Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00070 ATGATGGTCGATACGGGTGCATCGGAAAATCGTGCGCCGGTTGTTGATAAGCATCCGGAGAAAGATGAAGATGGTGGTTATGCCAGTGGAGGGTGGAAAAGTGAAGATGGGAAACTTAGTTGGGGGTATTCGAGTCTCCGAGGAAAGAGGGCGACCATGGAAGATTTCTTTGATATTAAAATGTCAAAGGTTGATGGTCAAATAGTCTGCCTTTTTGGCATCTTTGATGGTCATGGTGGATACCGTGCTGCAGAGTTTTTGAAGGACCATCTCTTCGAGAATCTGATAAAGCACCCAAAATTCTTGATAGATACCAAATTAGCTATCAGAGAAACGTATCGACAGACGGATGCTGAATTTTTAAATTCCGAAAAGGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGTTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCGCGTACTATTATATCGAAGGGCGGTGAAGCCATCCCTCTTTCTGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGCGAATTGAAAATGCCGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGAGTGTTAGCGATGTCCCGTGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTGGCGGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACATCGAGCTGCTTGTTCTCGCAAGCGATGGACTTTGGGACGTGGTACGCAACGAGGATGCAGTACTAGTTGCGGGGAAAGAAGAGGGACCTGAGGCAGCTGCTCGGAAACTAACCGAAGCAGCGTTTACCCGTGGTAGCGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCACGACAACGCAAGCACGGGTGTCGAAAACGACTAA 897 46.93 MMVDTGASENRAPVVDKHPEKDEDGGYASGGWKSEDGKLSWGYSSLRGKRATMEDFFDIKMSKVDGQIVCLFGIFDGHGGYRAAEFLKDHLFENLIKHPKFLIDTKLAIRETYRQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDIELLVLASDGLWDVVRNEDAVLVAGKEEGPEAAARKLTEAAFTRGSADNITCIVVKFHHDNASTGVEND 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 317145 320857 + CmoCh16G000700.1 Cmo16g00070 399105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00070 298 MobiDBLite consensus disorder prediction 11 29 - -
Cmo16g00070 298 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Cmo16g00070 298 ProSiteProfiles PPM-type phosphatase domain profile. 40 286 IPR001932 -
Cmo16g00070 298 MobiDBLite consensus disorder prediction 1 31 - -
Cmo16g00070 298 Pfam Protein phosphatase 2C 45 279 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00299 Cmo-Chr11:1438182 Cmo16g00070 Cmo-Chr16:317145 4.96E-34 dispersed
Cmo15g00643 Cmo-Chr15:3121936 Cmo16g00070 Cmo-Chr16:317145 4.33E-112 dispersed
Cmo16g00070 Cmo-Chr16:317145 Cmo11g01995 Cmo-Chr11:13667941 1.91E-55 dispersed
Cmo16g00070 Cmo-Chr16:317145 Cmo18g01333 Cmo-Chr18:12654519 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00070 K17506 - csv:101203681 566.614