Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00273 ATGGCTGACGGTGAATTAGAGAGGGGAGAGGTCAATTGTAGGCTTGCTTCCATGGATTCCTCCGAGTCCCGATGGGTATTTCAGGATGAGGATCAATCGGACATCGACGAGGAGGCGGAGGACGAGGAGGACGAGGAGAATGCAGCGCAGCATCGTATGGATTTGGAGTCTGAGGAAGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCCTTCGATGTCGAAGCTCTTGAGGTCCCTGGTGCACATAGAAATGAATACGAGGACTTCAGCGTGGGAAAGAAAATTACTCTTGCTTTTCAAACCCTTGGAGTTGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCTACAAGGCTCCTATTAAGGAAGATGAAGATGTTATTGGGGCATTATCTCTAGTTATCTACACCTTAATCTTGATTTCACTAATCAAGTATGTTCTTGTTGTTCTGCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCAAATCAACTGCCTTCAGATACCCGAATATCACGTTTTAGGTTAAAGGTGCCATCTCCTGAATTGGAAAGATCACTAAGAATAAAGGAAAAACTTGAGGCTTCCCTGACTTTAAAGAAGCTTCTCTTGATGCTTGTTCTTGCTGGAACTTCTATGACGACCTTTAATGTCGGCTGTTGGTGGACTAAAGATTGGAGTGGATGCGATCAATCAAGTGAAATCTGGGCTTATGATTTGTGTGTGGATATGGAGTTGAGGGCTGGATTTTTGCCCCTCATTCGATTTTTGAATACATTCAAAATCCGTTTGTATCTTTTGTATACCATCATTTCCAGTGCATCACTTTGCAACAACGAAACTTGTAGAGTATACTCGAAGCTCATAAAGTATGGATTCTTTGTCTTGTATAATGTTTCTTTGTCAATATCTTATGAGGTTGTGATGATCTCAGTTGCCTGTCTTATAGTTTTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTCTTGGTCCTGCATTATTCATATGGTTTTGTACGCTTGCAGGCATGGGGATTTATAACCTTGTCATATATGATAGCAGTGTCTTAAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTTTATTATGTGCTACAGGTTCGGAGGCAATGTTTGCGGATCTTTGCTATTTCTCTGTGCAGTCAATACAGCTTACGTTTGTGTTTCTTGTCTTGCCTTGTCTTTTATTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCACAATGGAGCTGAGCACGTATTTTTTAATTCTGTTCCCAAAAGTGCCTTTTGGCCAGTTTTTTTCATTGCTAATGTTGCTGCATTAATTGCGTGTCGAGCAATGACTACGGCTACCTTTTCGTGTATAAAACAATCAACGGCACTTGGTTGTTTTCCTCGTCTTAAGATCATTCATACATCTAGGAAATTCATGGGGCAAATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCAGTTTGCCTGGTGGTTGTCTGCTCCATTTCTAGCATGTACGAGATTGGAAACGCATATGGTATCGCTGAGCTCGGAGTGATGATGATGACTACTGTCTTGGCAACCATTGTTATGCTTCTTATATGGCAGATAAACATTATCATTGTAATGGGTTTTGCGATGATCTTTCTTGGGATGGAACTGATATTTTTCTCGTCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTCGCAGTGATTATGTTCTTCATTATGTATATTTGGAACTACGGAAGCAAGCTCAAATATGAAACTGAAGTGAAGCAAAAGCTGTCAATGGATTTAATGCGGGAGCTTGGGTGCAACCTTGGGACACTCAGAGCTCCTGGCATCGGTTTGCTATATAATGAACTAGTGAAAGGAATACCTGCAGTATTTGGCCAGTTTCTGACTACTCTTCCTGCAGTTCATTCAATGATCATATTTGTCTGCATCAAGTACGTACCGGTTCCTGTCGTGCCTCAGAGTGAGAGATTTCTGTTCCGCCGAGTCTGCCCGAAGAGCTATCACATCTTTCGTTGCATTGCCAGGTACGAAAACTCAATTTCCATAAGAAATGTGGCTGCAACGCCTTCATTTTGGTTGATCTTCTCATCAAAAAGATAA 2277 41.72 MADGELERGEVNCRLASMDSSESRWVFQDEDQSDIDEEAEDEEDEENAAQHRMDLESEEEDNVEQKLIRTGPRIDSFDVEALEVPGAHRNEYEDFSVGKKITLAFQTLGVVFGDVGTSPLYTFSVMFYKAPIKEDEDVIGALSLVIYTLILISLIKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISRFRLKVPSPELERSLRIKEKLEASLTLKKLLLMLVLAGTSMTTFNVGCWWTKDWSGCDQSSEIWAYDLCVDMELRAGFLPLIRFLNTFKIRLYLLYTIISSASLCNNETCRVYSKLIKYGFFVLYNVSLSISYEVVMISVACLIVLFSVQKYGTSKVGLALGPALFIWFCTLAGMGIYNLVIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATGSEAMFADLCYFSVQSIQLTFVFLVLPCLLLGYLGQAAYLISNHNGAEHVFFNSVPKSAFWPVFFIANVAALIACRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLATIVMLLIWQINIIIVMGFAMIFLGMELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTLRAPGIGLLYNELVKGIPAVFGQFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYENSISIRNVAATPSFWLIFSSKR 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1224915 1231134 + CmoCh16G002730.1 Cmo16g00273 399308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00273 758 Coils Coil 39 59 - -
Cmo16g00273 758 Pfam K+ potassium transporter 328 735 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo16g00273 758 Pfam K+ potassium transporter 104 240 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo16g00273 758 MobiDBLite consensus disorder prediction 46 63 - -
Cmo16g00273 758 MobiDBLite consensus disorder prediction 31 45 - -
Cmo16g00273 758 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 25 736 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo16g00273 758 MobiDBLite consensus disorder prediction 19 63 - -
Cmo16g00273 758 PANTHER POTASSIUM TRANSPORTER 7 25 736 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00273 Cmo-Chr16:1224915 Cmo04g02031 Cmo-Chr4:10959569 5.93E-52 dispersed
Cmo16g00273 Cmo-Chr16:1224915 Cmo04g00419 Cmo-Chr4:2077457 1.67E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00273 - - csv:101214942 777.319