Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01487 ATGGCATCTTCTCGAGTGGCTGGAGGATTAGCGCAGTCTTCCTCAAGTTCTGGGATTTTTTTCCAAGGAGATGGGCAGTCCAAGGGTACTATTAAATCTCACTTGGGCTCATCTTATGGAAATTCATCAAATTCAATTCCAGGAGCTGGCCATTCAAATTTTGGTCCTGTTTCTGGGGACACAAATAATGGAGCGTTGAATAGTGTGGCTAACTCAGGACCAAGTGTTGGGGCAAGTTCTTTGGTTACAGATGCCAACTCTGCACTTTCAGGTGGGCCTCACTTGCAGAGAAGTCCAAGCATGAATGCAGAATCATACATGCGATTACCTACATCGCCTATGTCTTTTTCATCAAATAACATGGGTATCTCAGGTGCATCACTCATTGATGCATCTTCTGTAGTGCAGCACAATCCTCAGCAGGATCATAATGCCACTCAATTGCCACAGACCCAGCCACAGGCCCGACAAGTTTCTCCAGGGGATGCATCACTGTCTAATTCACAAACAGCCCAAGCTTCACTCCCCATGGCTGCACGTGTCTCTGGATCGCTGATGACAGATCCCAACAGTTATTCTCAGTTACAGAAGAAACCACGCTTGGATATTAAGCAGGATGATTTCCTGCAACAGCAGATGCTACAACAGCTACTTCAAAGACAAGATTCCATGCAACTGCAAGGTCGTAATACACCTCAGTTACAAGCAGCATTATTTCAGCAGCAACAGAGATTACGGCAGCAGCAACAAATGTTTCAGTCTTTGCCTCCTTTGCAGAGAGCTCATCTGCAGCAGCAGCAGCAGATACAGTTGAGGCAGCAACTTCAACAGCAAGCAATACAACCTGTGAATGCTATGAAGCGGCCTCATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTACCTATACCATCAACGTCAAAGGCCTGCTGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACAGAATATTATTCCCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATAACAATGTTGGTCATCACGCACTTGGTGTTTTCCCTCAAGCAGCCATGGATGCATGGCAGTGTGACATTTGTGGTTCTAAATCTGGACGGGGATTTGAGGCTTCCTTTGAAGTGCTTCCTAGACTAAATGAGATCAAATTTGGCAGTGGAGTAATTGATGAGTTATTGTTCTTGGATATGCCTCGGGAAATCAGATATTCATCTGGAGTTATGATGTTAGAATATGGAAAAGCCGTTCAAGAGAGTGTATATGAGCAACTTCGTGTAGTTCGTGAGGGCCAGCTTCGTATCATATTTACACATGAATTGAAGATATTGGCATGGGAATTTTGTGCAAGACGCCATGAAGAGCTTCTTCCTCGTAGGCTGGTTGCACCTCAGGTGAATCAGCTGGTTCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCCGATGGGGCTTCTCAGCAGGATTTACAAGCAAATAGTAATATGGTTTTGACTGCTGGGCAGCAGCTTGCAAAGAGCCTGGAGTTGCAGTCACTGAATGATTTGGGTTTCTCTAAAAGATACGTTAGATGCTTGCAGATATCAGAGGTTGTCAATAGCATGAAAGATTTGATTGATTTCTGTAAGGAGCAGAAAACAGGACCAGTTGAGGGTTTGAAAAGTTATCCTCAGCACGCTACAGCCAAGCTGCAGATGCAAAAAATGCAAGAGATTGAGCAGGTTGCTACTGCTCAGGGTTTGCCAACCGACCGTAACACCCTTAGTAGAATGGTTGCCCTGCATCCTGGACTGGACAACCAAATGAATAGCCAAAATCAACTAATCGGTAGAGGAGCTTTGAGTGGTTCGGCACAAGCTGCGTTGGCATTGTCTAGCTACCAGAATCTGCTAATGAGACAGTGCTCAATGAATTCAACAAGTTCAAACCCACTCCAGCAGGAGACAACGTCATTCAATAACTCAAACCACCAGAGTCCTTCATCAAGCTTTCATGGGACAACTGCATTATCATCGGCACCAATGCAGAGCTTGCCTGGCAGTGGTCTTTCAAGTCCTAATCTACCACCTCCGCAACAATCTCAGCAATCTCAAGTTCAACAGCAACTGCATCAACGCCCGAACGCCAACAATTTACTTGTGCAAAACCATCCTCAGACTACCCAAGGGAACAGTAACAATAATCAGGCCATGCAACATCAGATGATCCAGCAACTACTCCAGATATCGAATAACAGTGGAGGAGGGCAACAGCGACCACTTCCTGGATCAAACGTGAAAGGAGGAGGAAGCATGACCGGAACTTATACGGGTTTTGGAGGCAGCTCTTCTGTGGTTGCAACAGGCTCAGCCAATGCATCCGGTAGTAATACGCCTGCCCCAACCCGTAGTAGTAGTTTCAAAAATGCTTCAGCTGGTGATGTATCGGCAGCAGCCGGTTCTCGTAGCAGTGAGTTCAACCAAAGAACTGCAGATTTGCCGCAAAATCTTCATCTGGATGAGGATATAATCCAGGATATAGCCCATGATTTTACAGAAAATGGGTTTTTTAACAGTGATCTTGACGATAATATGTGCTTCGCCTGGAAAGGTTAA 