Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00172 | ATGCCGAGAGCGCGGTGCCGTAGAATAGAGATGCGACGATTAGAAACAGTACCGTCGAAGAAACGTGTGCGGAAGACGGACAGCGACGGTTCTCCGGAGATTTCATCTTCTTCGTCATCGGGGGAGGACGTGAAGACTGTAGAAGCTTCACCGTCGGTACCTCAGCCTGTGTTCGGGATGTTGTCGGTGTCCGGAAGGTCACGTGAGATGGAGGATGCAGTATCGACGAGCTTATGCCTTCTAGGTCCAGGAAATTTCCGGCGGCAACCGGTGCATTTCTTCGCCGTCTACGATGGACATGGAGGCCCTCACGTGGCAGCGCTATGTAGGGAGAAGATGCACGTGTTAGTACAAGAGGAATTGGCGCGCGTGGTGAGTGGCGGCGGAGGAAGCAGTGCGGCGGAGGAGGCTAAGGTGGAGGAGGAGGCGACTTGGAAAAGAGTGATGCGGAGGAGCTTTGAGAGAATGGACGAAGTGGCACTCAGTACTTGTGCCTGTGGAAGCATCGGAGGCCAGTGTAGGTGCCATCCAATGGAGGTGGCTCTTGGCGGCTCCACCGCCGTCGTTGCCGTGCTCACCCCGGATCACATAATGGTCGCCAACTGCGGTGACTCACGCGCCGTCCTCTGCCGAGGAGGAAGGGCCATTCCGCTTTCCAATGATCACAAGCCTGATAGAAATGATGAACTAGCAAGAATCGAAGCTGCTGGAGGACGGGTGATTTTCATAAATGGAGCTCGGGTTGAAGGAATCCTGGCAATGTCCCGTGCAATAGAATCATGTCATGTTGGCGAGTGTGTTCCTGCTGGGTGCTCACTGCTCACTGCTCACTCTACTTGA | 840 | 55.83 | MPRARCRRIEMRRLETVPSKKRVRKTDSDGSPEISSSSSSGEDVKTVEASPSVPQPVFGMLSVSGRSREMEDAVSTSLCLLGPGNFRRQPVHFFAVYDGHGGPHVAALCREKMHVLVQEELARVVSGGGGSSAAEEAKVEEEATWKRVMRRSFERMDEVALSTCACGSIGGQCRCHPMEVALGGSTAVVAVLTPDHIMVANCGDSRAVLCRGGRAIPLSNDHKPDRNDELARIEAAGGRVIFINGARVEGILAMSRAIESCHVGECVPAGCSLLTAHST | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 778718 | 784887 | - | CmoCh16G001720.1 | Cmo16g00172 | 399207 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00172 | 279 | ProSiteProfiles | PPM-type phosphatase domain profile. | 57 | 279 | IPR001932 | - | |
Cmo16g00172 | 279 | Pfam | Protein phosphatase 2C | 61 | 258 | IPR001932 | - | |
Cmo16g00172 | 279 | MobiDBLite | consensus disorder prediction | 30 | 46 | - | - | |
Cmo16g00172 | 279 | CDD | PP2Cc | 57 | 258 | IPR001932 | - | |
Cmo16g00172 | 279 | Gene3D | - | 50 | 271 | IPR036457 | - | |
Cmo16g00172 | 279 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Cmo16g00172 | 279 | ProSitePatterns | PPM-type phosphatase domain signature. | 93 | 101 | IPR000222 | GO:0043169 | |
Cmo16g00172 | 279 | SUPERFAMILY | PP2C-like | 52 | 258 | IPR036457 | - | |
Cmo16g00172 | 279 | SMART | PP2C_4 | 47 | 276 | IPR001932 | - | |
Cmo16g00172 | 279 | PANTHER | PROTEIN PHOSPHATASE 2C 75-RELATED | 25 | 259 | - | - | |
Cmo16g00172 | 279 | PANTHER | ALPHABET, ISOFORM E-RELATED | 25 | 259 | - | - | |
Cmo16g00172 | 279 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo16g00172 | Cmo18g01222 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo16g00172 | Cmo-Chr16:778718 | Cmo01g00655 | Cmo-Chr1:3349903 | 4.40E-56 | dispersed | |
Cmo16g00172 | Cmo-Chr16:778718 | Cmo18g01222 | Cmo-Chr18:12126621 | 1.59E-137 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00172 | K14497 | - | csv:101206634 | 395.586 |