Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01500 ATGAGGACTGGAAACCGGAAGAGGAAGCTGCGGCTGAGCAAGATCTACTCATTTGCTTGTGGAAAATCATCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCGGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAACTCCATCAGCTCTACAAAGTATACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGAATATTAGCCTTCACCCCTCTTGCTCCTTATACTGCTGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATTGCGACAATGGTTAAAGAAGGTATTGAAGATTGGCGACGAAAGGCACAGGATATTGAGGTCAATAATAGAAAGGTTAAGGTTCATCAAGGCAATGGAGTCTTTGATTATACTGAATGGAAATCTTTGCGGGTCGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCAGACCTTCTGTTGATTTCATCCTGCTATGAGGATGGATTCTGTTATGTAGAAACGATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCCTTGGATGCAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGACTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGACTCAAAGGTTATTCAAAATTCTACTGATCCGCCTTCAAAAAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGTTATTAGGCATTCTATTTGTGCTGGCATTTCTTGGATCTATAGTCTTTGGCGTCATGACTAAGGATGATCTGAAAAATGGTAGGTCAAAGAGATGGTATCTTCGACCAGATGACTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCAATTTTTCACTTTCTGACGGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATTCACATGTACTATGAAGAAGGTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACCATACTCTCTGACAAGACTGGCACTTTGACCTGCAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGCAGTGGTGTCACTGAAACTGAGAGAGCTATGGAAGGCAGAAATGGTATGCCAGTGCTTAATGGCAATGGCAATGGAAATGTCTATAAGCACAATGAGAATGCTACAGATACAAATCCCCCTGTCAAAGGCTTTAATTTTAAGGACAGAAGGATTATGAACGGAAACTGGGTTAAGGAACCACATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCCGATGTTGATGAAAACACGGGAAAGATTTCATATGAAGCTGAATCACCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAGTTGGTTTTGAATTCTACCAGAGGACACAGACAAGTATATCAGTTCGTGAATTGGATCCTAGGTCTGGAAGTAAGGTCGAAAGGACATACAAGCTTTTAAATGTTTTGGAGTTTAATAGCGCCCGGAAGAGAATGTCTGTCATAATAAGAGATGAAGATGGAAAAGTACTATTGCTATGCAAAGGTGCCGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGCAGATTTGAAGAGAAAACGAAGGAGCATATCAATGAGTATGCTGATGCAGGCTTACGGACATTGGTACTTGCTTATCGTGAACTTGATGAGGAGGAATACAAGGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAGTTAGTGCAGAGAGGGAGTCATTGATTGATAAAGTAACTGATCGCATTGAAAGGGATTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGCGACAAGATGGAGACTGCGATCAATATTGGTTTTGCATGTAGTTTGCTTCGTCAAGGGATGAAACAGATTATTATAACTCTGGAGACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGCATCGTGCACAAGATCACTCGGGCAAGGTCTCAGCTCACTGCCTCAAGTGGAAGTTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACTTATGCTCTAGAGGATGATGTGAAAAATGCATTCCTTGAGCTTGCCATTGGATGTGCGTCTGTTATTTGCTGTCGCTCATCTCCAAAACAAAAGGCAATGGTCACCAAGTTGGTTAAACTTACAACGGGAAAAACAACATTAGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGTATTGGAATCAGTGGTGCCGAAGGAATGCAGGCAGTCATGTCGAGTGATATAGCAATCGCTCAGTTCAGATATTTGGAGCGTCTACTCCTCGTTCATGGACATTGGTGTTACAGGAGATTATCGTCAATGATATGCTACTTTTTTTACAAGAATTTCACATTTGGTTTTACGATTTTCTTATACGAGGCATACACTTCGTTCTCTGCACAACCTGCATATAACGACTGGTTTATGTCTCTCTACAATGTCGTGTTCTCCGCTCTGCCCGTTGTGGCTCTCGGGGTGTTTGACCAAGATGTATCTGCAAGATACTGCCTTAAGTTTCCTATGTTGTACCAACAAGGTGTGCAGAATGTTCTCTTCAGCTGGCTTCGGATAATCGGCTGGATGTTTAACGGTCTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAGTGGAATGCAGCATCAAGCATTTAACCCCGAGGGTAAGACCGTAGGGAGGGATATTCTCGGGGCGACGATGCTGTCGTGTGTTGTTTGGGTTGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACAATGTTACAAGTTATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTTTTTCTGATGATATATGGAGCCTTCCCTGCCAGCATTTCGACAAATGCATATCGCGTGTTCCTCGAAGCCCTTGCTCCTGCAGGGTCTTATTGGGTTCTGCTGATATTTGTGGTGATCTCTACTCTCATTCCATTCTTTGTATACTCAGCATTGCAGATGAATTTCTTCCCCATGTACCATGAAAAAATACAGTGGATAAGGCACGATGGTCAGGGTCAGATAGATGATCCCGAGTTTGTCAATATGGTCAGGCAAAGCTCGATAAGACCGAGTACTGTCGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGAAAAACCATAG 