Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00108 ATGGCGGCCGCCATCTCCGGCGCCTTAGGACCCAGACCACTCCATCTCTTCCTTCCTTCCTCTCATCTCTCCCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTTCAGTCTTCCGGAACAGTAGAATCCAGCAGAAGATAAGGAGAAAAACGCTGTTCACTGTCTGCGTGCTCGTTGAGGATCAAAATAGCTCTGGCGAGGTGGAGAGTCTTTCCGATGAAGAACCGCCGATTGTAGTCCCCCAGATCCCATCGCCTTATGTTGCACAAAGATTGGCAAGGAAGAGATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTATTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTCGGCATGGAGTTTTGGGCGAGATGGGCTCATAGGGCTCTCTGGCACTCTTCCTTGTGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAACTGAACGATGTCTTCGCCATTATCAATGCCGTGCCCGCCATAGCTCTCCTCTCTTACGGCTTCTTCCATAAAGGCCTCGTCCCCGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTATTTTAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCGGACAAGTTCAACGGTGTGCCATATGGACTGTTTTTAGGTCCGAAGGAATTAGAGGAAGTGGGAGGGCAAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATTGACGACAACAAAATCAATCGACGGCTCTTGA 933 50.38 MAAAISGALGPRPLHLFLPSSHLSPKPRTPFLFPPSVFRNSRIQQKIRRKTLFTVCVLVEDQNSSGEVESLSDEEPPIVVPQIPSPYVAQRLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHSSLWHMHESHHKPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGQEELEKEINRRIKLTTTKSIDGS 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 494904 497541 + CmoCh16G001080.1 Cmo16g00108 399143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00108 310 PANTHER BETA-CAROTENE HYDROXYLASE 15 302 - -
Cmo16g00108 310 Pfam Fatty acid hydroxylase 149 276 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cmo16g00108 310 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 15 302 IPR045019 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo16g00108 Cmo18g01298 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g01313 Cmo-Chr15:9019551 Cmo16g00108 Cmo-Chr16:494904 5.28E-124 wgd
Cmo16g00108 Cmo-Chr16:494904 Cmo18g01298 Cmo-Chr18:12476386 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00108 K15746 - csv:101212140 558.91