Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00021 ATGCGGCAACGCCAGGTTTGTCTGCAAGCAGCAGCTCTCCAAAATGGGTTCGTTTGCACACGGAAAGAGCAGCAGCACTACTATCTTCTTGCTCTCGATCATCTGTGTACATTACACATTCGTGTGGCTGCCAAAAGCAACGTGTACATCGTTTATATGGGCCAAAAACCACATGATAATGAAGAACTGCTGGTAAAGGCCCATCATGGAGTTCTTGCCTCTGTCCTTGGGAGTAAATATCAAGATTATATTTTGGAACATACTCCAGCAGAACTAATCTTTGCCTACTTCCGTAGCCAAGAAGGATCTGTAGATTCCCTGGTATATAGCTACAAATATGGATTTTCTGGTTTTGCAGCAAAGCTTACCATGGCTCAAGCACAAATGATCTCAGAGTTGCCTTCAGTGGTTGAAGTCATACCCAATCGTCTTCACAAGATGCAAACAACTAGGAGCTGGGACTACCTTCAACTGTCTCCACGATTTCCAAACTCTCTTCTACGGAAATCAAGAATGGGGAGTGGGGCCATCATTGGTGTCCTTGATACAGGAATCTGGCCCGAGTCTGAAGTTTTCTGTGATGAGGGTCTGGGGCCTGTGCCCTCTAGGTGGAAGGGTATATGCGAGTCAGGAGAGCTCTTCAGTCCAGCCAAGGCTTGTAGCAGAAAGCTAATTGGAGCCCGATATTTCGTCAAGGGGCTGGAAGCTGCATATGGACATCCCTTAAATAATAGTGAGTTCCAAGATTACTGGTCTCCAAGAGATAGATCAGGACATGGCACACATGTCTCTTCCGTCGCTAGTGGCTTCTTTGTGCCCAATGTTAGTTACCATGGGCTAGCTGTTGGAACGGTAAGGGGTGGCGCGCCCCACTCTCGGATTGCTATGTATAAAGTCTGTTGGCAAGTGAATGGAGGAGTATGCGCAGACATAGACATTCTCAAGGCCATCGATCAAGCGATATATGATGGTGTAGATGTACTATCTCTGTCCCTTGGTCCTTCCTTTCCTTCATACTCTGATGTTGACATGCGCAATGGGATTGCAATTGGCGCATTTCATGCTGTGGCGAAGGGAATAGTTGTTGTTGGTGCAGCAGGAAATTCTGGTCCAGCAGCTTACTCTGTCTCTAATATAGAACCATGGTTATTGACAGTCGCTGCAAGTTCTGTCGATTGTTCATTCTTAGTAGCGATTACATTAGGAAACAACTGGACTACCATGGGACAAGGGATGTTCAGCGGAAAATTGACGAAGTTCCACAATTTAGTGTATCCTGAGGTCTCTGATCTGGATGACGAACGCGCTTGCGAATCTCTATCGTTGAATGATACATGGGCAGCTGGAAATGTGGTTCTGTGTTTTGCATCAGATGATTATAATGACGACACACACAATACTTCCTCGTCCGTCAAAAAAGTTGGTGGGTTGGGGCTCATTGTTGCCAAGAATCCTACCAAGGCGGTCGAACCGTTCATAAACAACTTTCCATGCGTTCAAATAAGCCTTGATATTGGAATGCAGATACTCAACTATATCCGCTCCACCAGAAATCCCCAAGTCAAGATTGGTGCTTCAACGACACGTGTTGGTCAGCCATTGTCCACCACTGTGGCCTACTTCTCATCTCGAGGACCTAATTCAGTTGCTCCAGCAATACTGAAGCCAGATATTGCGGCTCCAGGCGTTGCTATTTTAGCTGCTGTTCCTCCGTCTGACCCAAAGGACAGAAATTCTTATGCTTTCATTTCTGGTACATCCATGGCAACTCCTCATGTATCAGCCATTGTTGCCCTTCTCAAAACATTGCACTCTCATTGGTCCCCTGCCGCAATCAAGTCGGCCATTGTTACAACAGCCTGGAGTTCGGATCCATATGGCGCAGTAATATTCGCGGAGGGACAACCAATGATGTCTGCCCGTCCTTTCGATTTTGGAGGTGGAATAGTGAACCCCAATAAAGCAGTGGACCCTGGTCTTGTATACGACATGGGGATGGCAGATTATATTCAGTATTTCTGTGCGAAGGGCTATAACAACTCCGCCATCTCGGGGATTACCAAGAGGTCCATATCTTGCCCCAAAAGACGACCATCTATTTTGGATATAAACGTGCCATCCATAACAATTCCCAGCCTTACTCACCCGGTAAGTCTCACCAGAACTGTCACAAATGTGGGTGCGATCAATTCCTCATACAAGGCTGCCATTGAGGCCCCGCCCGGCATCACCATAGCCGTAAAGCCTCGTATACTAAAATTCAACCACAAGATGAAGAGCATCTCCTTCACCGTTACTATCTCTTCTAATCACAGAGTAACAACCGGATACTGTTTTGGAAGCTTGACTTGGCTGGATGGAGTTCATTCCGTTAGGATCCCAGTTTCTGTAAGAACTAACATTTGA 2406 46.43 