Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo16g00241 | ATGATATCATTATTGAGCAACCACCTTCTTGTTTCAGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGTTTTTTAAGTACCACTCTGCATTCATCCAATGATCCTGACTGCATACAATCAATATCAGGGCACCATATTGCGCCAATTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATTGAACGTGCAGACCCGAGACACTGTACCCTCTTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCAATGGCATTAGAACAAGTGTTATCAGATCGAGATAGCGAAGATGAAGTCGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTCGATGTAACCAAGGACGAGAAGCAAATTATGCATATGTGGAACTCGTTCGTTAGGAAGCAACGGTGCTGGCAGATGGCCATATCCCCTGGGCTTGTGAGGCATTTTCAAAGTTACATGGACCAAACCTTGTCAAAACTCCATCTCTACTATGGTGCTGGAGATTGTTAA | 531 | 42.56 | MISLLSNHLLVSDAQSSKGEKAQISGFLSTTLHSSNDPDCIQSISGHHIAPIMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQIMHMWNSFVRKQRCWQMAISPGLVRHFQSYMDQTLSKLHLYYGAGDC | 176 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 1057073 | 1069453 | - | CmoCh16G002410.1 | Cmo16g00241 | 399276 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo16g00241 | 176 | PANTHER | POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED | 18 | 143 | - | - | |
| Cmo16g00241 | 176 | PANTHER | POLYCOMB GROUP PROTEIN | 18 | 143 | - | - | |
| Cmo16g00241 | 176 | Pfam | VEFS-Box of polycomb protein | 62 | 145 | IPR019135 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo06g00828 | Cmo-Chr6:4510629 | Cmo16g00241 | Cmo-Chr16:1057073 | 1.85E-25 | dispersed | |
| Cmo16g00241 | Cmo-Chr16:1057073 | Cmo04g00382 | Cmo-Chr4:1891511 | 3.55E-42 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo16g00241 | - | - | csv:101213607 | 226.098 |