2607 45.49 MASSRVAGGLAQSSSSSGIFFQGDGQSKGTIKSHLGSSYGNSSNSIPGAGHSNFGPVSGDTNNGALNSVANSGPSVGASSLVTDANSALSGGPHLQRSPSMNAESYMRLPTSPMSFSSNNMGISGASLIDASSVVQHNPQQDHNATQLPQTQPQARQVSPGDASLSNSQTAQASLPMAARVSGSLMTDPNSYSQLQKKPRLDIKQDDFLQQQMLQQLLQRQDSMQLQGRNTPQLQAALFQQQQRLRQQQQMFQSLPPLQRAHLQQQQQIQLRQQLQQQAIQPVNAMKRPHDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREIRYSSGVMMLEYGKAVQESVYEQLRVVREGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCKEQKTGPVEGLKSYPQHATAKLQMQKMQEIEQVATAQGLPTDRNTLSRMVALHPGLDNQMNSQNQLIGRGALSGSAQAALALSSYQNLLMRQCSMNSTSSNPLQQETTSFNNSNHQSPSSSFHGTTALSSAPMQSLPGSGLSSPNLPPPQQSQQSQVQQQLHQRPNANNLLVQNHPQTTQGNSNNNQAMQHQMIQQLLQISNNSGGGQQRPLPGSNVKGGGSMTGTYTGFGGSSSVVATGSANASGSNTPAPTRSSSFKNASAGDVSAAAGSRSSEFNQRTADLPQNLHLDEDIIQDIAHDFTENGFFNSDLDDNMCFAWKG 868
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10080984 10088849 + CmoCh15G014870.1 Cmo15g01487 398995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01487 868 MobiDBLite consensus disorder prediction 642 708 - -
Cmo15g01487 868 MobiDBLite consensus disorder prediction 135 175 - -
Cmo15g01487 868 MobiDBLite consensus disorder prediction 748 770 - -
Cmo15g01487 868 PANTHER LIM DOMAIN-BINDING PROTEIN 179 715 IPR029005 -
Cmo15g01487 868 PANTHER LIM DOMAIN-BINDING PROTEIN 5 153 IPR029005 -
Cmo15g01487 868 PANTHER LIM DOMAIN-BINDING PROTEIN 714 867 IPR029005 -
Cmo15g01487 868 MobiDBLite consensus disorder prediction 1 60 - -
Cmo15g01487 868 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 179 715 - -
Cmo15g01487 868 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 714 867 - -
Cmo15g01487 868 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 153 - -
Cmo15g01487 868 Pfam LIM-domain binding protein 298 558 IPR029005 -
Cmo15g01487 868 MobiDBLite consensus disorder prediction 787 825 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo15g01487 Cmo18g01250 CCT
Cmo15g01487 Cmo16g00152 CCT
Cmo15g01487 Cmo18g01250 ECH
Cmo15g01487 Cmo16g00152 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00639 Cmo-Chr15:3096562 Cmo15g01487 Cmo-Chr15:10080984 1.73E-113 dispersed
Cmo15g01487 Cmo-Chr15:10080984 Cmo16g00152 Cmo-Chr16:686930 0 dispersed
Cmo15g01487 Cmo-Chr15:10080984 Cmo02g01058 Cmo-Chr2:6446630 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01487 - - bhj:120092747 1318.52