3591 41.88 MRTGNRKRKLRLSKIYSFACGKSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYTAVSAIIPLIAVIIATMVKEGIEDWRRKAQDIEVNNRKVKVHQGNGVFDYTEWKSLRVGDIVKVEKDQYFPADLLLISSCYEDGFCYVETMNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLLGILFVLAFLGSIVFGVMTKDDLKNGRSKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEGDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPVLNGNGNGNVYKHNENATDTNPPVKGFNFKDRRIMNGNWVKEPHADVIQKFFRLLATCHTAIPDVDENTGKISYEAESPDEAAFVIAAREVGFEFYQRTQTSISVRELDPRSGSKVERTYKLLNVLEFNSARKRMSVIIRDEDGKVLLLCKGADSVMFERLAKNASRFEEKTKEHINEYADAGLRTLVLAYRELDEEEYKEFDRKFYEAKNSVSAERESLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLETPEIQALERTGEKDMITKASKESIVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNAFLELAIGCASVICCRSSPKQKAMVTKLVKLTTGKTTLAIGDGANDVGMLQEADIGIGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTIFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWLRIIGWMFNGLCSALIIFFFCTSGMQHQAFNPEGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTMLQVIFIWASIFIWYLFLMIYGAFPASISTNAYRVFLEALAPAGSYWVLLIFVVISTLIPFFVYSALQMNFFPMYHEKIQWIRHDGQGQIDDPEFVNMVRQSSIRPSTVGFTARLAAKIRREKP 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10177017 10182980 + CmoCh15G015000.1 Cmo15g01500 399008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01500 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1152 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cmo15g01500 1196 SFLD p-type atpase 408 918 IPR044492 -
Cmo15g01500 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
Cmo15g01500 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1144 IPR023298 -
Cmo15g01500 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 1193 - -
Cmo15g01500 1196 CDD P-type_ATPase_APLT_Dnf-like 59 1027 - -
Cmo15g01500 1196 Gene3D - 115 288 - -
Cmo15g01500 1196 Pfam Cation transport ATPase (P-type) 539 629 - -
Cmo15g01500 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Cmo15g01500 1196 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Cmo15g01500 1196 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Cmo15g01500 1196 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Cmo15g01500 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 833 951 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo15g01500 1196 Gene3D - 549 677 IPR023299 GO:0000166
Cmo15g01500 1196 SUPERFAMILY HAD-like 421 922 IPR036412 -
Cmo15g01500 1196 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Cmo15g01500 1196 SFLD Haloacid Dehalogenase 408 918 - -
Cmo15g01500 1196 Gene3D - 699 907 IPR023214 -
Cmo15g01500 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 704 IPR023299 GO:0000166
Cmo15g01500 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01044 Cmo-Chr4:5203567 Cmo15g01500 Cmo-Chr15:10177017 0 dispersed
Cmo04g01623 Cmo-Chr4:8287111 Cmo15g01500 Cmo-Chr15:10177017 0 dispersed
Cmo04g01689 Cmo-Chr4:8563848 Cmo15g01500 Cmo-Chr15:10177017 0 dispersed
Cmo13g01090 Cmo-Chr13:8998731 Cmo15g01500 Cmo-Chr15:10177017 0 dispersed
Cmo15g01500 Cmo-Chr15:10177017 Cmo18g00028 Cmo-Chr18:119077 0 dispersed
Cmo15g01500 Cmo-Chr15:10177017 Cmo18g01081 Cmo-Chr18:11365450 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01500 K01530 - csv:101205800 2253.02