Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00152 ATGGCATCTTCTCGTCTGGCTGGAGGATTAGCTCAGTCTCCATCAAGTTCTGGGATTTTCTACCAAGGGGAAGGGCAGTCCCCAGCTATTGTTAATTCTCACTTGGGCCAATCATTTGCAAATTCATCAAATTCAATCCCAGGAACTGGATGTTCTGATTTTGGTCCAGTTTCCGGAGACATGAACAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACAGATGCAAACTCTGCCCTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGTTTGCCTGCATCGCCCATGTCATTCAATTCAAATAACATTAGTGTGTCAGGCTCCTCGGTTATTGATGGATCCTGCGTAGTGCAGCAAAATTCTCACCAGGACCAAAATATCCAACACGTGCAGCAACATACACATCAAGGTGCTTCACATGCCACATCTTTACCAACATCACAAATAGGCCAAGTATCATTTCCGATGGGTGCTAAACGTCAGGGATCTTTCATTCCAGATCCAAATAACTATTCTCAGGTGCAGAAGAAACCACGGCTAGATATAAAGCAGGAAGATATGCTGCAACAGCAAGTTTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCTGTCACAAAACCGTAACTCACAATTACAAGCTTTATTTCAACAGCAAAGAATGCGGCAACAGCAGCAAATTTTGCATTCTCTACCTCAGTACAGGGCTCAGTTTCAGCAGCAGCAGCAGATACAGATGAGGCAGCAATTGCAACAACAACAGCAAGCAATGCTGCCAGGATCACCCATGAATCGGCCTTCATATGATACTGGTGGTGTTTGTGCCCGTCGGCTGATGCAATATCTATATCATCTGCGACAAAGACCTCCTGATAATAGTATAGCCTACTGGAGAAAGTTTGTAACAGAGTATTACTCTCCTCGTGCGAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCACGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCATGGCAGTGCGACATCTGTGGTTCCAAATCAGGAAGGGGCTTTGAGGCTACATTTGAAGTACTCCCGAGACTCGGTGAGATCAAATTTGGAAGTGGAGTTATTGATGAGTTTTTAATTCTGGAACGTCCTCAAGAAAGGAGATTATCTTCCGGAATTATGCTGTTAGAATATGCAAAAGCATTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCAGCTTCGTGTAATATTCACGCAAGACTTGAAGATTTTGTCTTGGGAATTTTGTGCACGGCGTCATGAAGAACTTCTTCCACGTAGGTTGGTTGCATCTCAGGTGAATCAGCTGGTACTGGTTGCCCAGAGATGCCAAAGCACAATAGCTGAAAGTGGGCCTGATGGTGTTTCTCAGAAAGATTTGCAGACGAATAGCAATATGGTGCTGGCAGCTGGTCGTCAGCTTGCAAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCCCTAAAAGATACGTGAGGTGTTTGCAGATATCGGAGGTTGTCAACAGTATGAAAGATCTTATTGGTTTCTGCCGGGATCAAAAAGTTGGGCCTATTGAGGGCTTGAAAAATTATCCTAGACATGCCACTGCAGCCAAGCTCAAGATGCAAAAGATGCAGGAGATGGAACAGTTAGCAAGTATTCAAGGTCTTCCCACAACAGTAAATAAGCTGATGGCAATGCATCCTGAACATGATAACCATGGGATTAATAACCATCAGATGATTGGTCGAGGAGGTTTGAGTGGTTCGGCACAAGCTGCTTTGGCAATGACTACGTACCAGAATATCCTCATGAGACAAAGCTCTATGAACTCCAATCCCAGCCCACATCAACAGGAGGCCTTGTCTTCTTTCAATAATTCCAACTATAATCCATCCCCTACACTCCAGGGGAATGCATTCTTGATGCCTGGGTCCATACAGAACTCTGTTGGTAGCTTTTCAAGCGCCCAGCAAACCTTGCAAAAGCAATCGCAGCAGCTGCAACAGCATCCACCAAATGCTGGCTCCTTGGTCCAACAAAATTATCCTCAGACGATTCAAGGCAGCCAGGCCCTACAGCAACAGATGATCCAGGAGCTACTGCAGATGTCAAGTAACAGTAAGAGTGGCGGTTTGCAACAGCCACCCCTTACCGGACCAAATGCAAATAGAAGTTTGACAAGAAGGGGTACGGGTTTTGTGGGAAACACCTCAGTTGCAGCTGTGGCATCTGGAAATCTGCCTGGGAGCAATGTCCCTTGCCCTGGTCCGAGTAGAAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAGTCCTCTGCTGGTAATAGTGGGTTCAATCAAAAGGCTTCTGATTTTCCGGAAGACCTTCATCTGCCAGAAAGTTTGGTTGAAGATATAGGCCAAGATTTCCCTGAAAACGGGTTCCTTAACAATGACCTTGATGATGATTTGGGTTATGTCTGGAAGGCTTGA 