Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00079 ATGGCCATCGCCGTGCTCGATGCCCTCGACAACGCTCGGACACAATGGTACCATATTACCGCCATAGTCATTGCCGGGATGGGCTTCTTCACCGACGCCTATGATCTTTTCTGCATCTCAACCGTGTCGAAGCTTCTCGGTCGACTTTACTACTTCGATCCAGATAGTTCGAAGCCGGGAAAACTTCCGAACGCAGTCAACAATGCTGTCGTTGGAGTTGCCCTGGTTGGAACCCTGATGGGGCAACTTTTCTTTGGGTGGTTGGGTGACAAACTTGGGAGGAAGAAAGTCTATGGTGTTACCCTTATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGTTGTCCTTTGGATCAACATCAAAATCAGTGATTGGTACCCTTTGCTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGACTATCCCCTTTCAGCCACCATCATGTCTGAATATGCTAACAAAAAAACTCGAGGGGCTTTCATTGCAGCCGTCTTCGCCATGCAGGGTGTGGGGCTGATATTCGCAGGGCTTGTGTCAATGATTCTATCAAAAATCTTCGTGTCCCTTCACGACGCTCCTTCCTACAAAAGCAACCATGTATTTTCCACACAGCCTCAAGGGGACTTCCTATGGCGGATTGTGTTAATGCTTGGTGCTTTGCCAGCCATCTTAACATACTATTGGCGAATGAAGATGCCTGAGACAGGGCGCTACACCGCCCTTATTGAAGGCAATGCCAAGCAAGCGGCTGCAGACATGGGGAAGGTGTTAGAGATCACAATTCAAGCCGAACAAGACAAGCTTTCTAATTTCAAATCCGCCAATGAATATGGATTGGTGTCTAAGGAGTTCTTTCACCGCCATGGGCTCCATTTGATAGGCACCACCACCACATGGTTCTTGTTGGACATTGCGTTTTATAGCAATAACCTTACACAAAAGGACATCTTCCCAGCAATGAATTTGACAAAGAAACCAGAAGAAGTTAGCGCATTGGAAGAGGTTTATGAAACATCAAAGGCTATGTTTCTTGTTGCATTACTTGGCACATTCCCTGGATATTGGTTCACTGTGTTCCTGATTGAGAAGCTTGGAAGGTTCAAAATTCAATTGATTGGATTCTTCATGATGTCCATTTTCATGGCGGTCCTCGGCATTCGCTACAATTATTTGAAGAATCATCCCGCCGAGTTCGCCCTCCTTTATGGCTTGACGTTCTTCTTTGCCAACTTTGGTCCCAATAGTACCACCTTTGTCCTCCCGGCCGAGCTCTTCCCAACACGGGTTCGGTCGACGTGCCATGCGCTAAGTGCAGCGTCGGGGAAGGCCGGTGCCATCGTTGGAGCTTTCGGGGTGCAAAACTATACGTTAGATGGTAACCCTAGCAAGATTCAAAAGGCCATGATTTTCTTAGCCTTCACCAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACCGAGACGAAAGGCCGATCATTAGAGGAGATCTCCGGCGAGGACGGGGGCGCCGGTGAGCCAGAAACTCAAATGCCAGTGAGATCAATGGGAAAGCCAGGAGCTCAAATGGAAGAAGAAAATTGA 1584 47.79 MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNAVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFVSLHDAPSYKSNHVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLSNFKSANEYGLVSKEFFHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKKPEEVSALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSIFMAVLGIRYNYLKNHPAEFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGAGEPETQMPVRSMGKPGAQMEEEN 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 368539 370311 + CmoCh16G000790.1 Cmo16g00079 399114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00079 527 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 3 508 - -
Cmo16g00079 527 Pfam Sugar (and other) transporter 22 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cmo16g00079 527 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 508 - -
Cmo16g00079 527 TIGRFAM 2A0109: phosphate:H+ symporter 6 500 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cmo16g00079 527 Gene3D MFS general substrate transporter like domains 17 513 IPR036259 -
Cmo16g00079 527 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Cmo16g00079 527 MobiDBLite consensus disorder prediction 495 527 - -
Cmo16g00079 527 CDD MFS_PhT 22 490 - -
Cmo16g00079 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00079 Cmo-Chr16:368539 Cmo17g00165 Cmo-Chr17:963739 0 dispersed
Cmo16g00079 Cmo-Chr16:368539 Cmo06g01332 Cmo-Chr6:9921850 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00079 K08176 - csv:101210631 953.355