Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00173 | ATGGCTCACACTCCTCTGAAATGGCTGTGTTTGCTGCTGGTTTTTGACTGTTTGCTTCTTTCAAGCGCTCAGTTTATGAAAACTTATGTTGTTCAAATGGATAGGTCTGCAATGCCGGACTCATTTTCGGATCATCTTCAGTGGTACTCCACAGTGCTTACCAGTGTGGTCGTTAATCCTGAGAGAGAAGGCAATGGGGGAGGTGAACAGAGGATCATTTACAGTTACCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAATGAAGAAGAGGCAGAGCGGCTCGAGGAAGAAAATGGGGTCTTGGCCATTTTTCCAGAGACCAAGTACGAGCTTCACACCACCAGAAGCCCCAGATTTCTTGGGCTTGAACCAGCTGACAGCAATAGCGCCTGGTCTCAGCAAATTGCAGACCATGACGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGATGCTGGGATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGCGAAACAGGGCGAGACTTCACGAAACAGAATTGTAACAGAAAGATCGTTGGAGCTAGAATGTTCTACCATGGGTATGAAGCTGCAACTGGGAAATTTAACGAACAGTTGGAGTATAAATCTCCAAGGGATCAAGATGGGCATGGAACTCACACGGCAGCCACCGTCGCCGGCTCTCCGACAGCCGGCGCGAACCTCCTCGGTTATGCGTATGGGACGGCCAGAGGAATGGCGCCCGGTGCTAGAATAGCGGCTTACAAAGTCTGTTGGGCCGGCGGCTGTTTTAGCTCCGACATTTTGTCGGCTGTCGACAGAGCTGTGGCCGATGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGCCTCTCCGTTGCAGCATTTGGTGCAATGGAGATGGGCGTGTTTGTGTCCTGTTCGGCCGGAAATGCAGGGCCGGACCCTGTCAGTCTCACAAACGTATCGCCATGGATAACCACTGTCGGTGCCAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCAATGGAAGAACAGTCACCGGCGTTTCACTTTACAAAGGAAGAATCACAATCCCAGAAAGCAAACAATTCCCAGTTGTATACATGGGGAGTAACTCAAGCAACCCGGATCCGAGCTCGCTGTGTTTAGAAGGAACATTAGATCCCCATTTCGTGGCCGGAAAAATCGTGATATGCGATCGTGGAATTAGCCCACGGGTCCAGAAGGGTGTGGTGGTGAAGAATGCAGGTGGGGTTGGGATGATTCTGGCGAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGATTGCCATTTGGTACCTGCCGTCGCCGTCGGTGAAAGAGAAGGTAAAGCAATTAAGCTGTACGCATTGACGAATCGAAAACCGACGGCGACTTTAGGATTTTTAGGGACAAGATTGGGGGTAAGACCCTCGCCGGTGGTGGCGGCATTTTCATCCAGAGGACCAAATTTCCTCACACTTGAGATCCTCAAGCCCGATCTGGTGGCCCCTGGCGTTAACATCCTTGCCGCTTGGACGGGAAAAACAGGGCCATCGAGTTTGACGACGGATACAAGAAGAGTTAAATTCAACATTCTGTCAGGAACCTCAATGTCTTGCCCACACGTCAGTGGCGTAGCAGCTCTGATCAAATCAAAGCATCCCGATTGGAGCCCGTCGGCAATCAAATCGGCACTGATGACCACCGCTTACGTCCACGACAACACCTATAAGCCTCTCAAAGACTCCTCCGGTGCATCGCCGTCGAGTCCGTACGACCACGGCGCCGGCCACATAAACCCAAGAAAAGCCCTAGATCCTGGCTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGAATTCCTCTGTACGCAGGATTTAACCCCTTCACAGCTCAAAGTATTCTCCAAATACTCAAACAGATCTTGTCATCACCTCCTCCCCAACCCTGGAGACTTAAATTATCCGGCCATCTCTGCCGTTTTCCCCGAAAAAACCTCCGTCACTTCCTTGACCCTTCACAGAACCGTCACCAACGTCGGCCCTGCAACCTCCAGTTACCATGCCGTGGTGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACTAGGAGATATCAGAAGCTTTCATACAAAATCACTTTCCTGACGAAGAAGAGACAGAGTATGCCGGAATTCGGAGGATTAATCTGGAAGGACGGAACTCATAGTGTGAGAAGTCCGATTGTGATCACTTGGTTGTCGTTTGTTTGA | 2319 | 50.97 | MAHTPLKWLCLLLVFDCLLLSSAQFMKTYVVQMDRSAMPDSFSDHLQWYSTVLTSVVVNPEREGNGGGEQRIIYSYQNVFHGVAARLNEEEAERLEEENGVLAIFPETKYELHTTRSPRFLGLEPADSNSAWSQQIADHDVIVGVLDTGIWPESESFNDAGMSPVPAHWKGECETGRDFTKQNCNRKIVGARMFYHGYEAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPTAGANLLGYAYGTARGMAPGARIAAYKVCWAGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYKGRITIPESKQFPVVYMGSNSSNPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILANTAANGEELVADCHLVPAVAVGEREGKAIKLYALTNRKPTATLGFLGTRLGVRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSGASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFEFLCTQDLTPSQLKVFSKYSNRSCHHLLPNPGDLNYPAISAVFPEKTSVTSLTLHRTVTNVGPATSSYHAVVTPFNGAAVKVEPESLNFTRRYQKLSYKITFLTKKRQSMPEFGGLIWKDGTHSVRSPIVITWLSFV | 772 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 786400 | 788718 | - | CmoCh16G001730.1 | Cmo16g00173 | 399208 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00173 | 772 | Gene3D | - | 638 | 769 | - | - | |
Cmo16g00173 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 109 | 621 | - | - | |
Cmo16g00173 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 551 | 561 | IPR023828 | - | |
Cmo16g00173 | 772 | Pfam | Fibronectin type-III domain | 668 | 766 | IPR041469 | - | |
Cmo16g00173 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 138 | 157 | IPR015500 | - | |
Cmo16g00173 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 216 | 229 | IPR015500 | - | |
Cmo16g00173 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 550 | 566 | IPR015500 | - | |
Cmo16g00173 | 772 | Pfam | Peptidase inhibitor I9 | 28 | 113 | IPR010259 | - | |
Cmo16g00173 | 772 | Pfam | PA domain | 380 | 468 | IPR003137 | - | |
Cmo16g00173 | 772 | Gene3D | - | 346 | 490 | - | - | |
Cmo16g00173 | 772 | CDD | PA_subtilisin_like | 353 | 482 | - | - | |
Cmo16g00173 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 113 | IPR037045 | - | |
Cmo16g00173 | 772 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 18 | 767 | IPR045051 | - | |
Cmo16g00173 | 772 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.7 | 18 | 767 | - | - | |
Cmo16g00173 | 772 | CDD | Peptidases_S8_3 | 110 | 587 | IPR034197 | - | |
Cmo16g00173 | 772 | SUPERFAMILY | Subtilisin-like | 112 | 625 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo16g00173 | 772 | Pfam | Subtilase family | 139 | 592 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo16g00173 | 772 | Gene3D | Peptidase S8/S53 domain | 140 | 634 | IPR036852 | GO:0004252|GO:0006508 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo16g00173 | Cmo18g01221 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00800 | Cmo-Chr10:3726208 | Cmo16g00173 | Cmo-Chr16:786400 | 0 | dispersed | |
Cmo11g00748 | Cmo-Chr11:3648131 | Cmo16g00173 | Cmo-Chr16:786400 | 0 | dispersed | |
Cmo12g00526 | Cmo-Chr12:3224994 | Cmo16g00173 | Cmo-Chr16:786400 | 0 | dispersed | |
Cmo16g00173 | Cmo-Chr16:786400 | Cmo20g00753 | Cmo-Chr20:3786305 | 0 | dispersed | |
Cmo16g00173 | Cmo-Chr16:786400 | Cmo18g01221 | Cmo-Chr18:12122099 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00173 | - | - | csv:101214825 | 1405.58 |