Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00263 ATGGAGAGTTTTGCCCTCCAATCTGTCTCCACCACCGCTTCCTTGCCCCGCCATTCTCCCATTGCTCGAATTTCTCTCTTCCACCGCCGGAAACCCATTCCCCATTCCCAGTCCTTTCCCACTTCCCCTTGTTTATATCGCTCGGTTTCGCTATTTCAATCAGCCCCACCGATCCCCCAATCCCCCCTTTTCATTTCCCGATCTTCTTCCCTTTTCAATCCGCTTTTCAATCCCAAATTGCGGCGAACCCATCAATTACGAACCAGTGCCTCTCAATCACCGGAGAAGCAGCCACTGCCGCCGACCCCACTTCCCCAACAAGGTGCTAAACCAATCCCTTTTCTGATTTCCATCGCAATTGGTTTAATTGTTCGCTTTGCCATCCCGAAACCGGTGGAGGTTTCTGCCCAAGCGTGGCAGTTGCTCTCGATTTTCTTGTCCACGATTGCTGGACTCGTTTTGAGTCCCTTGCCGGTGGGTGCTTGGGCGTTTCTTGGCCTCACTATGACTGTTGTTACTAAGACTTTGACGTTTGCTTCTGCTTTTAATGCTTTCACTAGTGAGGTGATTTGGTTGATTGTTATTTCATTCTTTTTTGCTCGTGGGTTTGTCAAAACTGGGTTGGGGGATCGAATTGCGACGTATTTTGTTAAATGGATGGGGAAGAGTACGCTTGGTTTATCTTACGGTTTGACGTTCAGTGAGGCATTGATTGCCCCTGCCATGCCCAGCACTACGGCCAGGGCTGGCGGTGTGTTCTTGCCCATTATCAAGTCCTTGTCGCTTGCTGCTGATAGTAAACCCAACGACCCATCGTCTAAAAAGATCGGTGCTTATCTAATTCAGTCTCAGTTTCAGAGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGCTGCTGCTCAAAACTTATTGTGCCTTAAACTGGCTGAAGAACTTGGTGTCCAAATATCTAGCCCCTGGCTTACTTGGGCCAAAATTGCTAGTGTGCCAGCCATCATTTGTCTCTTAACAACTCCAGCAATCTTATACAAGCTGTTTCCTCCCGAAACCAAGAACACACCCGACGCCCCAGCCATGGCGACGAAAAAGTTGGAGGCTATGGGTCCTGTCACCAAAAATGAATGGGTCATGGTCGGTACCATGCTTATTGCAGTCTCGTTATGGATAGCTGGAGAGGCCCTTCAAATTCCTAGTGTTGTAGCTGCAATGATTGGTTTATCAACACTCCTTACACTCGGAGTCCTAAACTGGGAAGACTGCTTAGCCGAAAAGTCGGCCTGGGACACGTTGGCTTGGTTTGCTGTCCTCGTGGGCATGGCGGGCCAATTGACGAGTCTCGGTCTGGTTGGCTGGATGTCCAATTGTGTGGCCACGTTGCTGAAGTCTCTTTCTCTCAGCTGGCCTGCAGCTTTTGCTATTCTTCAGCTATCTTACTTCTTTGTTCACTACCTCTTCGCAAGCCAGACCGGTCACGTCGGAGCTTTATACTCGGCATTCCTTGCGATGCACTTGGCTGCCAAGGTGCCTGGGGTATTGGCAGCTCTCGCCTTAGCTTACAACACGAATCTCTTCGGCGCTCTGACTCATTACAGCAGTGGTCAAGCTGCTGTATACTATGGAGCGGGTTATGTCGACCTACCAGATGTATTCAAAATCGGGTTCGTGATGGCACTCGTAAACGGTATTATCTGGATTGTGGCTGGAGGTATTTGGTGGAAGGTTCTTGGTTTATACTGA 1737 49.34 MESFALQSVSTTASLPRHSPIARISLFHRRKPIPHSQSFPTSPCLYRSVSLFQSAPPIPQSPLFISRSSSLFNPLFNPKLRRTHQLRTSASQSPEKQPLPPTPLPQQGAKPIPFLISIAIGLIVRFAIPKPVEVSAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTMTVVTKTLTFASAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLIQSQFQSAGNSSALFLTAAAQNLLCLKLAEELGVQISSPWLTWAKIASVPAIICLLTTPAILYKLFPPETKNTPDAPAMATKKLEAMGPVTKNEWVMVGTMLIAVSLWIAGEALQIPSVVAAMIGLSTLLTLGVLNWEDCLAEKSAWDTLAWFAVLVGMAGQLTSLGLVGWMSNCVATLLKSLSLSWPAAFAILQLSYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKIGFVMALVNGIIWIVAGGIWWKVLGLY 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1165773 1168877 + CmoCh16G002630.1 Cmo16g00263 399298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00263 578 MobiDBLite consensus disorder prediction 85 105 - -
Cmo16g00263 578 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 83 578 IPR030676 -
Cmo16g00263 578 PANTHER DICARBOXYLIC ACID TRANSPORTER2 83 578 - -
Cmo16g00263 578 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 130 572 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cmo16g00263 578 Pfam Sodium:sulfate symporter transmembrane region 114 577 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01287 Cmo-Chr2:7670439 Cmo16g00263 Cmo-Chr16:1165773 6.99E-159 dispersed
Cmo16g00263 Cmo-Chr16:1165773 Cmo20g00085 Cmo-Chr20:442145 3.38E-157 dispersed
Cmo16g00263 Cmo-Chr16:1165773 Cmo04g00431 Cmo-Chr4:2140957 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00263 - K03319 csv:101213018 983.4