Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo16g00274 | ATGTTCGAGCAGCTCTTAATTGAAAGCCTCGAGAAATTCATCCGTCGAGAAGCACAAGAAAGGTCGTTAGAGAGCGAGGGAGACGATGATACTGATTCCAACGAAATCCACAGCTCTCGACTTCTTGTTGGTCCAAATGGAAGTGTCTATTCACTTGGCATTCCTCTGCTTGCTGAATTCAACGAGGCTAGACCTATAAGTGAAGTCATCCACGTCCCAGAAGTGCAGGCAGTGGAATCTCTAGATCCCTCAATCCCAGATGCAGAACAATCACTTGAGAGAGAGCTTTCTTTTATACGAAAGGCTAAAGAATCTGGAGTGGTTTACCTTCTCGGCCATGGAGATATTAGAGCCAGAAAGGATTCTTGGTTTATTAAGAAGCTAGTGATCAATTACTTCTACGCATTTTTAAGAAAGAACAGCCGGCGGGGCATTGCCAACTTGAGTGTCCCCCATACCCACCTGATGCAGGTTGGCATGACATACATGGTTTAG | 495 | 45.25 | MFEQLLIESLEKFIRREAQERSLESEGDDDTDSNEIHSSRLLVGPNGSVYSLGIPLLAEFNEARPISEVIHVPEVQAVESLDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 1231457 | 1231951 | + | CmoCh16G002740.1 | Cmo16g00274 | 399309 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo16g00274 | 164 | PANTHER | POTASSIUM TRANSPORTER | 2 | 163 | - | - | |
| Cmo16g00274 | 164 | MobiDBLite | consensus disorder prediction | 20 | 39 | - | - | |
| Cmo16g00274 | 164 | PANTHER | OSMOTIC STRESS POTASSIUM TRANSPORTER | 2 | 163 | IPR003855 | GO:0015079|GO:0016020|GO:0071805 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo16g00274 | Cmo-Chr16:1231457 | Cmo04g02031 | Cmo-Chr4:10959569 | 3.43E-35 | dispersed | |
| Cmo16g00274 | Cmo-Chr16:1231457 | Cmo04g00419 | Cmo-Chr4:2077457 | 1.10E-94 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo16g00274 | - | - | csv:101214942 | 290.426 |