Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00173 ATGGCTCACACTCCTCTGAAATGGCTGTGTTTGCTGCTGGTTTTTGACTGTTTGCTTCTTTCAAGCGCTCAGTTTATGAAAACTTATGTTGTTCAAATGGATAGGTCTGCAATGCCGGACTCATTTTCGGATCATCTTCAGTGGTACTCCACAGTGCTTACCAGTGTGGTCGTTAATCCTGAGAGAGAAGGCAATGGGGGAGGTGAACAGAGGATCATTTACAGTTACCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAATGAAGAAGAGGCAGAGCGGCTCGAGGAAGAAAATGGGGTCTTGGCCATTTTTCCAGAGACCAAGTACGAGCTTCACACCACCAGAAGCCCCAGATTTCTTGGGCTTGAACCAGCTGACAGCAATAGCGCCTGGTCTCAGCAAATTGCAGACCATGACGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGATGCTGGGATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGCGAAACAGGGCGAGACTTCACGAAACAGAATTGTAACAGAAAGATCGTTGGAGCTAGAATGTTCTACCATGGGTATGAAGCTGCAACTGGGAAATTTAACGAACAGTTGGAGTATAAATCTCCAAGGGATCAAGATGGGCATGGAACTCACACGGCAGCCACCGTCGCCGGCTCTCCGACAGCCGGCGCGAACCTCCTCGGTTATGCGTATGGGACGGCCAGAGGAATGGCGCCCGGTGCTAGAATAGCGGCTTACAAAGTCTGTTGGGCCGGCGGCTGTTTTAGCTCCGACATTTTGTCGGCTGTCGACAGAGCTGTGGCCGATGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGCCTCTCCGTTGCAGCATTTGGTGCAATGGAGATGGGCGTGTTTGTGTCCTGTTCGGCCGGAAATGCAGGGCCGGACCCTGTCAGTCTCACAAACGTATCGCCATGGATAACCACTGTCGGTGCCAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCAATGGAAGAACAGTCACCGGCGTTTCACTTTACAAAGGAAGAATCACAATCCCAGAAAGCAAACAATTCCCAGTTGTATACATGGGGAGTAACTCAAGCAACCCGGATCCGAGCTCGCTGTGTTTAGAAGGAACATTAGATCCCCATTTCGTGGCCGGAAAAATCGTGATATGCGATCGTGGAATTAGCCCACGGGTCCAGAAGGGTGTGGTGGTGAAGAATGCAGGTGGGGTTGGGATGATTCTGGCGAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGATTGCCATTTGGTACCTGCCGTCGCCGTCGGTGAAAGAGAAGGTAAAGCAATTAAGCTGTACGCATTGACGAATCGAAAACCGACGGCGACTTTAGGATTTTTAGGGACAAGATTGGGGGTAAGACCCTCGCCGGTGGTGGCGGCATTTTCATCCAGAGGACCAAATTTCCTCACACTTGAGATCCTCAAGCCCGATCTGGTGGCCCCTGGCGTTAACATCCTTGCCGCTTGGACGGGAAAAACAGGGCCATCGAGTTTGACGACGGATACAAGAAGAGTTAAATTCAACATTCTGTCAGGAACCTCAATGTCTTGCCCACACGTCAGTGGCGTAGCAGCTCTGATCAAATCAAAGCATCCCGATTGGAGCCCGTCGGCAATCAAATCGGCACTGATGACCACCGCTTACGTCCACGACAACACCTATAAGCCTCTCAAAGACTCCTCCGGTGCATCGCCGTCGAGTCCGTACGACCACGGCGCCGGCCACATAAACCCAAGAAAAGCCCTAGATCCTGGCTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGAATTCCTCTGTACGCAGGATTTAACCCCTTCACAGCTCAAAGTATTCTCCAAATACTCAAACAGATCTTGTCATCACCTCCTCCCCAACCCTGGAGACTTAAATTATCCGGCCATCTCTGCCGTTTTCCCCGAAAAAACCTCCGTCACTTCCTTGACCCTTCACAGAACCGTCACCAACGTCGGCCCTGCAACCTCCAGTTACCATGCCGTGGTGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACTAGGAGATATCAGAAGCTTTCATACAAAATCACTTTCCTGACGAAGAAGAGACAGAGTATGCCGGAATTCGGAGGATTAATCTGGAAGGACGGAACTCATAGTGTGAGAAGTCCGATTGTGATCACTTGGTTGTCGTTTGTTTGA 2319 50.97 MAHTPLKWLCLLLVFDCLLLSSAQFMKTYVVQMDRSAMPDSFSDHLQWYSTVLTSVVVNPEREGNGGGEQRIIYSYQNVFHGVAARLNEEEAERLEEENGVLAIFPETKYELHTTRSPRFLGLEPADSNSAWSQQIADHDVIVGVLDTGIWPESESFNDAGMSPVPAHWKGECETGRDFTKQNCNRKIVGARMFYHGYEAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPTAGANLLGYAYGTARGMAPGARIAAYKVCWAGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYKGRITIPESKQFPVVYMGSNSSNPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILANTAANGEELVADCHLVPAVAVGEREGKAIKLYALTNRKPTATLGFLGTRLGVRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSGASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFEFLCTQDLTPSQLKVFSKYSNRSCHHLLPNPGDLNYPAISAVFPEKTSVTSLTLHRTVTNVGPATSSYHAVVTPFNGAAVKVEPESLNFTRRYQKLSYKITFLTKKRQSMPEFGGLIWKDGTHSVRSPIVITWLSFV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 786400 788718 - CmoCh16G001730.1 Cmo16g00173 399208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00173 772 Gene3D - 638 769 - -
Cmo16g00173 772 ProSiteProfiles Serine proteases, subtilase domain profile. 109 621 - -
Cmo16g00173 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Cmo16g00173 772 Pfam Fibronectin type-III domain 668 766 IPR041469 -
Cmo16g00173 772 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cmo16g00173 772 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cmo16g00173 772 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Cmo16g00173 772 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Cmo16g00173 772 Pfam PA domain 380 468 IPR003137 -
Cmo16g00173 772 Gene3D - 346 490 - -
Cmo16g00173 772 CDD PA_subtilisin_like 353 482 - -
Cmo16g00173 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 113 IPR037045 -
Cmo16g00173 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 767 IPR045051 -
Cmo16g00173 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 18 767 - -
Cmo16g00173 772 CDD Peptidases_S8_3 110 587 IPR034197 -
Cmo16g00173 772 SUPERFAMILY Subtilisin-like 112 625 IPR036852 GO:0004252|GO:0006508
Cmo16g00173 772 Pfam Subtilase family 139 592 IPR000209 GO:0006508|GO:0008236
Cmo16g00173 772 Gene3D Peptidase S8/S53 domain 140 634 IPR036852 GO:0004252|GO:0006508
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo16g00173 Cmo18g01221 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00800 Cmo-Chr10:3726208 Cmo16g00173 Cmo-Chr16:786400 0 dispersed
Cmo11g00748 Cmo-Chr11:3648131 Cmo16g00173 Cmo-Chr16:786400 0 dispersed
Cmo12g00526 Cmo-Chr12:3224994 Cmo16g00173 Cmo-Chr16:786400 0 dispersed
Cmo16g00173 Cmo-Chr16:786400 Cmo20g00753 Cmo-Chr20:3786305 0 dispersed
Cmo16g00173 Cmo-Chr16:786400 Cmo18g01221 Cmo-Chr18:12122099 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00173 - - csv:101214825 1405.58