MRQRQVCLQAAALQNGFVCTRKEQQHYYLLALDHLCTLHIRVAAKSNVYIVYMGQKPHDNEELLVKAHHGVLASVLGSKYQDYILEHTPAELIFAYFRSQEGSVDSLVYSYKYGFSGFAAKLTMAQAQMISELPSVVEVIPNRLHKMQTTRSWDYLQLSPRFPNSLLRKSRMGSGAIIGVLDTGIWPESEVFCDEGLGPVPSRWKGICESGELFSPAKACSRKLIGARYFVKGLEAAYGHPLNNSEFQDYWSPRDRSGHGTHVSSVASGFFVPNVSYHGLAVGTVRGGAPHSRIAMYKVCWQVNGGVCADIDILKAIDQAIYDGVDVLSLSLGPSFPSYSDVDMRNGIAIGAFHAVAKGIVVVGAAGNSGPAAYSVSNIEPWLLTVAASSVDCSFLVAITLGNNWTTMGQGMFSGKLTKFHNLVYPEVSDLDDERACESLSLNDTWAAGNVVLCFASDDYNDDTHNTSSSVKKVGGLGLIVAKNPTKAVEPFINNFPCVQISLDIGMQILNYIRSTRNPQVKIGASTTRVGQPLSTTVAYFSSRGPNSVAPAILKPDIAAPGVAILAAVPPSDPKDRNSYAFISGTSMATPHVSAIVALLKTLHSHWSPAAIKSAIVTTAWSSDPYGAVIFAEGQPMMSARPFDFGGGIVNPNKAVDPGLVYDMGMADYIQYFCAKGYNNSAISGITKRSISCPKRRPSILDINVPSITIPSLTHPVSLTRTVTNVGAINSSYKAAIEAPPGITIAVKPRILKFNHKMKSISFTVTISSNHRVTTGYCFGSLTWLDGVHSVRIPVSVRTNI 801
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 116359 120087 - CmoCh16G000210.1 Cmo16g00021 399056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00021 801 CDD PA_subtilisin_like 399 523 - -
Cmo16g00021 801 Gene3D Peptidase S8/S53 domain 176 669 IPR036852 GO:0004252|GO:0006508
Cmo16g00021 801 Gene3D - 392 530 - -
Cmo16g00021 801 ProSitePatterns Serine proteases, subtilase family, serine active site. 585 595 IPR023828 -
Cmo16g00021 801 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 39 148 IPR037045 -
Cmo16g00021 801 Pfam Peptidase inhibitor I9 48 143 IPR010259 -
Cmo16g00021 801 PRINTS Subtilisin serine protease family (S8) signature 173 192 IPR015500 -
Cmo16g00021 801 PRINTS Subtilisin serine protease family (S8) signature 584 600 IPR015500 -
Cmo16g00021 801 PRINTS Subtilisin serine protease family (S8) signature 255 268 IPR015500 -
Cmo16g00021 801 ProSiteProfiles Serine proteases, subtilase domain profile. 152 656 - -
Cmo16g00021 801 Pfam Fibronectin type-III domain 702 797 IPR041469 -
Cmo16g00021 801 ProSitePatterns Serine proteases, subtilase family, histidine active site. 259 269 IPR022398 -
Cmo16g00021 801 PANTHER PEPTIDASE S8 28 800 - -
Cmo16g00021 801 CDD Peptidases_S8_3 145 621 IPR034197 -
Cmo16g00021 801 Pfam Subtilase family 173 620 IPR000209 GO:0006508|GO:0008236
Cmo16g00021 801 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 28 800 - -
Cmo16g00021 801 Gene3D - 673 800 - -
Cmo16g00021 801 SUPERFAMILY Subtilisin-like 147 660 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00021 Cmo-Chr16:116359 Cmo16g00649 Cmo-Chr16:3197033 0 dispersed
Cmo16g00021 Cmo-Chr16:116359 Cmo16g01017 Cmo-Chr16:7020890 1.89E-164 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00021 - - qsu:112022505 965.681