Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00021 | ATGCGGCAACGCCAGGTTTGTCTGCAAGCAGCAGCTCTCCAAAATGGGTTCGTTTGCACACGGAAAGAGCAGCAGCACTACTATCTTCTTGCTCTCGATCATCTGTGTACATTACACATTCGTGTGGCTGCCAAAAGCAACGTGTACATCGTTTATATGGGCCAAAAACCACATGATAATGAAGAACTGCTGGTAAAGGCCCATCATGGAGTTCTTGCCTCTGTCCTTGGGAGTAAATATCAAGATTATATTTTGGAACATACTCCAGCAGAACTAATCTTTGCCTACTTCCGTAGCCAAGAAGGATCTGTAGATTCCCTGGTATATAGCTACAAATATGGATTTTCTGGTTTTGCAGCAAAGCTTACCATGGCTCAAGCACAAATGATCTCAGAGTTGCCTTCAGTGGTTGAAGTCATACCCAATCGTCTTCACAAGATGCAAACAACTAGGAGCTGGGACTACCTTCAACTGTCTCCACGATTTCCAAACTCTCTTCTACGGAAATCAAGAATGGGGAGTGGGGCCATCATTGGTGTCCTTGATACAGGAATCTGGCCCGAGTCTGAAGTTTTCTGTGATGAGGGTCTGGGGCCTGTGCCCTCTAGGTGGAAGGGTATATGCGAGTCAGGAGAGCTCTTCAGTCCAGCCAAGGCTTGTAGCAGAAAGCTAATTGGAGCCCGATATTTCGTCAAGGGGCTGGAAGCTGCATATGGACATCCCTTAAATAATAGTGAGTTCCAAGATTACTGGTCTCCAAGAGATAGATCAGGACATGGCACACATGTCTCTTCCGTCGCTAGTGGCTTCTTTGTGCCCAATGTTAGTTACCATGGGCTAGCTGTTGGAACGGTAAGGGGTGGCGCGCCCCACTCTCGGATTGCTATGTATAAAGTCTGTTGGCAAGTGAATGGAGGAGTATGCGCAGACATAGACATTCTCAAGGCCATCGATCAAGCGATATATGATGGTGTAGATGTACTATCTCTGTCCCTTGGTCCTTCCTTTCCTTCATACTCTGATGTTGACATGCGCAATGGGATTGCAATTGGCGCATTTCATGCTGTGGCGAAGGGAATAGTTGTTGTTGGTGCAGCAGGAAATTCTGGTCCAGCAGCTTACTCTGTCTCTAATATAGAACCATGGTTATTGACAGTCGCTGCAAGTTCTGTCGATTGTTCATTCTTAGTAGCGATTACATTAGGAAACAACTGGACTACCATGGGACAAGGGATGTTCAGCGGAAAATTGACGAAGTTCCACAATTTAGTGTATCCTGAGGTCTCTGATCTGGATGACGAACGCGCTTGCGAATCTCTATCGTTGAATGATACATGGGCAGCTGGAAATGTGGTTCTGTGTTTTGCATCAGATGATTATAATGACGACACACACAATACTTCCTCGTCCGTCAAAAAAGTTGGTGGGTTGGGGCTCATTGTTGCCAAGAATCCTACCAAGGCGGTCGAACCGTTCATAAACAACTTTCCATGCGTTCAAATAAGCCTTGATATTGGAATGCAGATACTCAACTATATCCGCTCCACCAGAAATCCCCAAGTCAAGATTGGTGCTTCAACGACACGTGTTGGTCAGCCATTGTCCACCACTGTGGCCTACTTCTCATCTCGAGGACCTAATTCAGTTGCTCCAGCAATACTGAAGCCAGATATTGCGGCTCCAGGCGTTGCTATTTTAGCTGCTGTTCCTCCGTCTGACCCAAAGGACAGAAATTCTTATGCTTTCATTTCTGGTACATCCATGGCAACTCCTCATGTATCAGCCATTGTTGCCCTTCTCAAAACATTGCACTCTCATTGGTCCCCTGCCGCAATCAAGTCGGCCATTGTTACAACAGCCTGGAGTTCGGATCCATATGGCGCAGTAATATTCGCGGAGGGACAACCAATGATGTCTGCCCGTCCTTTCGATTTTGGAGGTGGAATAGTGAACCCCAATAAAGCAGTGGACCCTGGTCTTGTATACGACATGGGGATGGCAGATTATATTCAGTATTTCTGTGCGAAGGGCTATAACAACTCCGCCATCTCGGGGATTACCAAGAGGTCCATATCTTGCCCCAAAAGACGACCATCTATTTTGGATATAAACGTGCCATCCATAACAATTCCCAGCCTTACTCACCCGGTAAGTCTCACCAGAACTGTCACAAATGTGGGTGCGATCAATTCCTCATACAAGGCTGCCATTGAGGCCCCGCCCGGCATCACCATAGCCGTAAAGCCTCGTATACTAAAATTCAACCACAAGATGAAGAGCATCTCCTTCACCGTTACTATCTCTTCTAATCACAGAGTAACAACCGGATACTGTTTTGGAAGCTTGACTTGGCTGGATGGAGTTCATTCCGTTAGGATCCCAGTTTCTGTAAGAACTAACATTTGA | 2406 | 46.43 | MRQRQVCLQAAALQNGFVCTRKEQQHYYLLALDHLCTLHIRVAAKSNVYIVYMGQKPHDNEELLVKAHHGVLASVLGSKYQDYILEHTPAELIFAYFRSQEGSVDSLVYSYKYGFSGFAAKLTMAQAQMISELPSVVEVIPNRLHKMQTTRSWDYLQLSPRFPNSLLRKSRMGSGAIIGVLDTGIWPESEVFCDEGLGPVPSRWKGICESGELFSPAKACSRKLIGARYFVKGLEAAYGHPLNNSEFQDYWSPRDRSGHGTHVSSVASGFFVPNVSYHGLAVGTVRGGAPHSRIAMYKVCWQVNGGVCADIDILKAIDQAIYDGVDVLSLSLGPSFPSYSDVDMRNGIAIGAFHAVAKGIVVVGAAGNSGPAAYSVSNIEPWLLTVAASSVDCSFLVAITLGNNWTTMGQGMFSGKLTKFHNLVYPEVSDLDDERACESLSLNDTWAAGNVVLCFASDDYNDDTHNTSSSVKKVGGLGLIVAKNPTKAVEPFINNFPCVQISLDIGMQILNYIRSTRNPQVKIGASTTRVGQPLSTTVAYFSSRGPNSVAPAILKPDIAAPGVAILAAVPPSDPKDRNSYAFISGTSMATPHVSAIVALLKTLHSHWSPAAIKSAIVTTAWSSDPYGAVIFAEGQPMMSARPFDFGGGIVNPNKAVDPGLVYDMGMADYIQYFCAKGYNNSAISGITKRSISCPKRRPSILDINVPSITIPSLTHPVSLTRTVTNVGAINSSYKAAIEAPPGITIAVKPRILKFNHKMKSISFTVTISSNHRVTTGYCFGSLTWLDGVHSVRIPVSVRTNI | 801 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 116359 | 120087 | - | CmoCh16G000210.1 | Cmo16g00021 | 399056 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00021 | 801 | CDD | PA_subtilisin_like | 399 | 523 | - | - | |
Cmo16g00021 | 801 | Gene3D | Peptidase S8/S53 domain | 176 | 669 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo16g00021 | 801 | Gene3D | - | 392 | 530 | - | - | |
Cmo16g00021 | 801 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 585 | 595 | IPR023828 | - | |
Cmo16g00021 | 801 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 39 | 148 | IPR037045 | - | |
Cmo16g00021 | 801 | Pfam | Peptidase inhibitor I9 | 48 | 143 | IPR010259 | - | |
Cmo16g00021 | 801 | PRINTS | Subtilisin serine protease family (S8) signature | 173 | 192 | IPR015500 | - | |
Cmo16g00021 | 801 | PRINTS | Subtilisin serine protease family (S8) signature | 584 | 600 | IPR015500 | - | |
Cmo16g00021 | 801 | PRINTS | Subtilisin serine protease family (S8) signature | 255 | 268 | IPR015500 | - | |
Cmo16g00021 | 801 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 152 | 656 | - | - | |
Cmo16g00021 | 801 | Pfam | Fibronectin type-III domain | 702 | 797 | IPR041469 | - | |
Cmo16g00021 | 801 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 259 | 269 | IPR022398 | - | |
Cmo16g00021 | 801 | PANTHER | PEPTIDASE S8 | 28 | 800 | - | - | |
Cmo16g00021 | 801 | CDD | Peptidases_S8_3 | 145 | 621 | IPR034197 | - | |
Cmo16g00021 | 801 | Pfam | Subtilase family | 173 | 620 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo16g00021 | 801 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED | 28 | 800 | - | - | |
Cmo16g00021 | 801 | Gene3D | - | 673 | 800 | - | - | |
Cmo16g00021 | 801 | SUPERFAMILY | Subtilisin-like | 147 | 660 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo16g00021 | Cmo-Chr16:116359 | Cmo16g00649 | Cmo-Chr16:3197033 | 0 | dispersed | |
Cmo16g00021 | Cmo-Chr16:116359 | Cmo16g01017 | Cmo-Chr16:7020890 | 1.89E-164 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00021 | - | - | qsu:112022505 | 965.681 |