Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00270 | ATGGATAACTTATGCTGCTTCAATTCTGTTTATTCTCAGGTAGTGATATCTTCTCCTTTGGCTGTTTTTATGCACATTCATCTCGATATTACTGATTATGAACTACGAAAGTTTTATTTTGAACTGGGATGTCCCCTTGTCGTTAGAGGTCGTTCGCCTGGTAGCTCTGGAAAGGGCAGGGGCAACCAATGCCCTGCCAGGTATGGCTTTAGCTTAGTAAAAGGGAAAGCAAACCATCCCATGGAAGACTATCATGTTGCTAAATTTATAACAGTGCATGGCCATGAGCTAGGCCTTTTCGCCATATATGATGGACACTTAGGAGACAGTGTACCAGCCTATCTTCAGAAGCATCTATTTCCTAATATACTGAATGATGAGGAATTCTGGTCGAATCCCCGTAGCTCGATCTTTAAGGCTTACGAGACGACAGACCAAGCGATACTCTCACACAGTCCTGACTTGGGAAGAGGTGGATCCACCGCGGTCACTGCAATTTTGATAAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGAGCAGTCCTTTCGAGAAAAGGGCAGGAAGAGCAAATGTCTGTTGATCACGAGCCAAACACCGAGCGAGGAAGTATTGAGGACAGAGGTGGATTCGTCTCTAACATGCCAGGTCTGAAAACTGAATATCTAATGAATCTTCGAACGCCAAATGTTGTTAAATATGGCGGTCGTCGAGTAAAGTGGTTCAGAACTCTGAGCTTGCTATGGTTTTCATTGTTCAACTTCATAATAATGTCTGATTATTTCATAGTGAATGGGCAGCTAGCAGTTTCTAGAGCATTTGGCGACAAGAACCTCAAGACACACTTGCGATCTGATCCCGACATAAAGAATGCTGATATCGACTCCGACACCGAGCTTCTTATCTTAGCAAGTGATGGTCTATGGAAGGTGATGACGAATCAAGAAGCGGTGGATATAGCAAGAAGAACGAAGGATCCGCAGCGAGCAGCAAAACAATTAGCAGCAGAAGCGTTGAAACGGGAAAGCAAAGACGACATCTCGATCATCGTATTTGGAGGTCTGGGTTTGGCCTTTGGGTCTCCTTGGAACACCTGCCTGACATGTATGCAACTGTTCTAA | 1128 | 44.41 | MDNLCCFNSVYSQVVISSPLAVFMHIHLDITDYELRKFYFELGCPLVVRGRSPGSSGKGRGNQCPARYGFSLVKGKANHPMEDYHVAKFITVHGHELGLFAIYDGHLGDSVPAYLQKHLFPNILNDEEFWSNPRSSIFKAYETTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSRKGQEEQMSVDHEPNTERGSIEDRGGFVSNMPGLKTEYLMNLRTPNVVKYGGRRVKWFRTLSLLWFSLFNFIIMSDYFIVNGQLAVSRAFGDKNLKTHLRSDPDIKNADIDSDTELLILASDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDISIIVFGGLGLAFGSPWNTCLTCMQLF | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 1199573 | 1202225 | - | CmoCh16G002700.1 | Cmo16g00270 | 399305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00270 | 375 | PANTHER | PROTEIN PHOSPHATASE 2C | 265 | 353 | IPR015655 | GO:0004722|GO:0006470 | |
Cmo16g00270 | 375 | PANTHER | PROTEIN PHOSPHATASE 2C | 47 | 218 | IPR015655 | GO:0004722|GO:0006470 | |
Cmo16g00270 | 375 | MobiDBLite | consensus disorder prediction | 188 | 206 | - | - | |
Cmo16g00270 | 375 | SUPERFAMILY | PP2C-like | 65 | 353 | IPR036457 | - | |
Cmo16g00270 | 375 | ProSiteProfiles | PPM-type phosphatase domain profile. | 67 | 356 | IPR001932 | - | |
Cmo16g00270 | 375 | PANTHER | PHOSPHATASE 2C FAMILY PROTEIN | 47 | 218 | - | - | |
Cmo16g00270 | 375 | SMART | PP2C_4 | 63 | 354 | IPR001932 | - | |
Cmo16g00270 | 375 | Pfam | Protein phosphatase 2C | 265 | 349 | IPR001932 | - | |
Cmo16g00270 | 375 | Pfam | Protein phosphatase 2C | 76 | 216 | IPR001932 | - | |
Cmo16g00270 | 375 | PANTHER | PHOSPHATASE 2C FAMILY PROTEIN | 265 | 353 | - | - | |
Cmo16g00270 | 375 | CDD | PP2Cc | 67 | 353 | IPR001932 | - | |
Cmo16g00270 | 375 | MobiDBLite | consensus disorder prediction | 188 | 210 | - | - | |
Cmo16g00270 | 375 | Gene3D | - | 54 | 356 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo09g00547 | Cmo-Chr9:2610033 | Cmo16g00270 | Cmo-Chr16:1199573 | 1.19E-136 | dispersed | |
Cmo09g00846 | Cmo-Chr9:4340957 | Cmo16g00270 | Cmo-Chr16:1199573 | 5.08E-102 | dispersed | |
Cmo11g01995 | Cmo-Chr11:13667941 | Cmo16g00270 | Cmo-Chr16:1199573 | 3.35E-96 | dispersed | |
Cmo16g00270 | Cmo-Chr16:1199573 | Cmo09g00390 | Cmo-Chr9:1719359 | 7.49E-54 | dispersed | |
Cmo16g00270 | Cmo-Chr16:1199573 | Cmo04g00421 | Cmo-Chr4:2094354 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00270 | K17506 | - | csv:101214223 | 476.863 |