Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00079 | ATGGCCATCGCCGTGCTCGATGCCCTCGACAACGCTCGGACACAATGGTACCATATTACCGCCATAGTCATTGCCGGGATGGGCTTCTTCACCGACGCCTATGATCTTTTCTGCATCTCAACCGTGTCGAAGCTTCTCGGTCGACTTTACTACTTCGATCCAGATAGTTCGAAGCCGGGAAAACTTCCGAACGCAGTCAACAATGCTGTCGTTGGAGTTGCCCTGGTTGGAACCCTGATGGGGCAACTTTTCTTTGGGTGGTTGGGTGACAAACTTGGGAGGAAGAAAGTCTATGGTGTTACCCTTATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGTTGTCCTTTGGATCAACATCAAAATCAGTGATTGGTACCCTTTGCTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGACTATCCCCTTTCAGCCACCATCATGTCTGAATATGCTAACAAAAAAACTCGAGGGGCTTTCATTGCAGCCGTCTTCGCCATGCAGGGTGTGGGGCTGATATTCGCAGGGCTTGTGTCAATGATTCTATCAAAAATCTTCGTGTCCCTTCACGACGCTCCTTCCTACAAAAGCAACCATGTATTTTCCACACAGCCTCAAGGGGACTTCCTATGGCGGATTGTGTTAATGCTTGGTGCTTTGCCAGCCATCTTAACATACTATTGGCGAATGAAGATGCCTGAGACAGGGCGCTACACCGCCCTTATTGAAGGCAATGCCAAGCAAGCGGCTGCAGACATGGGGAAGGTGTTAGAGATCACAATTCAAGCCGAACAAGACAAGCTTTCTAATTTCAAATCCGCCAATGAATATGGATTGGTGTCTAAGGAGTTCTTTCACCGCCATGGGCTCCATTTGATAGGCACCACCACCACATGGTTCTTGTTGGACATTGCGTTTTATAGCAATAACCTTACACAAAAGGACATCTTCCCAGCAATGAATTTGACAAAGAAACCAGAAGAAGTTAGCGCATTGGAAGAGGTTTATGAAACATCAAAGGCTATGTTTCTTGTTGCATTACTTGGCACATTCCCTGGATATTGGTTCACTGTGTTCCTGATTGAGAAGCTTGGAAGGTTCAAAATTCAATTGATTGGATTCTTCATGATGTCCATTTTCATGGCGGTCCTCGGCATTCGCTACAATTATTTGAAGAATCATCCCGCCGAGTTCGCCCTCCTTTATGGCTTGACGTTCTTCTTTGCCAACTTTGGTCCCAATAGTACCACCTTTGTCCTCCCGGCCGAGCTCTTCCCAACACGGGTTCGGTCGACGTGCCATGCGCTAAGTGCAGCGTCGGGGAAGGCCGGTGCCATCGTTGGAGCTTTCGGGGTGCAAAACTATACGTTAGATGGTAACCCTAGCAAGATTCAAAAGGCCATGATTTTCTTAGCCTTCACCAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACCGAGACGAAAGGCCGATCATTAGAGGAGATCTCCGGCGAGGACGGGGGCGCCGGTGAGCCAGAAACTCAAATGCCAGTGAGATCAATGGGAAAGCCAGGAGCTCAAATGGAAGAAGAAAATTGA | 1584 | 47.79 | MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNAVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFVSLHDAPSYKSNHVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLSNFKSANEYGLVSKEFFHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKKPEEVSALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSIFMAVLGIRYNYLKNHPAEFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGAGEPETQMPVRSMGKPGAQMEEEN | 527 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 368539 | 370311 | + | CmoCh16G000790.1 | Cmo16g00079 | 399114 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00079 | 527 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 3 | 508 | - | - | |
Cmo16g00079 | 527 | Pfam | Sugar (and other) transporter | 22 | 498 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Cmo16g00079 | 527 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 3 | 508 | - | - | |
Cmo16g00079 | 527 | TIGRFAM | 2A0109: phosphate:H+ symporter | 6 | 500 | IPR004738 | GO:0005315|GO:0006817|GO:0016021 | |
Cmo16g00079 | 527 | Gene3D | MFS general substrate transporter like domains | 17 | 513 | IPR036259 | - | |
Cmo16g00079 | 527 | SUPERFAMILY | MFS general substrate transporter | 9 | 498 | IPR036259 | - | |
Cmo16g00079 | 527 | MobiDBLite | consensus disorder prediction | 495 | 527 | - | - | |
Cmo16g00079 | 527 | CDD | MFS_PhT | 22 | 490 | - | - | |
Cmo16g00079 | 527 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 21 | 491 | IPR020846 | GO:0022857 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo16g00079 | Cmo-Chr16:368539 | Cmo17g00165 | Cmo-Chr17:963739 | 0 | dispersed | |
Cmo16g00079 | Cmo-Chr16:368539 | Cmo06g01332 | Cmo-Chr6:9921850 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00079 | K08176 | - | csv:101210631 | 953.355 |