2553 45.4 MASSRLAGGLAQSPSSSGIFYQGEGQSPAIVNSHLGQSFANSSNSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSHQDQNIQHVQQHTHQGASHATSLPTSQIGQVSFPMGAKRQGSFIPDPNNYSQVQKKPRLDIKQEDMLQQQVLQQLFQRQDSMLSQNRNSQLQALFQQQRMRQQQQILHSLPQYRAQFQQQQQIQMRQQLQQQQQAMLPGSPMNRPSYDTGGVCARRLMQYLYHLRQRPPDNSIAYWRKFVTEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLGEIKFGSGVIDEFLILERPQERRLSSGIMLLEYAKAFQESVYEQLRVVREGQLRVIFTQDLKILSWEFCARRHEELLPRRLVASQVNQLVLVAQRCQSTIAESGPDGVSQKDLQTNSNMVLAAGRQLAKSLELQLLNDLGFPKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLKMQKMQEMEQLASIQGLPTTVNKLMAMHPEHDNHGINNHQMIGRGGLSGSAQAALAMTTYQNILMRQSSMNSNPSPHQQEALSSFNNSNYNPSPTLQGNAFLMPGSIQNSVGSFSSAQQTLQKQSQQLQQHPPNAGSLVQQNYPQTIQGSQALQQQMIQELLQMSSNSKSGGLQQPPLTGPNANRSLTRRGTGFVGNTSVAAVASGNLPGSNVPCPGPSRSNSFKAASNSESSAGNSGFNQKASDFPEDLHLPESLVEDIGQDFPENGFLNNDLDDDLGYVWKA 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 686930 694509 - CmoCh16G001520.1 Cmo16g00152 399187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00152 850 MobiDBLite consensus disorder prediction 634 706 - -
Cmo16g00152 850 MobiDBLite consensus disorder prediction 773 809 - -
Cmo16g00152 850 MobiDBLite consensus disorder prediction 733 758 - -
Cmo16g00152 850 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 184 843 - -
Cmo16g00152 850 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Cmo16g00152 850 Pfam LIM-domain binding protein 295 555 IPR029005 -
Cmo16g00152 850 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Cmo16g00152 850 PANTHER LIM DOMAIN-BINDING PROTEIN 184 843 IPR029005 -
Cmo16g00152 850 MobiDBLite consensus disorder prediction 773 822 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo15g01487 Cmo16g00152 CCT
Cmo15g01487 Cmo16g00152 ECH
Cmo16g00152 Cmo18g01250 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01058 Cmo-Chr2:6446630 Cmo16g00152 Cmo-Chr16:686930 0 dispersed
Cmo04g02535 Cmo-Chr4:18611539 Cmo16g00152 Cmo-Chr16:686930 2.19E-110 dispersed
Cmo15g01487 Cmo-Chr15:10080984 Cmo16g00152 Cmo-Chr16:686930 0 dispersed
Cmo18g01250 Cmo-Chr18:12274697 Cmo16g00152 Cmo-Chr16:686930 7.62E-47 transposed
Cmo16g00152 Cmo-Chr16:686930 Cmo18g01248 Cmo-Chr18:12272278 1.54E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00152 - - csv:105434391 1326.23