo15g01482 Cmo-Chr15:10052721 Cmo15g01485 Cmo-Chr15:10071738 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g394 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo15g01485 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80