Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g01506 ATGAACCTCAATGTTTTTGTGTTCTGGATCATACAGATCTCCGTCCATGCAGTTCCAGTTGTTTCTGAAACCAAAGCGTCCGACGTTTCTGCATTGAATGTGATGTTTAGCAGTTTAAATTCACCTTCACAACTCTCTCGTTGGAAGTCAAGTGGGGGTGACCCATGTGGGGATTCTTGGGAAGGGATCAAATGCTCAGGATCATCCATCACTGAAATAACTTTATCAAACTTTGAACTGAGTGGAACATTAGGCTACCAGCTTTCAAATTTGGCTTCTGTCACCTCCTTTGATTTGAGCAATAACAACCTGAATGGCGATATCCCTTATCAGCTTCCCCCTAATGCAGTTTCCATCGATCTTTCCACAAACAGCTTCACCGGAAGCGTGCCGTATTCAATATCTCAGATGTCTAATCTTCAAGTTTTAAATCTTGGGCATAATCAGCTGAGCAACCAATTGAGTGACATGTTTGGCAACGTTTCTAAACTCAACAGGATGGATCTCTCATTCAACTCGATTTCAGGAGACTTACCTCTAAGTTTTAAGAATCTTTCAAGCCTTACTGTATTGCATATACAAAATAATGGATTTACAGGTTCTATTAATGTTCTTGCTGATCTTCCACTCAAAGATTTGAGAGTCACAAATAACAAGTTTACTGGATGGATTCCTGATAGCCTTCAGGACATAGATAATTTGGAAACTGGAGGCAATTCATGGTCATCTGGACCAGCTCCTCCTCCACCACCAGGAGATATGGCAAAGAAAAACAAGAACAAAAACGGGTCAAGCAACTCATCCCCAAAAGTAAGTGGAATGGCCATAGCAGGAATAGTGATGGGAGTATTAGCAGTAATCGCCATAATCATAGCATTGTTCTCAAGAAGGTCACCTCCTTCCCACTTTCTTGATGAAGACACAAACCAACACAGCGGATCCTTAACTCCACGCACACCCCATCAACCGTCCAAAGATTTGCACAATAACACTAACAATAATAATGCAATTGAAAGAAAATCATGCACCTCAGATGTCTCTGTTGACATAAAGCCTCTCAGTGGGCTTAGGCCTCCTCCACCTTTTGATGCTGTCAAGCCCTCCGGTGATACTCAGCTTGCAAGCCGCCTCAGTTCCAGGAGGAGCACTTCCGTGCGTGTCATTTCCTACTCATTGGCTGATTTGCAGACTGCTACTGCTAACTTCGCTACTGGTCGCCTTCTTGGTGAGGGCTCAATTGGACGTGTTTACAAGGCCAAGTATGGAGATGGGAAGGTGTTGGCAGTGAAGAAGATTGATTCATCAGTTTTTCAAGGAAGAACAGAGGAGTTTTCTGCAGTAGTTGCTGTCATTTCAAAGCTTCATCACACCAACATTACAGAAGTTGTTGGGTTCTGTTCAGAGCAGGGACAGCACATGTTGGTTTATGAATATTTCATGAATGGCTCACTTTATGAGTTTCTTCACATGTCGGATGACTTCAGTAAGCCACTCACATGGAACACTAGAGTCAAAATTGCTTTGGGGACTGCAAAAGCTCTTCAGTACCTTCACGAGGTTTGCTCGCCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTCGACACGGAACTCAATCCCCGTCTCTCGGACTACGGTTTAGCAGCATTTTACAAGCTAAGAAGTGGAAGGCCTGGAGGTGGATATGATGCACCAGAATGCACACAGGGTTCAAGCTACACAATGAAGAGTGACATTTACAGTTTGGGAGTGGTGATGTTGGAGCTGTTGACCGGGCGGATGCCTTATGACTCTGGGAAGGCAAAGATGGAGCAATGTCTAGTCCGATGGGCAACCCCACAGCTGCATGACATAGATGCATTGGACAAAATGGTAGACCCTGCATTGCGTGGGCTATATCCGCCGAAGTCCGTGTCTAGATTTGCAGATATCATCGCCCTTTGCGTGCAATCGGAGCCTGAATTTCGGCCTCCCATGTCGGAGGTGGTGCAAGCCTTGGTGACTCTGGTTCAACGATCAGCATGA 2034 44.54 MNLNVFVFWIIQISVHAVPVVSETKASDVSALNVMFSSLNSPSQLSRWKSSGGDPCGDSWEGIKCSGSSITEITLSNFELSGTLGYQLSNLASVTSFDLSNNNLNGDIPYQLPPNAVSIDLSTNSFTGSVPYSISQMSNLQVLNLGHNQLSNQLSDMFGNVSKLNRMDLSFNSISGDLPLSFKNLSSLTVLHIQNNGFTGSINVLADLPLKDLRVTNNKFTGWIPDSLQDIDNLETGGNSWSSGPAPPPPPGDMAKKNKNKNGSSNSSPKVSGMAIAGIVMGVLAVIAIIIALFSRRSPPSHFLDEDTNQHSGSLTPRTPHQPSKDLHNNTNNNNAIERKSCTSDVSVDIKPLSGLRPPPPFDAVKPSGDTQLASRLSSRRSTSVRVISYSLADLQTATANFATGRLLGEGSIGRVYKAKYGDGKVLAVKKIDSSVFQGRTEEFSAVVAVISKLHHTNITEVVGFCSEQGQHMLVYEYFMNGSLYEFLHMSDDFSKPLTWNTRVKIALGTAKALQYLHEVCSPSIIHMNIKSSNILLDTELNPRLSDYGLAAFYKLRSGRPGGGYDAPECTQGSSYTMKSDIYSLGVVMLELLTGRMPYDSGKAKMEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSA 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10197461 10203690 - CmoCh15G015060.1 Cmo15g01506 399014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g01506 677 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Cmo15g01506 677 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Cmo15g01506 677 Gene3D Transferase(Phosphotransferase) domain 1 479 675 - -
Cmo15g01506 677 MobiDBLite consensus disorder prediction 303 376 - -
Cmo15g01506 677 Gene3D Ribonuclease Inhibitor 25 271 IPR032675 -
Cmo15g01506 677 Gene3D Phosphorylase Kinase; domain 1 368 478 - -
Cmo15g01506 677 PANTHER OS01G0253100 PROTEIN 19 676 IPR045271 GO:0004714|GO:0006468
Cmo15g01506 677 MobiDBLite consensus disorder prediction 234 269 - -
Cmo15g01506 677 MobiDBLite consensus disorder prediction 305 342 - -
Cmo15g01506 677 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 19 676 - -
Cmo15g01506 677 SUPERFAMILY Protein kinase-like (PK-like) 380 669 IPR011009 -
Cmo15g01506 677 Pfam Protein kinase domain 404 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g01506 677 ProSiteProfiles Protein kinase domain profile. 402 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g01506 677 SUPERFAMILY L domain-like 25 235 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01041 Cmo-Chr4:5192239 Cmo15g01506 Cmo-Chr15:10197461 0 dispersed
Cmo08g00808 Cmo-Chr8:5112712 Cmo15g01506 Cmo-Chr15:10197461 0 dispersed
Cmo15g01506 Cmo-Chr15:10197461 Cmo17g00626 Cmo-Chr17:6571058 0 dispersed
Cmo15g01506 Cmo-Chr15:10197461 Cmo14g01254 Cmo-Chr14:10564460 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74941 PF00069 Pkinase 2.20E-41 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g01506 - - cmax:111468899 1248.8